Sorex araneus (European shrew): 101552806
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Entry
101552806 CDS
T07854
Symbol
PCDH7
Name
(RefSeq) protocadherin-7
KO
K16498
protocadherin delta 1
Organism
sara
Sorex araneus (European shrew)
Pathway
sara03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
sara00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
101552806 (PCDH7)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sara01009
]
101552806 (PCDH7)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sara04515
]
101552806 (PCDH7)
Protein phosphatases and associated proteins [BR:
sara01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
101552806 (PCDH7)
Cell adhesion molecules [BR:
sara04515
]
Cadherins
Protocadherins
101552806 (PCDH7)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_2
Cadherin_CELSR2_9th
Mid2
TMEM154
Cadherin_pro
KIAA1549
LYRIC
MLANA
DNER_C
Adeno_E3_CR2
EphA2_TM
Motif
Other DBs
NCBI-GeneID:
101552806
NCBI-ProteinID:
XP_004608131
LinkDB
All DBs
Position
Unknown
AA seq
1191 aa
AA seq
DB search
MLRMRTTGWARGWCLSCCLLLPLSLSLAAAKQLLRYRLAEEGPADVRIGNVASDLGIVTG
SGEVTFSLESGSEYLKIDNLTGELSTSERRIDREKLPQCQMIFDENECFLDFEVSVIGPS
QSWVDLFEGRVIVLDINDNTPTFPSPVLTLTVEENRPVGTLYLLPTATDRDFGRNGIERY
ELLQEPGGGGGGEDTPDGEKQPQLIVKGALDREQRDSYELTLRVRDGGEPPRSSQAILRV
LITDVNDNSPRFEKSVYEADLAENSAPGTPILQLRAADLDVGVNGQIEYVFGAATESVRR
LLRLDETSGWLSVLHRIDREEVNQLRFTVMARDRGQPPKTDKATVVLNIKDENDNVPSIE
IRKIGRIPLKDGVANVAEDVLVDTPIALVQVSDRDQGENGVVTCTVVGDVPFQLKPASDT
EGDQNKKKYFLHTSAPLDYETTREFNVVIVAVDSGSPSLSSNNSLIVKVGDTNDNPPVFG
QSVVEVYFPENNIPGERVATVLATDADSGKNAEIAYSLDSSVLGIFTIDPDSGDILVNTV
LDREQTDRYEFKVNAKDKGVPVLQGSTRVIVQVADKNDNDPKFMQDVFTFYVKENLQPNS
PVGMVTVMDADKGRNAEMSLYIEENSNIFSIENDTGTIYSTMSFDREHQTTYTFRVKAVD
GGDPPRSATATVSLFVMDENDNAPTVTLPRNISYILLPPSSNIRTVVATVLATDSDDGIN
ADLNYSIVGGNPFKLFEIDATSGVVSLVGKLTQKHYGLHRLVVQVNDSGQPSQSTTTLVH
VFVNESVSNATVIDSQIARSLHTPLTQDIAGDPSYEMSKQRLSIVIGVVAGIMTVILIIL
IVVMARYCRSKNKNGYEAGKKDHEDFFTPQQHDKSKKPKKDKKNKKSKQPLYSSIVTVEA
SKPNGQRYDSVNEKLSDSPSMGRYRSVNGGPGSPDLARHYKSSSPLPTVQLHPQSPTAGK
KHQAVQDLPPANTFVGAGDNISIGSDHCSEYSCQTNNKYSKQPFRRVTFSVVSQPQDPHQ
GSLQSCYDSGLEESETPSSKSSSGPRLGALPLPEDNYERTTPDGSVDSRPLPDVALTGKC
TRECDEYGHSDSCWMPVRTSPERKKSQPKLSTFMPVDERGSQEKLANGEAAIMGDRNRNL
LNKKLTSSYETFSAASFSKSEEANPEDIPLTKTGEYKPSPVNTLTRREVYL
NT seq
3576 nt
NT seq
+upstream
nt +downstream
nt
atgctgaggatgcggaccaccgggtgggcgcgcggctggtgcctgagctgctgcctcctc
ttgccgctctcgctcagcctggcggccgccaagcaactcctccggtaccggctggccgag
gagggcccggccgacgttcgcatcggcaacgtcgcctcggacctgggcatcgtgaccggc
tccggggaggtgactttcagcctggaatcgggttcggagtacctgaagatcgacaacctc
acgggcgagctgagcacgagcgagcggcgcatcgaccgcgagaagttgccccagtgtcag
atgatcttcgacgagaacgagtgcttcttggacttcgaggtgtcggtgatcgggccgtcg
cagagctgggtggacctgttcgagggtcgggtcatcgtgctggacatcaacgacaacacg
cccaccttcccgtcgccggtgctcacgctcacggtggaggagaaccggccggtgggcacg
ctctacttgctgcccaccgccaccgaccgcgacttcggccgcaacggcatcgagcgctac
gagctgctccaggagcccgggggcggcggcggcggcgaggacaccccggatggcgagaag
cagccgcagctgatcgtgaagggggcgctggaccgcgagcagcgcgactcgtacgagctg
accctgcgggtgcgtgacggcggcgagccgccccgctcctcgcaggccatcctgcgggtg
ctcatcaccgacgtgaacgacaacagcccccgcttcgagaagagcgtgtacgaggccgac
ctggcggagaacagcgccccgggcacccccatcctgcagctgcgggccgccgatctggac
gtgggggtcaacgggcagatcgagtacgtgttcggcgccgccaccgagtcggtgcggcgg
ctgctacgcctcgacgagacctcgggctggctcagcgtcctgcaccgcatcgaccgcgag
gaggtcaaccagctgcgcttcaccgtcatggcccgcgaccgcgggcagccccccaagacg
gacaaggccacggtggtgctcaacatcaaggacgagaacgacaacgtgccgtccatcgag
atccgcaagatcggccgcatccccctcaaggacggggtggccaacgtggccgaggacgtg
ctggtcgacacgcccatcgccctggtgcaggtgtcggaccgagatcaaggcgagaatggg
gtggtcacctgcaccgtggtgggcgacgtgcccttccagctcaagccggccagcgacacc
gagggcgaccagaacaagaagaagtacttcctgcacacctcggccccgctggactatgag
accacccgggagttcaatgtggtcatcgtggcggtggactcgggcagccccagcctctcc
agcaacaattccctgattgtcaaggtgggggacaccaatgacaacccgcccgtcttcggc
cagtcggtggtagaagtgtacttccccgagaacaacatccccggggagagagtggccact
gtgctggccaccgacgcggacagcgggaagaacgcagagatcgcctactcgctggactcc
tccgtgctggggatcttcaccatcgaccctgattccggggacatcctggtcaacaccgtg
ctggaccgcgagcagacagacaggtatgagtttaaagtgaatgccaaagacaaaggcgtg
cctgtgctgcagggcagcaccagggtgatcgtgcaggtggctgacaagaatgacaatgac
cctaagtttatgcaggacgtctttaccttttatgtgaaagaaaacttacagcccaacagc
cccgtgggcatggtcacggtgatggatgctgacaaggggcgcaacgcagagatgagcttg
tatatagaagagaacagtaatatcttttccattgaaaatgacactgggaccatttactcc
accatgtcctttgaccgggaacaccagaccacctacacgttccgagtcaaagctgtggat
gggggagatccccctcgatcggccactgccactgtttctctcttcgtgatggatgagaat
gacaatgcccccacggtcacccttccaagaaatatttcctacattttattgccaccttcg
agtaacatcagaacagtagtagctacagtgctggcaacagacagtgatgatggcatcaat
gcagatcttaactatagcattgtgggagggaatcccttcaagctctttgagattgatgcc
actagtggtgtggtttccttagtgggcaaactcacccagaagcattacggcttacacagg
ttggtggtgcaagtgaatgacagtgggcagccttcccagtccaccacaactctagtgcat
gtgtttgtcaatgagagtgtttccaatgccaccgtgattgactcccagatagccagaagt
ttgcacactccgctcacccaggatatagctggtgaccccagctatgaaatgagcaaacag
agactcagtatcgtcatcggggtggtagctggaattatgacagtgattctcatcatctta
attgtagtgatggcaaggtactgcaggtccaaaaataaaaatggctatgaagcaggcaaa
aaagatcacgaagacttttttacaccccaacagcatgataaatctaaaaagcctaaaaaa
gacaagaaaaacaaaaagtcaaagcagcctctctacagcagcattgtcactgtagaagct
tctaaaccaaatggacagaggtatgacagtgtcaatgagaagctctcagacagccccagc
atggggcggtaccggtcagtgaatggtgggcctggcagtcctgacctggccaggcattac
aaatcgagttccccattgcctactgtccagcttcacccccagtcaccaactgcaggaaaa
aaacaccaggccgtacaagatctaccaccagccaacacatttgtgggagcaggagacaac
atttcgattggatcagatcactgctccgaatacagctgtcaaaccaataacaagtacagc
aaacagccatttcgtagagtgacgttttctgttgtgagtcagccccaggaccctcaccag
gggtccctgcagagttgctatgacagcgggctggaggagtcagaaacaccaagcagtaag
agttcatcagggccaagactgggtgcccttccactcccagaagacaactatgaaaggacc
acgccggatggcagtgttgattcaagacctcttcctgatgttgccctgaccgggaagtgc
acacgggaatgtgatgagtatggccactcagactcctgctggatgccagtccgcacctcc
ccggagcggaagaagagccagcccaaactctccaccttcatgcctgttgatgagcgagga
agccaggagaagctggccaatggcgaggctgccatcatgggtgaccgtaacagaaacctc
ctgaacaaaaagttgacctcctcctacgagaccttcagcgcagctagtttcagcaaaagt
gaggaagccaaccctgaggatattcccctgacaaaaacaggggaatacaagccatctcct
gtcaatactctcactagaagagaagtgtacctgtag
DBGET
integrated database retrieval system
