Sorex araneus (European shrew): 101554330
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Entry
101554330 CDS
T07854
Name
(RefSeq) RNA-binding protein 39-like
KO
K13091
RNA-binding protein 23/39
Organism
sara
Sorex araneus (European shrew)
Brite
KEGG Orthology (KO) [BR:
sara00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sara03041
]
101554330
Spliceosome [BR:
sara03041
]
Common components
Common spliceosomal components
General mRNP proteins
101554330
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RRM_5
RBD_DEAH11
RSRP
RRM_7
IHO1
Motif
Other DBs
NCBI-GeneID:
101554330
NCBI-ProteinID:
XP_004614138
LinkDB
All DBs
Position
Unknown
AA seq
502 aa
AA seq
DB search
MADDIDIEAMLEAPYKKDENKLSSANGHEERSKKRKKSKSRSRSHERKRSKSKERKRSRD
RERKKSKSRERKRSRSKERRRSRSRSRDRRFRGRYRSPYRRRSRSKSPFRKDKSPVREPI
DNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFV
DVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSAGPMRLYVGFLHFNIT
EDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMK
VGHVTERTDASSASSFLDSDELERTGIDLGTTGRLQLMARLAEGTGLQIPPAAQQALQMS
GSLAFGAVADLQTRLSQQTEASALAAAASVQPLATQCFQLSNMFNPQTEEEVGWDTEIKD
DVIEECNKHGGVIHIYVDKNSAQGNVYVKCPSIAAAIAAVNALHGRWFAGKMITAAYVRL
PTYHNLFPDSMTATQLLVPSRR
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgatattgatattgaagcaatgcttgaggctccttacaagaaggatgagaac
aagttgagcagtgctaacggccatgaagaacgtagcaaaaagaggaaaaaaagcaagagc
agaagtcgtagtcatgaacgtaaaagaagcaaaagtaaggaacggaagcgaagtcgagat
agagaacggaaaaagagtaaaagtcgtgaaaggaagagaagtagaagcaaagaaagaaga
cgaagtcgttcaagaagtcgagatcgcagattcagaggccgctacagaagtccttacaga
agacgttctcgaagcaaaagtccattcagaaaagacaagagccctgtgagggaaccaatt
gataatttaactcctgaggaaagagatgcaaggacagttttctgcatgcagttggcagct
agaattcggccacgggatttggaagagtttttctctacagtaggaaaggttcgagatgtg
aggatgatttctgacagaaattcaagacgttctaaaggaattgcttatgtggaatttgtt
gacgttagctctgttcctctagctataggattaactggccagcgtgttttaggagtgccc
atcatagtacaggcatcccaggccgaaaaaaacagagctgcagcaatggcaaacaatcta
caaaagggaagtgctggacctatgaggctttatgtgggcttcttacattttaacataacc
gaggatatgctcaggggaatctttgagccttttggaaggattgaaagcatccagctcatg
atggatagtgaaacaggacgatccaaggggtatggatttatcacgttttctgattcagaa
tgtgccaagaaggctttggaacaacttaatggatttgagttagcaggaagaccaatgaaa
gttggccatgttactgaacgaactgatgcttccagtgctagctcatttttggacagtgat
gaactggaaaggactggaattgatttgggaacaaccggtcgcctacaattaatggcaagg
cttgcagaaggtacaggtttgcaaattccaccagcagcacagcaagctctacaaatgagt
ggctctttggcatttggtgctgtggcagatttgcaaacaagactttctcaacagacggaa
gcttcagctttagctgcagctgcttctgttcagccacttgcaacacaatgctttcaactc
tctaacatgtttaaccctcaaacagaagaagaagtcggatgggataccgagattaaagat
gatgttatcgaagaatgtaataaacatggtggagttattcatatttatgttgataaaaat
tcagctcagggcaatgtgtatgtgaagtgcccatccattgctgcagccattgctgcagta
aatgcattgcatggcaggtggtttgctggaaaaatgataacagcagcgtatgtacgtctt
ccaacttatcacaacctcttccctgattctatgacagcgacacaactactggttccaagt
agacgatga
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