Sorex araneus (European shrew): 101553866
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Entry
101553866 CDS
T07854
Symbol
DDX18
Name
(RefSeq) ATP-dependent RNA helicase DDX18 isoform X1
KO
K13179
ATP-dependent RNA helicase DDX18/HAS1 [EC:
5.6.2.7
]
Organism
sara
Sorex araneus (European shrew)
Brite
KEGG Orthology (KO) [BR:
sara00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sara03041
]
101553866 (DDX18)
03009 Ribosome biogenesis [BR:
sara03009
]
101553866 (DDX18)
Enzymes [BR:
sara01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
101553866 (DDX18)
Spliceosome [BR:
sara03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
101553866 (DDX18)
Ribosome biogenesis [BR:
sara03009
]
Eukaryotic type
90S particles
Helicases
101553866 (DDX18)
Pre-60S particles
101553866 (DDX18)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
Motif
Other DBs
NCBI-GeneID:
101553866
NCBI-ProteinID:
XP_004608220
LinkDB
All DBs
Position
Unknown
AA seq
672 aa
AA seq
DB search
MSHLPMKLLRKKIEKRNLKLRQRNLKLQGKRRQGLSEPQNGDVSAETAEIRKVKASLKLS
VNGGLSEVQNGQVSEEKVKNLKIETSPKKSAVLTNGEEAIQSPNLESKKKKRKKKKRKMV
DGAAGPDTKKAKIEDKEESEEDGAQAPEETENVERPDNEEDDSEVPSLPLGLTGAFEDTS
FASLSNLVNENTLKAIKEMGFTNMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPAV
ELIVKLKFMPRNGTGVLILSPTRELAMQTFGVLKELMTYHVHTYGLIMGGSNRSAEAQKL
GNGINIIVATPGRLLDHMQNTPGFMYKNLQCLVIDEADRILDVGFEEELKQIIKLLPTRR
QTMLFSATQTRKVEDLARISLKKEPLYVGVDDDKTNATVDGLEQGYVVCPSEKRFLLLFT
FLKKNRKKKLMVFFSSCMSVKYHYELLNYIDLPVLAIHGKQKQNKRTTTFFQFCNADSGI
LLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTARGLNGRGHALLILRPEELGFL
RYLKQSKVPLSEFEFSWSKISDIQSQLEKLIEKNYFLHKSAQEAYKSYIRAYDSHSLKQI
FNVNSLNLPQVALSFGFKVPPFVDLNVNTNDSKQRKRGGGGGFGYQKTKKVEKSKIFKHI
SKKASNSRQFSH
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atgtctcacctccccatgaaactgctgcgcaagaagatcgagaagcggaatctaaagctg
cggcagcgcaacctgaagctgcagggtaagaggcggcagggcctctcagaacctcagaac
ggagatgtgtctgcagaaacagcagagattagaaaagttaaagcttctctaaaactgtct
gtgaatgggggcttgtcagaggtacaaaatggacaagtgtctgaagaaaaggtgaaaaat
ctaaaaatagaaacatcccccaagaaatctgctgtgctgaccaatggggaagaggcaata
cagtctcctaacttagaatcaaagaagaagaagaggaagaagaaaaagagaaaaatggtg
gatggtgctgctggtcctgataccaaaaaagcaaaaattgaagacaaagaggaatctgaa
gaagatggagctcaggctcctgaagaaacagagaatgtggagaggccagacaatgaggaa
gatgacagtgaggtgcccagcctgcctctcgggctgacaggagcctttgaggatacttca
tttgcttctctgagtaatcttgtcaatgagaatactttgaaagctatcaaagaaatgggc
tttacaaacatgactgaaattcaacataaaagtatccgaccacttctggaaggcagggat
cttctcgcagctgcaaaaacagggagtggcaaaaccttggcgtttctcatccctgcagtt
gagctcattgttaagttgaaattcatgcccaggaatggaacaggagtccttattctctca
cctacaagggaactggccatgcagaccttcggtgttcttaaggagctaatgacttaccat
gttcacacttacgggttaataatgggcggcagtaacaggtctgctgaagcacagaaactc
ggtaatgggatcaacatcatcgtggctacaccaggtcgtctcctggaccatatgcagaat
acccctggatttatgtataaaaacctacagtgcctggttattgatgaggctgatcgtatc
ttagatgttgggtttgaagaggaattaaagcaaattattaaacttctgccaacgcgcagg
cagaccatgctcttctccgccacacagactcgaaaggttgaagacctggcgaggatttct
ctgaaaaaagagccgctctatgttggggttgatgatgacaagacaaatgcaacagtcgat
ggtcttgagcaggggtatgttgtttgtccctccgaaaagagattccttctgctcttcact
ttccttaagaagaaccgaaagaagaaactaatggttttcttttcatcttgtatgtctgtg
aaatatcactacgagttgctgaactacattgatttgcctgtcttagccattcatggaaag
caaaagcagaataagcgaacaaccaccttcttccagttctgcaatgcggattcaggaata
ctgctgtgtacagacgtggcagctagagggctagatattcctgaagttgactggattgtt
cagtatgaccctccagatgaccccaaggaatatatccatcgtgtgggtagaacagccaga
ggcctgaacggaagagggcatgccttgctcattctgcgccctgaagagttgggttttctt
cgttacttgaagcagtccaaggttccattaagtgagtttgagttttcctggtccaaaatt
tctgatattcagtcccagcttgaaaagttgattgaaaagaactacttccttcataagtcg
gcccaggaagcatataagtcctacatccgagcctacgattcccattctctgaagcagatc
ttcaatgtcaatagcttaaatctgcctcaggtggctctgtcatttggtttcaaggtgcct
ccttttgttgatctgaatgtgaacaccaatgacagcaagcagagaaagaggggaggtggt
gggggatttggctaccagaaaaccaagaaagtggagaagtccaagatcttcaaacatatt
agtaagaaagcatccaacagtcggcagttctcccactga
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