Sorex araneus (European shrew): 101552727
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Entry
101552727 CDS
T07854
Symbol
TRIP12
Name
(RefSeq) E3 ubiquitin-protein ligase TRIP12 isoform X1
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
sara
Sorex araneus (European shrew)
Pathway
sara04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
sara00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
101552727 (TRIP12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sara04121
]
101552727 (TRIP12)
Enzymes [BR:
sara01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
101552727 (TRIP12)
Ubiquitin system [BR:
sara04121
]
Ubiquitin ligases (E3)
HECT type E3
101552727 (TRIP12)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
WWE
UNC45-central
HEAT_2
HEAT_Maestro
Motif
Other DBs
NCBI-GeneID:
101552727
NCBI-ProteinID:
XP_004610858
LinkDB
All DBs
Position
Unknown
AA seq
2040 aa
AA seq
DB search
MSNRPNNNPGGSLRRSQRNTAGAQPQDDSIGGRSHLGQAKHKGYSPPESRKSNSKAPKVQ
SNTTSELSRGHLSKRSCSSSSAVIVPHPEDPDRANTSERQKTGQVPKKDNSRGVKRSASP
DYNRTNSPSSAKKPKALQHTESPSETSKPHTKSKKRHLEQEQQLKSAQLPSTSKAYTRKS
GATGSSRSQKRKRTESSCIKSGSVSESTGAEEKSAKPTKLASKSAASAKAGCSTITDSSS
AASTSSSSSTVASASSTVPPGARVKQGKDQNKARRSRSASSPSPRRSSREKEQSKTGGSS
KFDWAARFSPKVSLPKTKLSLPGSSKSETSKPGPSGLQAKLASLRKSTKKRSESPPAELP
SLRRSTRQKTTGSCASASRRGSGLGKRGTADARRQEKMADPESNQETVNPSAARTDETPQ
GAAASSSVAGAVGMTTSGESESDDSEMGRLQALLEARGLPPHLFGPLGPRMSQLFHRTIG
SGASSKAQQLLQGLQASDESQQLQAVIEMCQLLVMGNEETLGGFPVKSVVPALITLLQME
HNFDIMNHACRALTYMMEALPRSSAVVVDAIPVFLEKLQVIQCIDVAEQALTALEMLSRR
HSKAILQAGGLADCLLYLEFFSINAQRNALAIAANCCQSITPDEFHFVADSLPLLTQRLT
HQDKKSVESTCLCFARLVDNFQHEENLLQQVASKDLLTNVQQLLVVTPPILSSGMFIMVV
RMFSLMCSNCPTLAVQLMKQNIAETLHFLLCGASNGSCQEQIDLVPRSPQELYELTSLIC
ELMPCLPKEGIFAVDSMLKKGNAQNTDGAIWQWRDDRGLWHPYNRIDSRIIEQINEDTGT
ARAIQRKPNPLANTNTSGYSELKKDDARAQLMKEDPELAKSFIKTLFGVLYEVYSSSAGP
AVRHKCLRAILRIIYFADAELLKDVLKNHAVSSHIASMLSSQDLKIVVGALQMAEILMQK
LPDIFSVYFRREGVMHQVKHLAESESLLTSPPKSCPNGSGSLGSTTSVSSGTATAASNAA
ADLGSPSLQHSRDDSLDLSPQGRLSDVLKRKRLPKRGPRRPKYSPPRDDDKVDNQAKSPT
TTQSPKSSFLASLNPKTWGRLSAQSNSNNIEPARTAGVSGLARAASKDTISNNREKIKGW
IKEQAHKFVERYFSSENMDGSNPALNVLQRLCAATEQLNLQVDGGAECLVEIRSIVSESD
VSSFEIQHSGFVKQLLLYLTSKSEKDAVSREIRLKRFLHVFFSSPLPGEEPIGRVEPMGN
APLLALVHKMNNCLSQMEQFPVKVHDFPSGNGTGGSFSLNRGSQALKFFNTHQLKCQLQR
HPDCANVKQWKGGPVKIDPLALVQAIERYLVVRGYGRVREDDEDSDDDGSDEEIDESLAA
QFLNSGNVRHRLQFYIGEHLLPYNMTVYQAVRQFSIQAEDERESTDDESNPLGRAGIWTK
THTIWYKPVREDEESNKDCVGGKRGRAQTAPTKTSPRNAKKHDELWHDGVCPSVSNPLEV
YLIPTAPENITFEDPSLDVILLLRVLHAISRYWYYLYDNAVCKEIIPTNEFINSKLTAKA
NRQLQDPLVIMTGNIPTWLTELGKTCPFFFPFDTRQMLFYVTAFDRDRAMQRLLDTNPEI
NQSDSQDSRVAPRLDRKKRTVNREELLKQAESVMQDLGSSRAMLEIQYENEVGTGLGPTL
EFYALVSQELQRADLGLWRGEEVTLSNPKGSQEGTKYIQNLQGLFALPFGRTAKPAHIAK
VKMKFRFLGKLMAKAIMDFRLVDLPLGLPFYKWMLRQETSLTSHDLFDIDPVVARSVYHL
EDIVRQKKRLEQDKSQTKESLQYALETLTMNGCSVEDLGLDFTLPGFPNIELKKGGKDTP
VTIHNLEEYLRLVIFWALNEGVSRQFDSFRDGFESVFPLSHLQYFYPEELDQLLCGSKAD
TWDAKTLMECCRPDHGYTHDSRAVKFLFEILSSFDNEQQRLFLQFVTGSPRLPVGGFRSL
NPPLTIVRKTFESTENPDDFLPSVMTCVNYLKLPDYSSIEIMREKLLIAAREGQQSFHLS
NT seq
6123 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaccggcctaataacaatccaggggggtcactgcgacgttcacagaggaacacc
gccggggcccagccacaagacgactcaataggaggaaggtcacatttagggcaggcaaaa
cataagggatatagccctcctgagagtagaaaatctaattctaaggcacccaaagtgcag
tctaatactacttctgaactgtcaaggggacacctttctaaaagaagctgcagttcatca
tctgctgttatagttccacacccagaggatccagacagagccaatacttcggaaaggcaa
aaaacggggcaggtgcctaagaaagacaattctcgaggagtgaaacgcagtgctagtcca
gactacaacaggaccaattctcctagctctgctaaaaaacccaaagcacttcagcatact
gagtctccgtcagaaacgagtaagccgcatactaagtcaaagaagagacatttggaacaa
gagcaacaactgaaatctgcacaattgccatcaacaagcaaggcttacaccagaaagagt
ggggctactggtagttcacgaagccagaaaagaaagaggaccgagagttcttgtataaag
agtggttctgtgtctgagtcaactggtgccgaagagaaatctgcaaaacctaccaagctg
gcttcaaaatcagccgcctcagccaaagctgggtgtagcaccatcaccgattcttcttct
gctgcctcaacttcctcctcctcttctactgtagcctcggcctcctccactgtaccacca
ggtgccagggtgaagcagggaaaagaccagaacaaggccaggcgttctcgttcggcatcc
agtcccagtcccagaagaagtagcagggaaaaggaacagagtaaaactggtggctcttca
aaattcgattgggctgctcgtttcagccctaaagttagccttcctaaaacaaaactgtct
cttccagggtcttctaagtcagagacatcaaaacctggaccttctggattacaggccaaa
ctagcaagtttaagaaaatctaccaagaagcgcagtgaatccccacctgctgagctcccc
agtttgaggcggagcacacgccaaaagaccacgggctcctgtgctagcgccagtcggcga
ggctctggcctgggcaagagaggaacagcggacgctcgtcgacaggagaaaatggcagac
cctgagagtaaccaggagacagtaaatccttcagctgcacggacggacgaaactccccag
ggagcagcagcttccagttctgttgcgggagctgtgggcatgaccacctctggggaaagt
gagtcagatgattcggagatgggacgattacaagctctattagaagccagaggccttcca
cctcacctctttggtcctcttggtcctcggatgtcacagcttttccatagaacaattgga
agtggagctagttctaaggcccagcagcttctccagggactgcaagccagtgatgaaagt
cagcagctccaggccgtgattgagatgtgtcagttactggtcatgggcaatgaggagaca
ctgggagggtttcctgtcaaaagcgtcgttcccgctttgataacattattgcagatggag
cataattttgatattatgaaccatgcctgtcgagccttaacatacatgatggaagcactt
cctcgctcatctgctgttgtagtcgatgcaattcccgtgtttttggaaaagctgcaagtg
attcagtgtatcgatgtggcagagcaggccctgactgccttggagatgttatctcggaga
cacagtaaagccattctccaggcaggtggtttggcagactgcctgctgtatctcgagttc
ttcagcattaatgcccaaagaaatgcactagcaattgcagccaattgttgccagagtatc
acgccggatgaatttcattttgtggcagattcccttccattgcttacccaaaggctcacc
catcaggacaaaaagtcagtggaaagcacttgcctttgttttgcacgtctggtggacaac
ttccaacatgaagagaatttgctccagcaggttgcctccaaagatctgcttacaaatgtt
caacaactactggtagtgactccaccaattttaagctctgggatgttcataatggtagtt
cgcatgttttctctcatgtgttccaactgtccgactctagctgttcaacttatgaagcaa
aacattgcagaaacacttcattttctcttgtgtggtgcctccaatggaagttgtcaggaa
cagattgatcttgttccacgaagtcctcaagaactgtatgaattgacatctctgatttgc
gaactcatgccatgtttacccaaggaaggcatttttgctgttgatagcatgctgaagaag
ggaaatgcgcagaacacagacggagcgatatggcagtggcgagacgaccggggcctctgg
catccctacaacaggattgacagccggatcattgagcaaatcaatgaggacacgggaaca
gcacgtgccattcagagaaaacctaaccccttagccaatactaacactagtggatattca
gagttaaagaaggatgatgctcgagcacagcttatgaaagaggatccggaactggctaag
tcttttattaagacattgtttggtgttctttatgaagtgtatagttcctcagcaggacct
gcggtcagacataagtgccttagagcaattcttaggataatttattttgcggatgctgaa
cttctgaaggatgtcctgaaaaatcatgctgtttcaagtcacattgcttccatgctatca
agccaagacttgaagatagtagttggagcacttcagatggcagaaatcttaatgcagaag
ttacctgatatttttagtgtttacttcagaagagaaggtgtaatgcatcaagtgaaacac
ctagcagaatcagagtctttgttgacgagtccaccaaagtcatgtcctaatgggtcagga
tccttggggtccacgacctctgtcagcagtgggacagccaccgctgccagtaacgccgca
gcggatttgggatcccccagcttacagcacagcagagacgattctttagatctgagccct
caaggtcgattaagtgatgttctaaagagaaaacgactgccaaaacgggggccaagaagg
ccaaagtattcacctccaagagatgatgacaaagtagacaatcaagctaagagccccact
actactcagtctccgaaatcttcttttctggcgagcttgaatccaaaaacatggggaaga
ttaagtgcacagtccaacagcaacaacattgaaccagcgcgaactgcaggagtgagtggt
cttgcccgggctgcctcgaaggacaccatatccaataatagggaaaaaattaaaggttgg
attaaggagcaggcgcataaatttgtagagcgttacttcagttcagagaatatggatgga
agtaaccctgcactgaatgttcttcagagactttgtgctgcaactgaacaactcaacctc
caggtggatggtggagctgagtgccttgtagaaatccgtagcatagtctcagagtcagat
gtttcatcatttgaaatacagcatagtggatttgtgaagcagctgttactttatttgaca
tctaaaagtgaaaaggatgctgtgagcagagagatcagattaaaaagatttcttcatgta
tttttttcttctccacttcctggagaagagcccattggaagagtagaaccaatgggtaac
gcacctttgttggcattagttcacaagatgaacaactgcctcagccaaatggaacagttt
cctgtcaaagtacatgacttccccagtggaaatgggacaggaggcagcttttctctcaac
agaggatcacaggctttaaaattttttaacacgcatcagttaaaatgccagttacaaaga
catccagactgtgcgaatgtgaagcagtggaagggtggacctgtcaagatcgaccctctg
gctttggtgcaagctattgagagataccttgtagttagagggtatggaagagtgagagaa
gatgatgaagacagtgatgatgacggctccgatgaggaaatagatgagtctctggctgct
cagttcttaaattccggaaacgtaagacacagacttcagttctacatcggagaacatttg
ctcccatacaacatgacggtgtaccaggcagtgcggcagttcagtattcaggccgaggat
gagcgggagtccacggatgacgagagcaatcctctgggaagagctggtatttggacaaag
acacatacgatatggtacaagcctgtgagagaggatgaagaaagtaataaagattgtgtt
ggtggtaaaagaggaagagcccagacagctccaacaaaaacttccccaagaaatgcaaaa
aagcatgatgagctttggcatgatggagtatgtccatcagtgtcaaatcctttagaagtt
tatcttatacccacggcgcctgaaaatataacttttgaagacccgtcattagatgtgatt
ctcctcttaagagttctacatgctatcagtcgatactggtattatttgtatgataatgca
gtatgtaaggagattattccaactaatgaatttattaatagtaagttgacagcaaaggca
aataggcagcttcaagatcctttagtaatcatgacaggaaacatcccaacatggcttact
gaactaggaaaaacctgcccatttttcttcccttttgatacccggcaaatgctattttat
gtaactgcatttgatcgggatcgagcaatgcaaagattacttgataccaacccagaaatc
aaccagtctgattctcaagatagcagagttgctccaagattggataggaaaaaacgcact
gtgaacagagaggaactgctgaagcaggccgagtcagtgatgcaggatctcggcagctcc
cgggccatgttggaaatccagtatgaaaatgaggttggtacaggtcttggacccacactg
gagttttatgcacttgtatctcaggaactgcagagagctgacttgggtctctggagaggt
gaagaagtaacacttagcaatccaaaaggaagccaggaagggaccaagtatattcaaaac
ctccagggcctatttgcgcttccctttggtaggacagctaagccagctcacattgcgaag
gtcaagatgaagtttcgtttcttaggaaaattaatggccaaggctatcatggatttcaga
ttggtggaccttccccttggcctacccttttataagtggatgttgaggcaagaaacttca
ctgacatcgcacgatttgtttgacattgacccagttgtagccagatcagtgtatcactta
gaagacattgtcaggcagaagaaaagacttgaacaagataaatctcagaccaaagagagt
ctacaatatgcattagaaactctaactatgaacggctgctcggttgaagatctaggcttg
gatttcactctgccagggtttcccaacatcgaactgaagaaaggaggaaaggatacacca
gtcacgatccacaacttagaggagtatctaagattggttatattctgggcactaaatgaa
ggtgtttcccggcaatttgattcattcagagatggattcgagtcagtcttcccactcagt
catcttcagtacttctacccagaagaactggatcagctgctgtgtggcagtaaagctgac
acgtgggatgccaagacactgatggaatgctgccggcctgatcacggttacactcatgac
agtcgggctgtgaagttcttgtttgagattctcagtagttttgataacgagcagcagagg
ttatttctccagtttgtgacaggtagcccaagattgcctgttggaggcttccggagtttg
aacccacctttgacaatagtccggaagacattcgaatccacagaaaacccagatgacttc
ctgccctctgtaatgacttgtgtgaactatcttaagttgccggactattcgagcattgag
atcatgcgtgagaagctgttgatagccgcgcgggaagggcagcagtcgttccacctttcc
tga
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