Sorex araneus (European shrew): 101553668
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Entry
101553668 CDS
T07854
Symbol
TNRC6A
Name
(RefSeq) trinucleotide repeat-containing gene 6A protein
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
sara
Sorex araneus (European shrew)
Brite
KEGG Orthology (KO) [BR:
sara00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sara03019
]
101553668 (TNRC6A)
03036 Chromosome and associated proteins [BR:
sara03036
]
101553668 (TNRC6A)
Messenger RNA biogenesis [BR:
sara03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
101553668 (TNRC6A)
Chromosome and associated proteins [BR:
sara03036
]
Eukaryotic type
Gene silencing
piRNA pathway
101553668 (TNRC6A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TNRC6-PABC_bdg
Ago_hook
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
101553668
NCBI-ProteinID:
XP_012787192
LinkDB
All DBs
Position
Unknown
AA seq
1895 aa
AA seq
DB search
MRQHFRVPEQIKPSVSQPQPANSPDGTSAATSTNNNAKRATGSSPQQPQQPLPQPQPQPP
AQAVPRYPREVPPRFRHQEHKQLLKRGQHFPVIAANLGSAVKALGSQPESSALPAPRPQD
HGEAPGGRTPSDVNHNPSGPQYEHSPRGPVSSPGDACTDCQDAAVSDAPEREAWPSVPGS
DPESASECADADSASSSGSERTITTMASGGAGGDKDGLRGSAGLGSQNKFVAGSGGGSGP
GGCPGPWGFPHGAMLSTCQVPAEAPDGTPESSGGRVSAWGTASSSSNGGLNPSTLNPASN
HGAWPVLESSGLALKGPAGSGGAGVSVQGGALGQMPNNQSINSKAGGPSALGTWGSLQET
CDSDLSGTQKVPFSGQPQNITAETAGPNNTTNFMTSSLPNSGSVQNSELPGNSGAWRVST
VHHPQIQAPSVMNGTSLPHLSNGESKSGGAYGTTWGAYGSAYAADKCSSPNGQAHGDTVN
ATLMQPGANAPGGTPFHASTSKGGGVWEAGAAGAQGAPWASGNGANSGGSRRGWGTPAQN
TGTNLPSVEWGKLPGNQHSSDSANGNGKKFTNGWKSTEEEEPGSAASQASEQSSVWAKTG
GPGEGDGSTESPARLDEKAPGESQSRDRRKVDQHTLLQSIVNRTDLDPRVLSNSGWGQTP
IKQYTAWDTDASPRGERKADNGTEAWGSSATQTFNSGVCGEKTSPTSNDTSSVAGWGDPK
PTVRWGDSKGSNCQGGWEDDSAATGIVKSNQWGTCKEEKSAWNDSQKSKQGWGDGQKANP
GWSVSAGDSWGESSRSNHWGEANKKSSSGGSDSDRSVSGWNELGKPSSFTWGNNINPNNS
SGWDESSKPSPSQGWGEGPKSNQSLGWGDSSKPVGSPDWNKQQDIVGSWGIPPAAAGKPP
GTGWLGGPIPAPAKEEEPTGWEEPSPESIRRKMEIDDGTSAWGDPSKYNYKNVNMWNKNV
PNGGGRSEQQAQGPPLLPAGGPGSGKDVSSGSGWGEPWGEPAPATTVDNGTSAWGKPVDS
GPSWGEPIAASSASTWGSGSVGPQALSKSGPKSMQDGWCGDDAPLPGARPTGWEEEEDVE
IGMWNSNASQELNSSLNWPPYTKKMSSKGLSGKKRRRERGMMKGGNKQEEAWINPFVKQF
SNISFSRDSPEENVQSNKMDLSGGMLQDKRMEIDKHSLNIGDYNRTVGKGPGSRPQISKE
SSMERGPYFDKDGLVPDESQNMPFMSSQSMKLPPSNSALPNQALGPIAGLGMQNLNSVRQ
NGNPSMFGVGNTAAQPRGQPQPPAQPLGSSQPNLRAQVPPPLLSPQVPVSLLKYAPNNSG
LNPLFGPQQVAMLNQLSQLNQLSQISQLQRLLAQQQQRAQSQRSVPSGSRQPQDQQGRPL
SVQQQMISQPRQLDPSLLVKQQPPASQPPPLHQPAMKSFLDNVMPHTTAELQKGPSPINA
FSNFPLGLNSNLNVNMDLNSIKEPQSRLRKWTTVDSISVNTSLDQNSSKHGAIPSGFRLE
ESPFAPYDFMSSSPSPASPPGSIGDGWPRAKSPNGSSSVNWPPEFRPGEPWKGYPNIDPE
TDPYVTPGSVINNLSINTVREVDHLRDRNSGSSSSLNTTLPSTSAWSSIRASNYNVPLSS
TAQSTSARNSDSKLTWSPGSVTNTSLAHELWKVPLPPKNITAPSRPPPGLTGQKPPLSTW
DNSPLRVGGGWGNSDARYTPGSSWGESSSGRITNWLVLKNLTPQIDGSTLRTLCMQHGPL
ITFHLNLPHGNALVRYSSKEEVVKAQKSLHMCVLGNTTILAEFASEEEISRFFAQSQSLT
PSPGWQSLGSSQARLGPLDCPHSFSSRTDLNHWNGAGLSGTSCGDLHGTSLWGTPHYSTS
LWGPPSSSDPRGMSSPSPINAFLSVDHLGGGGESM
NT seq
5688 nt
NT seq
+upstream
nt +downstream
nt
atgcgccagcacttccgtgtgccagaacagataaagcccagtgtaagccagcctcagcct
gccaactctcctgacggcacctccgcagcaaccagcactaataataatgccaagcgagcc
accggcagcagcccgcagcagccgcagcagcccctgccccagccccagccacagccgcca
gcacaggccgtgcctcggtatcctcgggaagtcccgccacgatttcgccaccaggaacac
aaacagcttctaaagaggggtcagcatttcccggtcatcgcagcaaacctgggctcggct
gtgaaagcgctgggcagccagccggagagcagcgcgctgcccgcgccgcggccgcaggac
cacggagaggcgccgggcggcaggactccgtcagacgtcaatcacaacccttccggaccc
cagtatgaacattcgccgcggggccctgtgtcttctcccggcgacgcgtgcacagactgt
caggatgctgctgtgagcgacgcgcccgagcgggaagcatggccctcggtccctggcagt
gaccccgagtcggcctcagaatgcgcggacgctgactctgcctcgagttccggatcagag
cgaaccatcacgaccatggcgtcggggggcgcgggcggcgacaaggatggccttcggggt
agcgccggacttggctcccagaacaagtttgtggctggtagtggcggcggctcgggcccc
ggaggctgtcccgggccgtggggcttcccccacggggccatgctaagcacatgccaggtc
cccgcggaggctcccgacggcacgcccgagagcagcggcggtcgcgtgagcgcttgggga
acggcgagttcttcatccaatggagggttaaatccaagcactttgaatcccgcgagcaac
cacggtgcctggccagtgttggagagcagcgggctcgccctgaaagggcctgcggggagc
ggcggcgctggcgtcagcgtgcagggcggcgccctcggccagatgcccaacaatcagagt
attaactctaaagcgggcggtccttctgccctcggcacctggggaagccttcaggagacg
tgtgactccgacctcagtggtacccagaaggttccgttcagtggtcaacctcagaacatc
accgctgaaacggccggaccaaataacactacgaacttcatgacctctagtttaccaaac
tccggttccgtgcagaacagcgaactgcccgggaactcgggagcctggcgcgtgagcaca
gtgcaccaccctcagatccaggccccctcggtgatgaacggcacttccctccctcacctt
agcaacggcgagtccaagagcgggggcgcctacggtactacatggggtgcctacggctct
gcttacgctgccgacaaatgctccagccccaacggccaagctcatggtgacactgtgaat
gcaactctaatgcagcctggcgcaaacgcgcccgggggcactcccttccacgcgagcacg
agcaaaggaggcggcgtgtgggaggcgggggcggcgggtgcccagggcgcgccgtgggcg
agcggaaatggtgcaaattctggcggcagtcggcgaggctggggcacccctgcacaaaac
actggcactaatctccccagcgtggagtggggcaagctgccgggcaaccagcattccagt
gacagtgcaaacggcaacggaaagaagtttacaaacggatggaagtctactgaggaagag
gagccgggctctgcggcatctcaggccagcgagcagagcagcgtgtgggccaaaacgggg
ggtcccggggagggcgacggcagcacggagagccccgcacgcctggatgagaaagccccc
ggggagagtcagagccgcgacagaaggaaagtcgatcagcacacgttactccaaagcatc
gtgaacagaacggacctggacccccgggtcctgtccaactccggctggggacagacgccc
attaagcagtatactgcctgggacacggacgcctcgccccgaggggagcgcaaggcggac
aacgggaccgaggcctggggcagctctgccacccagacttttaactcaggggtgtgtgga
gagaagacgagcccgaccagtaacgatacctcatctgtagcggggtggggagaccccaag
ccgaccgtgaggtggggggactccaaaggctccaactgccagggggggtgggaagacgat
tctgctgctacaggaatagtcaagagcaatcagtgggggacttgcaaagaggagaagtcc
gcctggaacgactcgcaaaagagcaaacaggggtggggggacgggcagaaagcaaacccc
gggtggtccgtgtctgccggagacagctggggcgaaagctccagaagtaaccactggggt
gaggccaacaagaaatccagctcaggaggtagcgatagcgacaggtccgtttcgggttgg
aacgaactcggcaaacctagttccttcacttggggaaataacataaatccaaataattca
tcaggatgggacgaatcttcgaagcccagcccttcccagggatggggagagggtccaaag
tccaatcagtcgctgggctggggagactcgtccaagccagtcggttctccggactggaac
aagcaacaggacattgttgggtcttggggcatcccgccggcggcggccggcaaacctcct
ggcaccggctggctgggggggcccatcccggccccggccaaggaggaggagcccacgggc
tgggaggagccgtccccagaatccatccggcgcaaaatggagattgacgacgggacctcg
gcgtggggagaccccagcaagtacaactacaaaaatgtgaacatgtggaacaagaacgtc
ccgaatggcggcggccgctcggagcagcaggcccagggacccccgctgctgccggccggg
ggccccggctccggcaaggacgtgagcagcggctccggctggggcgagccctggggggag
cctgctccagccaccactgtggacaacggcacttcggcgtggggcaagcccgtggacagc
ggccccagctggggggagcccatcgctgcgtccagcgcgtccacgtggggctccggctct
gtcggtccacaggcgctgagcaagtctgggcccaagtctatgcaggacggctggtgcggg
gacgacgcgcctctgcctggcgcgcgccccaccggctgggaggaggaagaggacgtggag
atcgggatgtggaacagtaatgcgtctcaggagctgaactcctctttaaattggccacca
tacacgaagaagatgtcatcgaagggtctgagtggcaaaaaaaggagaagggaaagggga
atgatgaaaggtggaaacaaacaagaagaagcctggataaatccatttgttaaacagttt
tcaaatatcagtttctcgagagactcacccgaagaaaatgtacagagcaataagatggac
ctttctggaggaatgttacaagacaaacgaatggagatagataaacatagcctaaatatt
ggtgattacaatcgaacggtcgggaaaggtcctggttctcggccgcagatttccaaagag
tcttccatggagcgcggtccttattttgataaggatggccttgtacccgatgaatcccaa
aacatgccgtttatgtccagtcagagcatgaagcttcccccttcaaatagtgcactacct
aaccaggccctgggccccatagcagggctggggatgcaaaacttgaattctgttagacag
aatggcaatcccagtatgttcggtgtcggaaacacagcagcacaaccccggggccagccg
cagcctccagcacagcctcttggttcatctcagcctaatctccgtgctcaagtgcctcct
ccattactctcccctcaggttccagtttcattgctgaagtatgcaccaaacaacagtggc
ctgaatccgctctttggccctcaacaggtagccatgctgaaccagctatcccaactcaac
cagctttctcagatctcccagttacagcgactgctcgcacagcagcaacagagggcgcag
agccagcggagcgtgccgtctgggagccggcagccacaggaccagcagggtcggcctctg
agcgtgcagcagcagatgatctcgcagcctcgccagctggacccgagcctgctggtgaag
cagcagccgccggcctcgcagccgccgccgctccatcagccagccatgaagtccttcctc
gacaacgtcatgccccacaccacagccgagctgcagaaagggccctcaccaataaacgct
ttcagcaacttccctctaggcttgaactcaaacttgaatgtaaatatggatctgaacagt
attaaagagccgcagtcgagactgaggaagtggacgacggtggacagcatttctgtgaac
acatctttggatcaaaactccagcaaacatggtgctattcccagtggtttccggctggaa
gagtctccattcgctccctacgacttcatgagcagcagcccctccccggccagccctcca
ggctccatcggggacggctggccacgtgccaaatcgcctaacggctctagcagtgttaac
tggccgccagaattccgccctggcgagccatggaaaggttatccaaacattgaccctgaa
actgacccttacgtcactcctggcagtgtcataaacaatctctcgatcaatactgtgcgg
gaagtcgaccacctcagggacaggaacagtgggtcctcctcatccttgaacaccacgctg
ccttcaactagtgcctggtcatccattcgtgcctccaactacaacgtccccctcagcagc
acagcacaaagcacttcagccagaaatagtgattccaaattgacatggtctcctggttca
gtcacaaacacgtctctggctcacgagctgtggaaggtccctttgccacctaagaacatc
actgctccgtcccgcccacctccgggactcactggtcagaagccgcccttgtccacgtgg
gataactcgcccctgcgtgtcggtggaggatgggggaattctgacgccaggtacacccca
ggttccagctggggtgagagcagctcagggagaataacaaattggctcgttctaaaaaac
ctcacacctcagatcgatggctcgaccctgcgcaccctgtgcatgcagcacggcccgctg
atcacattccacctgaacctcccacacgggaacgctctggtccgctacagctcgaaggaa
gaggtggtgaaggcccagaagtctctgcacatgtgtgtcctggggaacacgaccatcctc
gccgagtttgccagtgaagaggagatcagtcgtttctttgcacaaagccagtctctgacc
ccttctcccggctggcagtccctcggctccagccaggcccggctgggccccctcgactgc
cctcactccttctccagccggaccgatctcaatcactggaatggtgctgggctgtcggga
actagctgtggggaccttcacggcacttcactctgggggaccccccattattccacaagc
ctctggggcccccccagcagcagcgacccccggggaatgagcagcccctcccccattaac
gctttcctttctgttgaccacctgggtgggggtggcgagtccatgtag
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