Sorex araneus (European shrew): 101554047
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Entry
101554047 CDS
T07854
Name
(RefSeq) nuclear RNA export factor 2-like
KO
K14284
nuclear RNA export factor
Organism
sara
Sorex araneus (European shrew)
Pathway
sara03008
Ribosome biogenesis in eukaryotes
sara03013
Nucleocytoplasmic transport
sara03015
mRNA surveillance pathway
sara05014
Amyotrophic lateral sclerosis
sara05164
Influenza A
sara05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
sara00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
101554047
03015 mRNA surveillance pathway
101554047
03008 Ribosome biogenesis in eukaryotes
101554047
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
101554047
05168 Herpes simplex virus 1 infection
101554047
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
101554047
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sara03019
]
101554047
03009 Ribosome biogenesis [BR:
sara03009
]
101554047
Messenger RNA biogenesis [BR:
sara03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
101554047
mRNA cycle factors
Stress granule specific factors
101554047
Ribosome biogenesis [BR:
sara03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
101554047
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_NXF1-5
NXF_NTF2
Tap-RNA_bind
TAP_C
NTF2
LRR_4
UBA_8
CBM_20
Motif
Other DBs
NCBI-GeneID:
101554047
NCBI-ProteinID:
XP_004611751
LinkDB
All DBs
Position
Unknown
AA seq
679 aa
AA seq
DB search
MDQAHRFLSCENYEESPQITGPVSENPAIMADVVHIDPMTMHYATLTVFPSSIWEASPRN
SGTPLAVSLLQDEEYDDDYSSSQRRKGLSSFQDNYWKKNLGQYYHDEYESNPSQLKENRK
KKRKNSHRNFRVRYKPYTVRNKRRVRWQCEGNISVTVWADKKSPEIGTGDNSQNESLGKW
FKITIPYGRKYDKMWLITTIQSHCSVSFTPVDFHYVKSRARFFTQDPRVACALRDVSCKI
LDEENRKICIFVSQSFEPFSVRNKLKPEEMEQLELTMIKRYDDSQKSLDLQKLRYDPDLV
NHAIDIVLNRRNCMFAVLQIIERSFPELLSLNLRNNKLHQLDGLSDITQKVTTIKILDLS
KNELKSMWELSKIKTLNLEELCLKGNPLCETFPDSSSYISAIQDYFPTLLCLDGLKLCQP
VNDNVSLPMNLCKEKKDSHSLKNMIMHFLKQYYWIYDCGDRRGLLDAYHDDACFSLSIPF
NDEDPSSSHLCEYLKDNKNMKILKDPDLRAQLLKHTKHDIVRFLCVLPQTQHDIDSIMID
MWMQSGTMICFSVHGVFREVDKNYQDSLCTFTRTFITVPARNPSLCIMNDEFFVRISTPS
LLKSAFSIRLYTLSSSSVPILSKDQKDMIRTFSIHSGMNVQSSHKCLEDNNWNYRIAFQN
FIRMKNEGKIPEEAFQETP
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atggatcaagctcatagatttttatcttgtgaaaattatgaggaaagtccacagatcaca
gggccagtctcagaaaaccctgcaatcatggcggacgttgttcacatagatcctatgacc
atgcactatgcaacgcttacggtcttccccagcagtatttgggaagccagtccaaggaat
agtggcacaccgttggcagtttcactgctccaagacgaagaatatgatgatgattatagc
tcatctcaaagaagaaaaggtttgagttccttccaagataattattggaagaaaaacctt
ggtcaatattatcatgatgaatatgaatctaatccttcacaacttaaggagaatagaaag
aagaaacggaagaatagccacaggaacttccgcgtaagatacaaaccctacaccgtcaga
aacaagaggagagtgagatggcaatgcgaaggcaatatcagtgttactgtgtgggcagat
aaaaaatctccagaaattggaacaggagataattcacaaaatgaaagcctggggaaatgg
ttcaagatcacaattccctatgggagaaagtatgacaagatgtggctcatcaccaccatc
caaagccattgcagtgtgtcctttactccagtggattttcactatgtgaagagccgggct
aggtttttcacccaggatcctcgtgttgcctgtgcattgagggatgtcagctgtaagatt
cttgatgaggagaaccgaaagatttgtatctttgtcagtcaatcttttgagcccttctct
gtgcggaataaattgaagccagaagaaatggagcagctagagctgaccatgataaaaagg
tacgacgattcccagaaatctcttgatctccaaaagctccgctatgacccagacttggtg
aaccatgctattgatatagtcctgaatcgaagaaactgcatgtttgctgtcctgcagatc
atagaaaggagtttccctgagctgttatctttgaacttgcgcaacaacaaactgcaccag
cttgatggcttgtctgatattacacagaaggtcactacaatcaaaatcctggacctctcc
aaaaatgaactgaagtcgatgtgggagctgagcaagatcaaaacactgaatcttgaagag
ttgtgcctgaaagggaaccccctgtgtgaaacctttccagacagttcctcctacataagt
gctatccaggattattttcccacattattgtgtctggatggcctgaagttatgccagcca
gttaatgacaatgtttccctcccgatgaacctttgcaaggaaaagaaagactcacactca
ctgaagaatatgattatgcatttccttaagcagtattactggatctatgattgtggagac
cggcggggtctcctggatgcttaccatgatgatgcctgcttctctctgtctattcccttc
aacgatgaagatccatcttcaagccacttgtgtgagtatttaaaggacaataagaatatg
aagatactcaaggatcctgatctgcgggcacagctgctaaagcatacaaagcatgacatt
gtgcgtttcctctgcgtattgcctcagacacagcatgacatcgatagcattatgatagac
atgtggatgcagtcgggaaccatgatctgcttttctgtccatggggtgttcagagaagtg
gacaaaaactatcaggattctctttgtacctttacccggaccttcatcactgtccctgcc
agaaatcccagcctgtgcatcatgaatgatgaattttttgtgaggatctccactccgagt
ttgctcaagagtgcattttctatccgactgtacacactttcctccagttctgtgcccatt
ttatccaaggaccagaaggatatgattcgcacattctctatccactctgggatgaacgtt
cagtcttctcataagtgccttgaggacaacaattggaactacagaatagcttttcagaac
ttcattaggatgaagaatgaaggaaagatcccagaagaggcctttcaagaaactccctaa
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