Sorex araneus (European shrew): 101553550
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Entry
101553550 CDS
T07854
Symbol
TRPM1
Name
(RefSeq) transient receptor potential cation channel subfamily M member 1
KO
K04976
transient receptor potential cation channel subfamily M member 1
Organism
sara
Sorex araneus (European shrew)
Brite
KEGG Orthology (KO) [BR:
sara00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sara04040
]
101553550 (TRPM1)
Ion channels [BR:
sara04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
101553550 (TRPM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSDAT_euk
TRPM_tetra
Ion_trans
LSDAT_prok
Motif
Other DBs
NCBI-GeneID:
101553550
NCBI-ProteinID:
XP_004617840
LinkDB
All DBs
Position
Unknown
AA seq
1595 aa
AA seq
DB search
MSSSFKRGSLRSVASSGSQKSQKAWLEKTFCKRECVFVIPSTKDPNRCCCGQLTHQHIPP
LPSVTASRDDEGAQAEAQPEKWTVGKHTQRVPTDSYGLLEFQGGGSCNKALYIRVSCDTK
PDSLLHLMVKEWHLDLPKLLISVHGGLQNFEMQPKLKQVFGKGLIKAAMTTSAWIFTGGV
STGVIRHVGDALKDHSSKSRGRVCAVGIAPWGMVENKEDLIGKGVARVYQTMSNPLSKLA
LLNNFHTHFILADNGTLGKYGAETKLRRQLEKHISLQKINTRLGQGVPVVGLVMEGGPNV
VSIVLEYLREDPPVPVVVCDGSGRASDILSFAHKYCEEGGVINESLKDQLLVTIQKTFNY
TKTQSHQLFTIVLECMKKKELITVFRMGSEGQADMEMAILTALLKGTNASAPDQLGLALA
WNRVDIARNQIFVFGPHWPPLGSLAPPAESKTPEEKKLPAAAKAGRAKGKGKKKGKGKEE
AEEETDPRKIELLNWVNALEQAMLDALVLDRVDFVKLLIENGVNMHHFLTIPRLEELYNT
RLGPPNTLHLLVRDVKKGNLPPDYHISLIDIGLVLEYLMGGAYRCRYTRKSFRTLYNNLF
GPKRPKALKLLGMEDDEPPAKGKKKKKKKKEEEVDIDVDDPAVSRFQFPFHELMVWAVLM
KRQRMAVFLWQRGEESLAKALVACKLYKAMAHESSESELVDDISQDLDNNSKDFGQLAVE
LLDQSYKHDEQIAMKLLTYELKNWSNSTCLKLAVAAKHRDFIAHTCSQMLLTDMWMGRLR
MRKNPGLKVILGILLPPTILFLEFRTSDDFSYQTAKENEDGKDKEENVDTNADAGSRKGD
EENEHKKRKSIPIGTKICEFYNAPIVKFWFYTISYLAYLLLFNYVILVRMDRWPCLQEWI
VIAYILSLALEKVREVLMSEPGKLSQKIKVWLQEYWNITDLVAISTFLVGVVLRLQQQPY
MGYGRVIYCVDIIFWYIRVLDIFGVNKYLGPYVMMIGKMMIDMLYFVVIMLVVLMSFGVA
RQAILHPDEEPSWKLARNIFYMPYWMIYGEVFADQLDLYAMEINPPCGDNLFDEEGKRLP
PCIPGAWLTPAIMACYLLVANILLVNLLIAVFNNTFFEVKSISNQVWKFQRYQLIMTFHD
RPVLPPPMIILSHLYMIIMRLSGRCRKKREGERDEQDRGLKLFLSDEELKRLQEFEAQCV
QEHFQEKEDEQQASSDERIRVTCERVENMSVRLDEIHERGNFMKMALQSVDLRLCQLEEL
ANRTVDTLGSLAGVDRADLLPTRSRAASEWDVTFLQRQSSLGSADGFSLSQYHLSGEEAI
EENPRSMPPGTGSHVKEDKDLKMQLDPKGPSSPLASASTPAPDHSPLDLDPGKEALELNA
GSNTGSTAKDVERQAGNPEREITLPPSFHPTQATCGQNKFDFSNPQFAVGSDGMEGTLVH
PPGETKLPHFHPEEAPRARRTIKSRSFAYSRGRKLAGGVKTRPTAAWKCPVQKVTRSRST
ESFVSEAETLTPNISRLCAADAHPLGKENSLSVKSGPALGFFTSRSKSLHGHLRKGQAFQ
GAGGRSRHTGSASNLVVVSGIAPEEQKFPQEKTSE
NT seq
4785 nt
NT seq
+upstream
nt +downstream
nt
atgagcagctccttcaaacgtggctcgctccggagcgtggcctcttcgggctctcagaag
agtcagaaagcttggctagaaaaaaccttttgcaaacgagaatgtgtctttgtaattccc
agcactaaggatcccaacaggtgctgctgcggccagctcactcaccagcatatcccgcct
ctgccgagtgtcaccgccagcagggatgatgagggcgcgcaggccgaggcccagccggag
aagtggactgtgggcaagcacacgcagagggtcccgaccgactcatacggcctgctcgag
ttccaggggggcggctcttgcaacaaggccctgtacatccgcgtgtcctgcgacaccaag
ccagattcgctgcttcatctcatggtgaaagaatggcacctggacctccccaaactcttg
atctcggtgcacggcggcctccagaacttcgagatgcagcccaagctgaagcaggtgttc
gggaaaggcttgatcaaggctgccatgacgacaagcgcctggatcttcacgggaggtgtc
agcacaggtgtcatccggcacgtgggcgacgccctgaaggaccattcctccaagtctcga
ggccgcgtgtgtgctgttgggatcgccccgtggggcatggtggagaacaaggaagatctg
atagggaagggggtggccagagtgtaccagaccatgtccaatcccctcagcaagctcgcg
ttactcaacaacttccacacgcacttcatcctggccgacaacggcacactgggcaaatac
ggggctgagacaaagctgcggaggcagctggagaagcacatttccctgcagaagatcaac
acgagactgggacagggtgtccctgtggtgggccttgtgatggaagggggtcccaatgta
gtctccatcgtgttggaatatctccgagaagaccctccagtccctgtggtggtttgcgat
ggcagtggacgcgcctcggacatcctgtcttttgcacacaagtactgtgaggaaggcgga
gtcatcaatgaatccctcaaagatcagctcctagttaccatccagaaaacatttaattac
accaagacacaatcgcaccagctgttcaccattgtactggagtgcatgaaaaagaaagag
ctgatcacagtgttcaggatgggctccgaggggcaggcagacatggagatggccattctc
actgccctgctcaaaggaacaaacgcatctgctccggaccagctgggcctggcactggct
tggaaccgtgtggacatagcacggaatcagatcttcgtcttcgggccgcactggccgccc
ctgggcagcctggccccgcctgcagagagcaagacccccgaggagaagaagcttcctgcc
gcagccaaggcgggcagagccaaagggaagggcaaaaagaaagggaaaggcaaggaagaa
gctgaggaggagacggacccccgcaagatcgagctgctgaattgggtgaacgctctggaa
caagccatgctggacgcattagtcttggatcgggtggactttgtgaagctcttgattgag
aacggggtgaacatgcaccatttcctcaccattccgcggctggaagagctttacaacacg
agactgggaccgccaaacactctccatttgctggtgagggatgtgaaaaagggcaacctg
ccccctgattaccacatcagcctcatcgacatcgggctggtcctggagtacctcatgggc
ggggcttaccgctgccgatacacacgcaagagcttccggaccctctacaacaacctgttt
ggccccaagaggccaaaggctctcaaacttctgggaatggaagatgatgaacctcctgcc
aaagggaagaagaagaaaaagaagaagaaggaggaggaggtggacatcgacgtggatgac
cctgcagtgagccgcttccagttccccttccacgagctgatggtgtgggctgtgctgatg
aagcgccagcgcatggctgtcttcctgtggcagcgtggtgaggagagcctggccaaggcc
ctggtggcctgcaagctgtacaaggccatggcccatgagtcctcggagagcgagctggtg
gatgacatctcccaggacctggacaacaactccaaggacttcgggcagctggccgtggaa
ctgttggaccagtcctataagcatgatgagcagatcgccatgaagctattaacctacgaa
ctgaaaaattggagcaactccacctgcctcaagctggctgtggctgccaagcaccgggac
ttcatcgcacacacgtgcagccagatgctgctcacggacatgtggatggggaggctgcga
atgcggaagaacccgggcttgaaggtgatcctggggatacttcttccccccaccatcttg
tttttggaattccgcacctctgatgacttctcataccaaacagccaaggaaaacgaagat
ggcaaagacaaagaagagaatgtggacacaaatgcagacgctggctccagaaagggggat
gaagagaatgagcacaagaagcggaaaagcattcccatcgggacgaagatctgtgaattc
tacaacgcgcccattgtcaagttctggttctacactatctcctacctggcctacctgctg
ctcttcaactacgtcattctggtgcggatggaccgctggccctgtctgcaggagtggatc
gtcattgcctacatcctgagcctggccttagagaaagttcgagaggtcctcatgtcagaa
ccaggcaaactcagccagaaaatcaaagtctggctgcaggaatactggaacatcacagat
cttgtggccatctctacattcctggtcggcgtggtccttcgcctgcagcagcagccgtac
atgggatatggccgggtgatctactgtgtggacatcatcttctggtacatccgggtcctg
gacatctttggggtcaataagtacctagggccctacgtcatgatgatcggaaagatgatg
atcgacatgctgtactttgtggtcatcatgctggtggtgctgatgagttttggggtggcc
cggcaggccatcctgcaccccgacgaggagccctcgtggaagctggctcggaacatcttc
tacatgccatactggatgatctatggggaggtgtttgccgatcagctagacctctacgcc
atggaaattaatcctccttgtggtgataacctgtttgatgaagaaggcaaaaggctgccg
ccctgtatcccgggtgcctggctcactcctgccatcatggcctgctacctcctggtcgcc
aacatcctgctggtcaacctgctcatcgctgtcttcaacaataccttcttcgaagtcaag
tcaatatccaaccaggtgtggaaattccagcgctaccagctgatcatgaccttccatgac
cggccagtactgcccccgcccatgatcattctcagccacctctacatgatcattatgcgc
ctcagtgggcgctgcaggaagaagagagaaggcgagcgggatgagcaggatcgtgggctg
aagctcttcctcagcgacgaggagctgaagcggctgcaggagttcgaggcgcagtgcgtg
caggagcacttccaggagaaggaggacgagcagcaggcctccagcgatgagcgcatccga
gtcacctgcgagagagttgaaaatatgtcagtgaggttggatgagatccatgaaagggga
aatttcatgaaaatggccctacagagtgtcgatctgcgactctgtcagctggaagagtta
gcgaaccgcacagtggacacgctgggaagcctggcaggggttgaccgggctgacctgctg
cccacgcggtcccgagccgcctctgagtgggacgtgactttccttcaacggcagagcagc
ctgggcagtgccgatggcttcagcctgtcccagtaccatttaagtggagaggaggcgatt
gaggagaaccctcgctccatgcctccagggacaggctcccacgtcaaggaagacaaggac
ctgaaaatgcagctggaccccaagggaccttctagccccctggccagtgccagcactcca
gccccagaccacagtccacttgacttggaccctggcaaggaggctttggagctcaatgcc
ggttccaatacggggagcactgctaaagacgtggaaaggcaagctgggaaccccgaaaga
gaaataactcttcccccaagtttccatccaacccaggcaacatgtggacagaacaaattt
gacttctcaaaccctcagtttgcggtgggaagcgatgggatggaaggcacactggtccac
cccccgggagagacaaagctgcctcattttcacccggaggaagcaccgagggctcgcaga
accatcaagtccagaagctttgcgtattcccggggaagaaagctggcgggtggggtgaag
acacgccccacagcagcgtggaagtgtccagtgcagaaggtcacccgctcacgtagcacc
gagagctttgtgtctgaagctgagactctcaccccgaacatttcccgtctgtgcgcagct
gatgcacacccgcttgggaaggaaaactcactgtctgtgaaatccggcccagctctgggc
ttcttcacttccaggtccaagagcttacatggacatttgaggaaggggcaagcttttcag
ggtgcaggaggcagatccaggcacacaggcagtgcaagtaatttagtggtggtgtctgga
attgccccagaagaacagaagtttccacaagagaaaacttcggaa
DBGET
integrated database retrieval system
