Sorex araneus (European shrew): 101554484
Help
Entry
101554484 CDS
T07854
Symbol
VPS16
Name
(RefSeq) vacuolar protein sorting-associated protein 16 homolog isoform X1
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
sara
Sorex araneus (European shrew)
Pathway
sara04140
Autophagy - animal
sara04148
Efferocytosis
sara05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
sara00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
101554484 (VPS16)
04148 Efferocytosis
101554484 (VPS16)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
101554484 (VPS16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sara04131
]
101554484 (VPS16)
Membrane trafficking [BR:
sara04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
101554484 (VPS16)
Hops complex
101554484 (VPS16)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
Motif
Other DBs
NCBI-GeneID:
101554484
NCBI-ProteinID:
XP_004611016
LinkDB
All DBs
Position
Unknown
AA seq
839 aa
AA seq
DB search
MDCYTANWNPLGDSAFYRKYELYSMDWDLKDELRDCLVAAAPYGGPIALLRNPWRKEKSV
SIRPVLEIYSASGMPLANLLWKSGPVVSLGWSAEEELLCVQEDGVVLVYGLHGDFRRHFS
MGNEVLQNRVLDARIFHTEFGSGVAILTGAHRFTLSANVGDLKLRRMPEVPGLQSAPSCW
TTLFQERVVHVLLAVGPDLYLLDHAACSAVTLPGLPPGVSSFLQMAVSFTNRHLALFTDT
GCVWMGTASLKEKLCEFNCNIRAPPKQMVWCSRPRSKERAVVVAWEKRLMVVGDAPESIQ
FVLDEDSYLVPELDGVRIFSRSTHEFLHEVPAASEEIFKIASMAPGALLLEAQKEYEKES
QKADEYLREIQELGQLSQAVQQCIEAAGHEHQPDMQKSLLRAASFGKCFLDRFPPDSFVR
MCQELRVLNAVRDYHIGIPLTYSQYKQLTIQVLLDRLVLRRLYPLAIQICEYLRLPEVQG
VSRILAHWACYKVQQKDVSDEDVARAINQKLGDTPGVSYSDIAARAYGCGRTELAIKLLE
YEPRSGEQVPLLLKMKRSKLALSKAIESGDTDLVFTVLLHLKNELNRGDFFMTLRNQPMA
LSLYRQFCKHQELETLKDLYNQDDNHQELGSFHIRASYTAEERIEGRVAALQTAADAFYK
AKNEFAAKATEDQMRLLRLQRRLEDELGGRFLNLSLHDTVTALILGGHSKRSEQLARDFR
IPDKRLWWLKLTALADLGDWEELEKFSKSKKSPIGYLPFVEICMKQHNKYEAKKYTSRVS
PEQKVKALLLVGDVSQAADVAIEHRNEAEMSLVLSHCTGATDGATGDKIQRARAQAQKK
NT seq
2520 nt
NT seq
+upstream
nt +downstream
nt
atggattgctacacggcgaactggaacccgctgggggattcggccttttaccggaagtat
gagttgtacagcatggactgggacctgaaggacgagctccgggactgcctggtagcggct
gcgccctatgggggccccatcgcgctgctcaggaacccctggagaaaggagaagtctgtc
agtatccggccggtgctggagatctactcagcttctggcatgcccctggccaatctgctg
tggaagagcggcccggtggtgtccctgggctggtcggctgaggaggagctgctgtgcgtg
caggaagacggcgtggtgctggtgtacgggcttcacggggacttccggaggcacttcagc
atgggcaacgaggtgctccagaaccgggttctcgatgcccgcatctttcatacggagttc
ggttctggcgtggccatcctcactggggcccaccgcttcacgctgagcgccaatgtcggc
gacctcaaactgcgccggatgccggaggtgccaggcctgcagagcgcgccctcgtgctgg
accacgctgttccaggagcgcgtggtgcacgtcctcctggccgtggggcctgacctgtac
ctgctggaccatgccgcctgctccgcagtgacgctgccaggcctgcccccaggagtgagc
agcttcctgcagatggcagtctccttcaccaaccgccacctggccctcttcacggacacc
ggctgcgtctggatggggacagcgtcactcaaggagaagctgtgcgagttcaactgcaac
atccgcgcccccccaaagcagatggtctggtgtagccgtcctcggagcaaggagcgggcc
gtcgtggtggcctgggagaagaggctgatggtggtgggtgatgcacccgagagcatccag
tttgtgctggatgaggactcctacctggtgcctgagctggatggggtccggatcttctct
cgcagcacccacgagttcctgcatgaggttccagcggccagtgaggagatcttcaaaatc
gcctcgatggcccctggagcgctgctgttagaggcccagaaggagtatgagaaagagagc
cagaaggcggacgagtacctgcgggagatccaggagctggggcagctgagccaggccgtg
cagcagtgcatcgaggcggcggggcacgagcaccagcctgacatgcagaagagcctgctc
cgggcggcctccttcgggaagtgcttcctcgaccggttcccccccgacagctttgtgcgc
atgtgccaggagctgcgcgtgctcaacgcggtccgggactaccacatcggcatcccgctc
acctacagccaatacaagcagctcaccatccaggtgctgttggacaggcttgtgttgcgg
aggctttacccactggccatccagatatgcgagtacctgcggcttcccgaagtgcagggt
gtcagccggatcctggcccactgggcctgctacaaggtgcagcagaaggatgtgtctgat
gaggacgtcgctcgggccattaaccagaagctgggggacacgcctggcgtctcttactca
gatattgctgcgcgggcctatggctgtggccgcacagagttggccatcaagctgctggag
tatgagccgcgctctggggagcaggtaccccttctcctcaagatgaagcggagcaaactg
gccctgagcaaggctatcgagagtggggacacggacctggtgttcactgtgctgctgcac
ctgaagaacgagctgaaccgaggcgatttcttcatgacccttcggaaccagcctatggcc
ctgagtctgtaccgacagttctgcaagcatcaggagctcgagacgctgaaggacctctac
aaccaggacgacaaccaccaggagctgggtagcttccacatccgagccagctacacggca
gaggagcgcatcgagggccgagtcgctgctctgcagacagccgctgacgccttctacaag
gccaagaatgagtttgcagccaaggccacagaggatcagatgcggctcctccggctacag
cggcgcctggaagatgaattgggcggccggttcctgaacctgtccctgcacgacaccgtc
accgccctcatcctgggcggccacagcaagcgctcggagcagctggcccgcgacttccgc
atccctgacaagaggctctggtggctgaagctgacagccctggccgatctgggcgactgg
gaggagctcgagaagttttcaaagagcaagaaatcacccatcggctacctgccctttgtg
gaaatctgcatgaagcaacataacaaatacgaggccaagaagtacacgtcccgcgtgagt
cctgagcagaaggtcaaggccttgcttcttgtcggggatgtgtctcaggcggcagacgtg
gccattgagcaccggaatgaggcagagatgagtcttgtgttgtcccactgcactggagcc
acagatggggctacaggcgacaagattcagcgggccagggcgcaagcccagaagaagtga
DBGET
integrated database retrieval system
