Sorex araneus (European shrew): 101552879 Help Entry 101552879         CDS       T07854                                  Symbol PALB2 Name (RefSeq) partner and localizer of BRCA2   KO K10897   partner and localizer of BRCA2 Organism sara  Sorex araneus (European shrew) Pathway sara03440   Homologous recombination sara03460   Fanconi anemia pathway Brite KEGG Orthology (KO) [BR:sara00001]  09120 Genetic Information Processing   09124 Replication and repair    03440 Homologous recombination     101552879 (PALB2)    03460 Fanconi anemia pathway     101552879 (PALB2)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:sara03400]     101552879 (PALB2) DNA repair and recombination proteins [BR:sara03400]  Eukaryotic type   DSBR (double strand breaks repair)    HR (homologous recombination)     BRCA complex      101552879 (PALB2)    FA (Fanconi anemia) pathway     Downstream FA components      101552879 (PALB2) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  PALB2_WD40 Beta-prop_WDR5 Beta-prop_WDR19_1st Motif Other DBs NCBI-GeneID:  101552879 NCBI-ProteinID:  XP_012787190 LinkDB All DBs Position Unknown AA seq 1122 aa AA seqDB search MEELSGKPLSCAEKEKLKEKLAFLKREYSKTLARLQRAQRAERLRNSGKKTVGEHDCSFQ QEISSQLNHSASKIKVSPCDPLQISTLLDEETGEKTPITLDIEPVSFSPDNDPLEEFYLE RTVVSQEHFPHRDNVPDGEKQQGKLPGRRKQQKRPLTSQEVNSLFDAESFVLSGRRLKEE VTDGENPRTPITEIRTYLSTKSDIPDSPAAPTEANGEKVLISSIAKPQRDVLLRGNPSPR VTALPLCTLLEGSSGHKRLVHKPPKGSSEPTAQSVKSICPVNSEAQDKNLTVFKDISEEN KSGNSPENFRKGGNESLQGQVVGSQPKSVSPEGTAPVSPENQTHSCTVIEGLPFPAEYYV RTTRHMSDSQRKVALEAVIQNHLGIRKKILRNKKETTKIVSHSNEETGQSETRTPNLGTG QTSSRGPQKHSWTEVRSPPESAKDDFLRKLVSQPFGGRHSVKRKSSISSVLGLHDLLLPT SGTSAAARSEGQVVVHKEKTQNTIVHGKESKEVCGQKEDSFSFSNAYLPLDNDAVSAPFL KDEKLILKHLSSFLNVTDFQLPDEDFGLLKLEKLKSYPEKPVEPFESKYQEEQLELKEEN WMVLEEQTPKEVDTEMEDLDEELSPPKNAHLKTSSLRKQPQKDLSSSILLFTPVNTVAPD DDRTTSLCSPAFPILGTTPAEHSQPHCEKMSTEAVPQMSCTPCLSHTKATSSPCDGGKHS RLTSSPKLDGILGGSGREGQPACGPEPQATTLPTMLATCEENPLRDLCLEHSTEQTDPAD LPPCDNLNPGSLQLVSQLKNPSGSCSVDVSALWWEIAGLKEPCIITACEYVVSLWRPLDT MQWEKVYSWHFTEVPVLQIVPVPGVCSLVCVALGNLEIREIRALLYSSDGHSERQALLSS GNIKAVLGLTKRRLVSSHGTHCDQQVEILTFSEDGGSKEKQFLMPPEETIVTFAEVKGMQ EALLGSTIMNNIVIWNLKTGQLLKKMNIGDSYQASVCHRAYSEMGLLFIVLSHPCAKESE PMGSPVFQLIVINPKTTLSMGVMLYCLPQGQAGRFLEGDVKDSLAAAVLTSGRIAVWDLL LGHCTALLPPISDQNWSFVKWSGTDSHLLAGQKDGNIFVYRY NT seq 3369 nt NT seq  +upstreamnt  +downstreamnt atggaagagctctctgggaagcccctcagctgtgcggagaaggaaaagttgaaggaaaag ttagcattcttgaagagagaatacagcaagacattggcccgcttgcagcgtgcccaaaga gctgagagacttaggaattctggtaagaagacagtaggagaacatgattgctcatttcag caggaaatttcttcacagttaaaccactcagcatctaaaattaaagtatctccttgtgat ccattacaaatcagtacccttctcgatgaagaaaccggagaaaagacacctatcactctt gacattgagcctgtgtcctttagtcctgacaatgaccctttggaagaattttatctagaa agaacagttgtgagccaagaacattttccccacagggacaatgtccctgatggtgagaaa cagcagggtaagctgccagggagaagaaagcagcagaagagaccattgacttcacaggag gtaaactctctctttgatgctgagtcctttgttctctctggaagaagactaaaggaagaa gtaactgatggagaaaatcctaggacccccataactgaaataagaacgtacctttcaact aagtctgacattccagattctccagcagcacccacagaagccaatggagagaaagtatta atttcatcaattgccaaaccacaaagagatgtgcttttaagaggaaatccttcccccagg gtgactgcgcttcctttgtgtactctgttagaaggtagtagtggtcacaagcgccttgta cataagccaccaaaaggcagctctgaacccacggctcaaagtgtaaaaagcatttgccct gtaaactcagaggcacaagacaaaaacctaactgtcttcaaagatatttcagaggaaaat aaaagtggaaactctcccgaaaactttagaaagggtggaaatgagagtcttcagggacag gtggttggaagtcagcctaagagtgtcagccctgaaggaactgctcctgtttctccagaa aaccaaacacattcttgcacagtgatcgaaggacttccatttcctgctgaatattacgtt agaacaacacggcacatgtcagattcccaaaggaaagtagctctcgaggctgttattcaa aatcatttgggtatcaggaagaaaattttgagaaataaaaaagagacaactaaaattgta agtcattctaacgaagaaactggccaaagtgaaactaggacacctaacctaggcacggga caaacaagttcaagaggacctcagaaacactcatggactgaagtcaggtctcccccggag agcgctaaagatgactttttaaggaagctggtttcccagccgtttggtggaagacatagt gtaaaaagaaagtccagcatctcctccgttttaggtcttcatgacctgcttttgccaact tctggcacatcagctgctgctaggtccgagggacaagttgtcgtgcacaaagaaaagact caaaacacaattgttcatggtaaggagagcaaagaagtttgtggtcaaaaggaagattct ttttcatttagtaatgcatacttacctctggataatgatgctgtcagtgctccatttctt aaggacgaaaagctaattttaaagcatctgtcatctttcctcaatgtcacagactttcag ttacccgatgaagattttgggcttcttaaacttgaaaaattgaaatcttacccagaaaag ccagttgaaccttttgaatcaaagtatcaagaagagcagcttgagcttaaggaggaaaat tggatggttttggaggaacagactcctaaagaggtagatacagaaatggaggacttggac gaggaacttagtccaccaaaaaatgcgcatcttaaaacatcatctctgagaaaacagcct cagaaggacctctcctcatcaattttacttttcacgcctgtcaataccgttgcaccagat gatgacagaacaacaagcctgtgttcgcccgctttccccatcttaggcacaaccccagct gagcactcccaaccacactgtgagaaaatgtctacagaggctgttccacagatgagctgt acaccttgtctctctcacacgaaagccacaagcagcccttgtgatggtggtaaacacagc aggctgaccagctcaccaaaattagatggcatcctgggtgggtcaggtagggaaggacag cctgcctgtggtccagagcctcaagccacaactctgcctaccatgttagccacttgcgaa gaaaatccattaagagatctgtgcctggaacattccactgaacagactgacccagcagac cttcctccttgtgataacttaaacccaggcagcctacagttggtttcacagttaaagaat ccttcaggttcctgttctgtggatgtgagtgccttgtggtgggaaatagctggtctcaaa gagccgtgtataataactgcttgtgaatatgtagtttctctgtggaggcctctggataca atgcagtgggaaaaagtttattcctggcactttacggaggttccagtattacaaatagtt ccagtgcctggtgtttgtagtcttgtgtgtgtggctttgggaaatttggaaatcagagaa atcagggcattactttattcctcagatggtcacagtgaaaggcaagcactgctgagttct ggaaatatcaaagctgtgcttggcttgacaaagagaaggctcgtcagtagccatgggacc cattgtgaccaacaagtggagatcctgacattttcagaagatggaggaagcaaggaaaaa caatttttgatgccccctgaagagaccatagtaacttttgctgaggtcaaagggatgcaa gaagctctgcttggttccactataatgaacaacattgtgatttggaatttaaaaactggc cagcttctgaagaagatgaacattggtgattcctaccaagcgtcagtctgtcacagagcc tattctgagatggggcttctgtttattgttctgagtcatccgtgtgccaaggagagtgag cccatgggaagccccgtgttccagctgattgtgattaaccctaagacgaccctgagtatg ggggtgatgctctactgtcttcctcaagggcaggcgggaaggttcctggaaggggacgtg aaggacagtctcgcagcagccgtattgacttctggaagaattgccgtttgggacttgctc ctagggcattgcaccgctctccttccacctatttctgaccaaaattggtcctttgttaaa tggtcaggcacagattctcatttgttggctggacaaaaagatggaaatatatttgtatac cgctactaa

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