Sorex araneus (European shrew): 101553723
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Entry
101553723 CDS
T07854
Symbol
SMARCD2
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2 isoform X1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
sara
Sorex araneus (European shrew)
Pathway
sara03082
ATP-dependent chromatin remodeling
sara04714
Thermogenesis
sara05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
sara00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
101553723 (SMARCD2)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
101553723 (SMARCD2)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
101553723 (SMARCD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sara03021
]
101553723 (SMARCD2)
03036 Chromosome and associated proteins [BR:
sara03036
]
101553723 (SMARCD2)
Transcription machinery [BR:
sara03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
101553723 (SMARCD2)
Chromosome and associated proteins [BR:
sara03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
101553723 (SMARCD2)
PBAF complex
101553723 (SMARCD2)
GBAF(ncBAF) complex
101553723 (SMARCD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
101553723
NCBI-ProteinID:
XP_004618047
LinkDB
All DBs
Position
Unknown
AA seq
484 aa
AA seq
DB search
MEGLGFGPRRALPLTYAPPMPYFPQRPGMSPGSRMPMAGLQVGLPAGAPFGAAAPLRPGM
PPTMMDPFRKRLLVPQAQPPMPAQRRGLKRRKMADKVLPQRIRELVPESQAYMDLLAFER
KLDQTIARKRMEIQEAIKKPLTQKRKLRIYISNTFSPSKVEGDSAGTAGTPGGTPAGDKV
ASWELRVEGKLLDDPSKQKRKFSSFFKSLVIELDKELYGPDNHLVEWHRMPTTQETDGFQ
VKRPGDLNVKCTLLLMLDHQPPQYKLDPRLARLLGVHTQTRAAIMQALWLYIKHNQLQDG
HEREYINCNRYFRQIFSCGRLRFSEIPMKLAGLLQHPDPIVINHVISVDPNDQKKTACYD
IDVEVDDPLKAQMSNFLASTTNQQEIASLDVKIHETIESINQLKTQRDFMLSFSTDPQDF
IQEWLRSQRRDLKIITDVIGNPEEERRAAFYHQPWAQEAVGRHIFAKVQQRRQELEQVLG
IRLT
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atggagggactgggctttgggcctcgccgggccctgcccctgacctatgcgccccccatg
ccctacttcccgcagcggcctggcatgtcacctgggagccgcatgcccatggctggcctg
caggtgggactccctgccggcgccccgtttggtgcagctgctccactccgacctggcatg
ccacccaccatgatggacccattccgaaaacgcctgctcgtgccccaggcccagcccccg
atgcccgcccagcgccgggggctgaaaaggaggaagatggcagacaaggttctacctcag
cgcattcgggagcttgtcccagagtctcaggcatacatggacctcttggcttttgagagg
aagctggaccagaccattgctcgaaagcggatggagatccaggaggccatcaaaaagcct
ctgacgcaaaaacggaaactgcggatctatatttccaacacgttcagtcccagcaaggtg
gaaggtgacagcgcaggaactgcagggacccccgggggaaccccagcaggggacaaggtg
gcttcctgggagctccgagtggaggggaaactgctggatgaccctagcaaacagaagagg
aagttttcttccttctttaagagcctcgtcatcgagctagacaaggaactctacgggcct
gacaatcacctggtggagtggcaccggatgcccaccacccaggagacggatggcttccag
gtgaagagaccgggagacctcaatgtgaagtgcaccctcctgctcatgctggaccatcag
cctccgcagtacaaactggacccccgactggcaaggctgctgggggtgcacacccagacg
agggcggccatcatgcaggccctgtggctgtacatcaaacacaaccagctgcaggacggc
cacgagcgcgagtacatcaactgcaaccgttacttccgccagatcttcagttgcggccgt
cttcgtttctcggagattcccatgaagctggccgggttgctgcagcatccagaccccatc
gtcatcaatcacgtcattagtgtggaccccaatgaccagaagaagacagcctgttatgac
attgatgtggaggtagacgaccccctcaaggcccagatgagcaatttcctggcctctacc
accaatcagcaagagattgcctccctggacgtcaagatccacgagaccattgagtccatc
aaccagctgaagacccagagggactttatgctcagcttcagcactgacccccaggacttt
atccaggaatggctccgttcccagcgccgagacctcaagatcatcactgatgtcatcggg
aaccccgaggaggagaggcgagccgctttctatcaccagccttgggcccaggaagccgtg
gggagacacatctttgctaaggtgcagcagcgaaggcaggaactggaacaggtgctggga
attcgcctgacctaa
DBGET
integrated database retrieval system
