Sorex araneus (European shrew): 101553287
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Entry
101553287 CDS
T07854
Symbol
EFTUD1
Name
(RefSeq) elongation factor Tu GTP-binding domain-containing protein 1
KO
K14536
ribosome assembly protein 1 [EC:3.6.5.-]
Organism
sara
Sorex araneus (European shrew)
Pathway
sara03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
sara00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
101553287 (EFTUD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sara03009
]
101553287 (EFTUD1)
Ribosome biogenesis [BR:
sara03009
]
Eukaryotic type
Pre-60S particles
GTPases
101553287 (EFTUD1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFL1
EFG_C
EFG_III
EF-G_D2
GTP_EFTU_D2
MMR_HSR1
EFG_IV
Phlebo_G2_C
Motif
Other DBs
NCBI-GeneID:
101553287
NCBI-ProteinID:
XP_004617597
LinkDB
All DBs
Position
Unknown
AA seq
1105 aa
AA seq
DB search
MALGSVDRVIRLQRDPARIRNICVLAHVDHGKTTLADCLISSNGIISSRLAGKLRYMDSR
EDEQIRGITMKASAISLHYAAGSEEYLINLIDSPGHVDFSSEVSTAVRICDGCIIVVDAV
EGVCPQTQAVLRQAWLENIRPVLVINKIDRLIVELKFTPQEAYSHLKNILGQINALTGTL
FTSKVLEERAERETESQVNAHSEQGEQVYDWSSGLEDTDDSHLYFSPDQGNVVFASAIDG
WGFGIEHFAEIYSKKIGIKKEVLLKTLWGDYYINMKAKKIMKADQAKGKKPLFVQLILEN
IWSLYEAVLKKDKEKIDKIVTSLGLKMGAREARHSDPRVQINAICSQWLPVSQAVLAMVC
QKLPSPLEITAERVEKLMCTGSQTFDSLPPETQALRAAFLKCGSEDTDPVIIFVSKMFAV
DAKALPQNKPRPLTQEEMAERRERARRRHAEKLAAAQGKATSEVTQDGNSPEDGPRGAEP
EGNEPQVESLPLKAVVQEGDSPEFFIAFARVFSGVARKGKKIFVLGPKYSPVEFLRRAPL
GFSTSPEDLPAVPHMACCSLENLYLLMGRELEDLEEVPPGNVLGIGGLQDFVLKSATLCS
SPCCPPFIPLSFEATPIVRVAVEPKHPSDMPQLVKGMKLLNQADPCVQILIQETGEHVLV
TAGEVHLQRCLDDLKERFAKIEISVSEPIIPFRETVTKPPKVDMVNEEIGRQQKIAVIHQ
AKEDQSKVPDGVHVDADGLITITTPNKLAELSVRAMPLPEEVTQLLEENSDLIRSMEQWT
SSLNEGKNSQQIDQKTQEKIQEFKGKLEQHLTGRKWRNTVDQIWSFGPRKCGPNMLVNRS
EDFEGSVWAGLAGACPREARQYRDLGNSIVSGFQLATLAGPMCEEPLMGVCFVLEKWDLS
QFKEQAAREAQNPEDHPGGEGPRERRPAPRGDPPLPDCYGPFSGQLIATMKEACRHALQA
KPQRLMAAMYTCDIMATGDVLGRVYAVLSKREGRVLQEEMKEGTDMFIIKAVLPVAESFG
FADEIRKRTSGLASPQLVFSHWEIIPSDPFWVPTTEEEYLHFGEKADSENQARKYMNAVR
KRKGLYVEEKIVEHAEKQRTLSKNK
NT seq
3318 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgggcagtgtggaccgggtgatccggctgcagcgggacccggcgcggatccgc
aacatctgcgtgctggcgcacgtggaccacggaaaaactactctggctgactgtcttata
tctagcaatggaatcatttccagccgcttggcaggcaagttgcggtacatggacagcaga
gaggatgagcagatccgaggcatcactatgaaagccagcgccatctccctgcattatgca
gcaggcagtgaggaatacctaattaacctgatagactccccaggacatgtggatttctcc
tcagaagtatccactgccgtgcgaatttgcgatggatgcatcatcgtggtagatgctgtg
gaaggagtctgtccacagacacaggcagttctgcgacaagcctggcttgaaaacatccgt
ccggtcttagtgattaataagatagatcgcttgatagtagaactgaagttcaccccacag
gaggcctattctcacctcaagaatattttaggacagataaatgcactcacaggaactctt
tttacttctaaagtcctagaagaaagagcagagagagagactgagtcccaggtgaatgca
cactcggagcaaggagagcaggtgtacgactggagcagcggcttggaggacacggatgac
tcacacctctacttttctcccgatcagggcaatgtggtatttgccagcgccatagatgga
tggggctttggaatcgagcattttgcagaaatctacagtaaaaaaattggcatcaaaaag
gaagttctcttgaaaaccttgtggggagattattatataaatatgaaggccaagaagatc
atgaaggcggatcaggcaaaaggaaagaaacctttgtttgtgcagttgatcctggaaaat
atatggagtttgtatgaggctgtcttaaaaaaagacaaagagaagatagataaaatcgta
acttccttaggattgaaaatgggcgctcgggaggcacgccattcagaccctcgagtacag
atcaatgccatttgcagccagtggctccctgtctcccaggctgtgctggcgatggtgtgc
cagaagctccccagtccccttgagatcacagccgagcgagtggagaaactgatgtgcaca
ggctcccaaaccttcgactcgctgcccccggaaacccaggcgctgagagcagcttttctg
aaatgtggaagtgaagatactgatccagttattatctttgtgtccaaaatgtttgcagtc
gatgctaaagcgctgcctcagaataagcccaggcccctcactcaagaagaaatggcagag
cggcgagaacgtgccaggaggcggcacgcagaaaagctagcagctgcacaggggaaggcc
acctcggaggtcactcaggatgggaacagccctgaagatggtccccggggagcagagcca
gaaggtaatgagccgcaggtggagagtcttcccctcaaagctgtggtccaagaaggagac
agcccagagtttttcattgcctttgctcgagtcttcagtggtgtggctcgaaaagggaag
aaaatttttgtcttgggacctaagtacagtcctgttgagtttttgcggagggcgccatta
ggcttctccacgtcccctgaggacctgcctgctgtcccccacatggcctgctgctctctg
gagaacctgtatcttctgatggggcgtgagctggaggacctggaagaggtgcctccagga
aacgtgctcgggataggaggccttcaggacttcgtgctgaaatcagcgaccctctgtagt
tcaccctgctgccctccattcatcccactcagctttgaggccacccccatcgtcagggtc
gccgtcgagcccaagcacccaagtgacatgcctcagcttgtcaaaggaatgaagttgctg
aaccaagctgacccctgcgtccagattctcattcaggagacgggtgagcacgtcctggtc
acagccggggaggtgcacctccagcgatgcctggatgacttgaaagaacggtttgcaaag
attgaaatcagtgtatctgaacccattattccattcagagaaacagtcacaaaacctcct
aaagtcgacatggtcaatgaagaaataggcagacagcagaagatcgccgtcattcaccaa
gcgaaagaagaccagagcaaagtccccgacggggtccacgttgatgccgatggactcatc
accatcacgacccccaacaagcttgctgagctcagtgttcgagccatgccccttccagaa
gaagtcacccagcttcttgaagaaaatagtgacttgattcgttctatggagcagtggaca
tcctctttgaatgagggcaaaaactcccagcagattgaccagaagacccaggagaaaatt
caggaattcaaaggaaaactagagcagcatctcacggggagaaagtggaggaacactgtt
gaccaaatctggtcgtttggcccaagaaaatgtggacccaacatgctggtgaacaggagc
gaggacttcgagggctcggtgtgggccggcctggcgggcgcctgtccccgagaagcccgg
cagtaccgagacctgggcaacagcatcgtgagcggcttccagctggccacccttgccggc
cccatgtgcgaggagccgctcatgggggtctgctttgttctggaaaagtgggatctcagc
cagttcaaggaacaagcagccagggaggcgcagaacccagaagaccatcctgggggagag
ggacccagagagaggaggccggccccaagaggagaccccccgctcccagactgctacggg
cccttctcggggcagctcatcgccaccatgaaggaggcctgtcgccatgccctgcaggcc
aagccgcagcggctgatggcagccatgtacacttgtgacatcatggccacaggcgacgtg
ctgggccgggtctatgctgtcctgtccaagagagaggggcgcgtgctgcaggaggagatg
aaggagggcacagacatgttcatcatcaaggccgtgctgcccgtcgctgagagctttggc
ttcgcagacgagatccgcaagaggaccagcgggctggcgagcccacagctggtgttcagc
cattgggagatcatccccagtgaccccttctgggtgccgaccaccgaggaggagtatttg
cactttggggagaaggcggactctgagaaccaggcccggaagtacatgaatgctgtgcgg
aagcggaaggggctgtacgtggaggagaagattgtggagcacgcggagaagcagaggacc
ctcagcaagaacaagtag
DBGET
integrated database retrieval system
