Sorex araneus (European shrew): 101554033
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Entry
101554033 CDS
T07854
Symbol
ERCC6
Name
(RefSeq) DNA excision repair protein ERCC-6
KO
K10841
DNA excision repair protein ERCC-6
Organism
sara
Sorex araneus (European shrew)
Pathway
sara03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sara00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
101554033 (ERCC6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sara03036
]
101554033 (ERCC6)
03400 DNA repair and recombination proteins [BR:
sara03400
]
101554033 (ERCC6)
Chromosome and associated proteins [BR:
sara03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
101554033 (ERCC6)
DNA repair and recombination proteins [BR:
sara03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
101554033 (ERCC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HDA2-3
Motif
Other DBs
NCBI-GeneID:
101554033
NCBI-ProteinID:
XP_004607450
LinkDB
All DBs
Position
Unknown
AA seq
1493 aa
AA seq
DB search
MPNESDFQSSQTEERDCLQSQPVGDNEEMTIKPEDNGPAEVGDSGPSCSSASEPSTALEG
HPSEGPRRGLALLHIDRHQIQAVEPSAQALELQGLGVDVYDQDVLEQGVLRQVDSAIHEA
GRAAQVADAEKEYRSVLDDLTSCTTSLRQINKIIEQLSPQAATNRDINRKLDSVKRQKYN
KEQQLKKITAKQKRLQAILGGAEVRVEMDHASLEVEDEEPGPSSLGSMLMPVQETAWEEL
IRTGQMTPFGTQIPQKQEKKPRKLMLDEESGFEKYLADQAKLSFERKKQASARRVAKKAQ
TSVSSELSSALGETKPKKGSQALSKTDARLKKHLRKLQRRALRLQGSLGLPRGKKPPECD
GKLKAEGDSEGEESEYLPSEEEAEEEEEEEEEEERAGARLSEGSGCEPRSAAKGRKRPKK
VTAQEIDDDFFPSSEDEAEAPGGGGAGGRGRKVVRCRDDGDEEYFKQRLRRWNKLRLQDK
EKSLKLEDDSEESDAEFDEGFKMPGFLFKKLFKYQQTGVRWLWELHCQQAGGILGDEMGL
GKTIQIIAFLAGLSYSKIRTRGSNYRFEGLGPSIIVCPTTVMHQWVKEFHTWWPPFRVAI
LHETGSYTHKKAKLVREIAHCHGILITSYSYIRLMQDDISRHDWHYVILDEGHKIRNPNA
AVTLACKQFRTPHRIILSGSPMQNNLRELWSLFDFIFPGKLGTLPVFMEQFSVPITMGGY
SNASPVQVKTAYKCACVLRDTINPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQHKVY
QNFIDSKEVYGILNGEMQVFSGLIALRKICNHPDLFSGGPKNVRGGPEDALEEDQFGYWK
RSGKMIVVESLLKIWHKQGQRVLLFSQSRQMLNILEVFLRAQNYSYLKMDGTTTIASRQP
LITRYNEDTSIFVFLLTTRVGGIGVNLTGANRVIIYDPDWNPSTDTQARERAWRIGQKKQ
VTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLKDPKQRRFFKSNDLYELFTLTSPDASQST
ETSAIFAGTGSDVQTPKSHLKRKPQAAFGTNHSAPGHPKFPGTSTSADDVTSAKKKLATL
GTEVNAVTSNQGNPLKDAPETTSALTGSDRLGEEVKAVPRPEESAELSGNGDFATSPRIS
ETHGTAGMEGLEGKEGLSAKKESCQIQTELPWESEQMENNSYKRKSKTKHSVAEEATLEK
PLTPKQKKSKHHRDAKFEGTRVPHLVKKRQYQKEDNEEESKPKEQSHDDYVLEKLFKKSV
GVHSVMRHDAIMDGASPDYVLVEAEANRVAQDALKALKLSRQRCLGAVSGVPTWTGHRGS
SGAPIGVKSRFGQKKNSRFSLPHPSTSPKEKCQDGLAKKDGKDHVSEHFSGKGENAESSS
GAPTSSSLLAKMRARNHLILPERLESENVHLPEAPVSQPSATEHDDLLVEMRNFIAFQAR
VDGQATTQEILQEFESRLSASQSCVFRELLRNLCTFHRTSSGEGIWKLKSEYC
NT seq
4482 nt
NT seq
+upstream
nt +downstream
nt
atgccaaatgagagtgacttccagtcaagtcaaacggaggagcgagactgcttacaaagt
cagcctgtcggtgataatgaagaaatgaccattaagccagaagacaatggccctgcggag
gtgggggacagcggtccctcctgttcctctgccagtgagccatccactgctctggagggg
cacccgtccgagggtccgagaagagggctggccctgctgcacatcgacaggcatcagatc
caggcagtggagcccagtgcgcaggcccttgagcttcagggcttgggggtggacgtctac
gaccaggatgtgctggagcaaggggtgcttcggcaggtggacagcgccatccatgaggcc
ggccgggcagcacaggttgctgacgcagagaaagagtaccgctccgtcctggatgacctc
acgtcatgtacaacatccctaaggcaaatcaataaaattattgaacaacttagcccacaa
gctgccaccaacagagatatcaacaggaaactagattctgtaaaacggcagaagtataat
aaggaacaacaactaaagaagatcacagcaaaacagaaacgtctgcaggccatccttggt
ggcgcagaggtcagggttgaaatggatcatgccagtctggaagtggaagacgaagagcca
gggccttcctccctgggcagcatgctcatgcctgttcaggagaccgcgtgggaagagctg
atccgcaccggccagatgacaccgtttggtacccagatccctcagaaacaggagaagaaa
cctaggaaactcatgctcgacgaagagtccggctttgagaagtatctggcggatcaggca
aaactgtcttttgaaaggaagaagcaagctagtgctcggagagtggctaaaaaagctcag
acctcggtcagctctgagctgagctcggccctcggcgagaccaagccaaagaaaggaagc
caggctctctctaagacagatgcgcgcctgaagaagcacctccggaagctgcagcggagg
gccctccggctccaggggagcctgggcttgcccaggggaaagaagcctccggagtgcgac
ggaaagctgaaggcagagggagactccgagggggaagagtcggagtacttgccctcggag
gaggaggcggaggaggaggaggaggaggaggaggaggaggaacgagcaggggccagactg
tcagaaggctccggctgtgagcccaggtctgcagccaagggcaggaaacggccaaagaaa
gtcacagcgcaggaaattgatgatgacttcttcccaagctccgaagatgaagccgaagcc
ccgggaggagggggagcaggaggacggggccggaaggtggtgagatgccgggatgatgga
gacgaagagtactttaagcagcggctaaggagatggaataaactgagactgcaggacaaa
gagaaatctctgaagcttgaagatgattctgaggaaagtgatgctgaatttgatgaaggt
tttaaaatgccaggttttctgttcaaaaagctttttaagtaccagcagacaggtgttcgg
tggctgtgggaattgcactgccagcaggcaggaggaattctgggagatgaaatgggattg
ggcaagaccatccagataattgccttcttggcaggtctgagctacagcaagatcaggact
cgtggttcaaattacaggttcgaggggttgggtccctctataatagtctgtccgacaacg
gtgatgcatcaatgggtaaaggaatttcacacatggtggcctcctttcagagtggcaatt
ctacatgaaacgggctcctatacccacaaaaaggcaaaacttgttcgagaaattgctcat
tgtcacggaattttgattacttcttactcctacatccgactgatgcaggatgacatcagc
cggcacgactggcactatgtgatcttggatgaagggcacaaaattaggaaccccaatgct
gccgtcacccttgcttgcaaacagttccgtaccccgcatcgcatcatcttatctggctct
ccaatgcaaaataacctccgagagctgtggtcgctctttgactttatctttccgggaaag
ctcggcaccttgcctgtgtttatggagcagttctcggtccccatcaccatggggggatac
tcaaatgcttcgcccgtacaggtgaaaactgcttataagtgtgcgtgtgtcttacgggat
accataaatccatacctgcttcggagaatgaagtcagatgtcaaaatgagcctttcgtta
cctgataaaaatgaacaggtcttattttgtcgtcttactgatgagcaacataaagtctac
cagaatttcattgactccaaagaagtttacggaattctcaacggagaaatgcaggttttc
tctggacttattgccctgagaaaaatctgcaaccatcctgatctcttctctggaggcccc
aagaatgttagaggtggtcccgaggatgccctagaggaagatcagtttggatactggaaa
cgttccgggaagatgatagttgtcgagtccctattgaaaatatggcacaagcagggccag
cgagttttgctgttttctcagtcaagacagatgttgaacatacttgaagtattccttaga
gcccaaaattactcttatctcaagatggatggtactactacaatcgcatcgagacagcct
ctgattacaagatacaatgaggacacatccatttttgtgtttctgctgaccactcgagtg
ggtggcattggcgtcaacctgaccggtgccaacagagtcatcatctacgaccccgactgg
aaccccagcacggacacacaggcccgggagcgcgcgtggaggatcggacagaagaagcag
gtgacggtatacaggctgctgactgcaggcaccattgaagagaagatttaccaccgacaa
atcttcaagcagtttttgacaaacagagtgctaaaagatccaaagcaaaggcggtttttc
aaatccaatgatctttatgagctctttactctgactagtcctgacgcgtctcagagcact
gaaacaagcgctatttttgcaggaactggttcagatgttcagacacccaaaagccattta
aagagaaaacctcaagcagcctttggaacaaaccatagtgctccaggtcacccaaagttc
cctgggactagcacatctgcggatgatgtcacatcagctaaaaaaaaattggcaactcta
ggaaccgaagtaaatgcagtgacttcgaatcaagggaatcctttgaaagatgccccggaa
acaaccagtgctctcacgggcagtgacagacttggagaggaggtgaaagcagtgcctaga
ccagaggagtcagcagagttgagtggaaatggggactttgccacatctccaagaatcagt
gagacacacgggacagctggcatggaaggcctcgagggaaaggagggtctttctgctaag
aaagaaagctgccagatccaaacagaactgccttgggagagtgaacaaatggaaaataat
tcttataagcgcaagtccaaaaccaaacacagtgtggcagaagaagcaaccctggagaaa
cctctgaccccaaagcagaagaagtccaagcatcacagagatgccaagtttgaaggcact
cgggtcccccacctggtgaagaaacggcagtaccagaaggaagacaacgaagaggagagc
aagcccaaggaacagagccatgacgattacgttctggaaaagcttttcaaaaaatccgtg
ggtgttcacagcgtcatgagacacgatgccatcatggacggagccagtcccgattatgtg
ctggttgaggcggaggccaaccgtgtggcccaggatgccttgaaggcactgaagctctct
cgtcagaggtgtctgggagccgtgtctggtgttcccacctggacgggccacagggggagt
tccggcgcaccaataggagtaaagagtagatttggtcagaaaaagaactccaggttttct
ctgccacatccttcaacatctccaaaggaaaaatgccaggatggccttgcaaaaaaggac
ggaaaagatcatgtttctgaacattttagtggaaagggtgaaaatgcagagtcttcatca
ggggctcccacgtcctcctcactgttggctaaaatgagggccagaaaccacctgattttg
ccagagcggttagaaagcgaaaacgtgcatcttccggaggctccggtctcacagccctcg
gccacagaacatgacgaccttctggtggagatgagaaacttcattgctttccaggcccgg
gttgacggccaggccaccacacaggagattctgcaggagtttgaatccagattatcagcg
tcacagtcctgtgtctttcgagaactgttgagaaatctgtgcactttccatcggacttca
agtggtgaaggaatttggaaactcaagtcagaatactgctga
DBGET
integrated database retrieval system
