Sorex araneus (European shrew): 101554563
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Entry
101554563 CDS
T07854
Symbol
SMC1A
Name
(RefSeq) structural maintenance of chromosomes protein 1A
KO
K06636
structural maintenance of chromosome 1
Organism
sara
Sorex araneus (European shrew)
Pathway
sara04110
Cell cycle
sara04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
sara00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
101554563 (SMC1A)
04114 Oocyte meiosis
101554563 (SMC1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sara03036
]
101554563 (SMC1A)
Chromosome and associated proteins [BR:
sara03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
101554563 (SMC1A)
Meiosis-specific proteins
Cohesin complex and associated proteins
101554563 (SMC1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_21
AAA_15
AAA_29
ABC_tran
Mce4_CUP1
Motif
Other DBs
NCBI-GeneID:
101554563
NCBI-ProteinID:
XP_004606529
LinkDB
All DBs
Position
Unknown
AA seq
1233 aa
AA seq
DB search
MGFLKLIEIENFKSYKGRQIIGPFQRFTAIIGPNGSGKSNLMDAISFVLGEKTSNLRVKT
LRDLIHGAPVGKPAANRAFVSMVYSEEGAEDRTFARVIVGGSSEYKINNKVVQLHEYSEE
LEKLGILIKARNFLVFQGAVESIAMKNPKERTALFEEISRSGELAQEYDKRKKEMVKAEE
DTQFNYHRKKNIAAERKEAKQEKEEADRYQRLKDEVVRAQVQLQLFKLYHNEVEIEKLNK
ELASKNKEIEKDKKRMDKVEDELKEKKKELGKMMREQQQIEKEIKEKDSELNQKRPQYIK
AKENTSHKIKKLEAAKKSLQNAQKHFKKRKGDMDELEKEMLSVEKARQEFEERMEEESQS
QGRDLTLEENQVKKYHRLKEEASKRAATLAQELEKFNRDQKADQDRLDLEERKKVETEAK
IKQKLREIEENQKRIEKLEEYITTSKQSLEEQKKLEGELTEEVEMAKRRIDEINKELNQV
MEQLGDARIDRQESSRQQRKAEIMESIKRLYPGSVYGRLIDLCQPTQKKYQIAVTKVLGK
NMDAIIVDSEKTGRDCIQYIKEQRGEPETFLPLDYLEVKPTDEKLRELKGAKLVIDVIRY
EPPHIKKALQYACGNALVCDNVEDARRIAFGGHQRHKTVALDGTLFQKSGVISGGASDLK
AKARRWDEKAVDKLKEKKERLTEELKEQMKAKRKEAELRQVQSQAHGLQMRLKYSQSDLE
QTKTRHLALNLQEKSKLESELANFGPRINDIKRIIQSREREMKDLKEKMNQVEDEVFEEF
CREIGVRNIREFEEEKVKRQNEIAKKRLEFENQKTRLGIQLDFEKNQLKEDQDKVHMWEQ
TVKKDENEIEKLKKEEQRHMKIIDETMAQLQDLKNQHLAKKSEVNDKNHEMEEIRKKLGG
ANKEMTHLQKEVTAIETKLEQKRSDRHNLLQACKMQDIKLPLSKGTMDDISQEEGSSQGE
DSVSGSQRTSSIYAREALIEIDYGDLCEDLKDAQAEEEIKQEMNTLQQKLNEQQSVLQRI
AAPNMKAMEKLESVRDKFQETSDEFEAARKRAKKAKQAFEQIKKERFDRFNACFESVATN
IDEIYKALSRNSSAQAFLGPENPEEPYLDGINYNCVAPGKRFRPMDNLSGGEKTVAALAL
LFAIHSYKPAPFFVLDEIDAALDNTNIGKVANYIKEQSTCNFQAIVISLKEEFYTKAESL
IGVYPEQGDCVISKVLTFDLTKYPDANPNPNEQ
NT seq
3702 nt
NT seq
+upstream
nt +downstream
nt
atggggttcctgaaactgatcgagatcgagaactttaagtcttacaagggtcgacagatt
atcggaccgtttcagaggttcaccgccatcattggacccaatggctctggtaagtcaaat
ctcatggatgccatcagttttgtattgggtgaaaaaaccagcaacttgcgggtgaagact
ctgagggacctaatccacggagctcctgtgggcaagccagcagccaaccgggcctttgtc
agcatggtctactctgaagagggtgccgaggatcgcacctttgctcgtgtcattgttggg
ggttcctctgagtataagatcaacaacaaagtggtccagctacatgagtacagtgaggaa
ttagagaaattgggcattctcatcaaggctcgtaacttcctcgtcttccagggtgctgta
gagtctattgccatgaagaaccccaaagagagaacagctctgtttgaagaaatcagtcgc
tctggggagctggcccaggagtatgacaaacgaaaaaaagaaatggtgaaggctgaagag
gacacacaatttaattaccatcgcaaaaaaaacattgcggctgaacgcaaggaggccaaa
caggagaaggaagaggctgaccgctaccagcgcctaaaggatgaggtagttcgagctcag
gtacagctgcagctttttaagctttaccataatgaagtggaaattgagaaactcaataag
gaattggcctctaagaacaaggaaattgagaaggacaagaagcgtatggacaaggtagag
gatgagctaaaggagaagaagaaggagctgggcaaaatgatgcgggagcagcagcagatt
gaaaaggagatcaaggagaaggactcagaactgaaccagaagcggcctcagtacatcaaa
gctaaggaaaatacctcccacaaaatcaagaagttagaagcagccaagaagtccctacag
aatgctcagaagcattttaagaaacgtaaaggtgacatggatgagttggaaaaggagatg
ctctccgtagaaaaagcccggcaagaatttgaggaacggatggaagaggagagccagagt
cagggtagagacttaaccttggaggagaatcaggtaaagaaataccatcggttgaaagaa
gaggccagcaagagagcagccaccctggctcaggagctggagaagttcaatcgagaccag
aaagcagaccaggaccggctagatctggaagagaggaagaaagtagagacagaggctaag
atcaagcaaaaactgcgggagattgaagagaaccagaagcgaattgagaaactggaggaa
tacatcacgactagcaaacagtccctggaggagcagaagaaacttgagggggaactgaca
gaggaggtggagatggccaagcggcgtattgatgagatcaataaggagctgaaccaggtg
atggagcagctgggggatgcccgcattgaccgccaggagagcagccgccagcagcgaaag
gcagagattatggaaagcattaagcgcctttatcctggttctgtgtatgggcgcctcatt
gacctctgccagcccacacaaaagaagtatcagattgctgtaaccaaggttctgggcaag
aacatggatgccattattgtggattcagagaagacaggccgggactgtattcagtatatc
aaggaacagcgtggggagcctgagaccttcttgcctcttgactatctggaggtgaaacct
acagatgagaaactccgagagctgaagggggccaagctggtgattgatgtgattcgctat
gagccacctcatattaaaaaggccctgcaatatgcttgtggaaatgcccttgtctgtgat
aatgtagaggatgcccgccgcattgcttttggaggacaccagcgtcataagacagtggca
ctagatggcacactgttccagaaatctggagtcatctctggtggggccagtgatctaaag
gccaaggcaaggcgttgggatgagaaagctgtagacaagttgaaagagaagaaggagaga
ttgacggaggagctaaaagagcaaatgaaggcaaagcgaaaagaagcagaactacgtcaa
gtgcagtctcaggcccatggactgcagatgcggctcaagtactcacagagtgacctggaa
cagaccaagacacggcatctagccctcaatctgcaggaaaaatccaagctggagagtgaa
ttagccaactttgggcctcgcatcaatgatatcaagaggattatccagagccgagagagg
gaaatgaaagatttgaaggaaaagatgaatcaggtagaagatgaagttttcgaagagttt
tgccgggagataggtgtacgcaacatccgagagtttgaggaagagaaggtgaagcgacag
aatgaaattgccaagaagcgtttggagtttgaaaatcagaaaacgcgcttgggcatccag
ttggattttgaaaagaaccagttgaaagaagatcaggataaagtacacatgtgggagcag
acagtgaaaaaagatgaaaatgagatagaaaaactcaagaaggaggagcaaaggcacatg
aagatcatagatgagaccatggcccagctacaagacctgaagaatcagcacctggccaag
aagtcagaggtgaatgacaagaatcacgaaatggaggagattcgtaagaaactggggggc
gccaacaaggaaatgacccatttacagaaggaggtgacagctattgagaccaagcttgaa
cagaagcgtagtgaccgccacaacctgctgcaggcctgtaagatgcaagatattaagctg
ccactgtctaagggcaccatggatgatattagtcaggaggagggtagttcccagggagaa
gattcagtgagtggttcccagcgaacatcaagtatctatgcacgagaggctctcattgag
atcgactatggcgacctgtgtgaggatctgaaggatgctcaggctgaggaggagatcaaa
caggagatgaatacactgcagcaaaaactaaatgagcagcagagtgtactccagcgcatt
gctgctcccaatatgaaggccatggaaaagctggaaagtgtccgagacaagttccaggag
acctcagatgaatttgaggctgctcgtaagcgagccaagaaggccaagcaggcatttgaa
cagatcaagaaggagcgttttgatcgcttcaatgcttgttttgaatctgtggctaccaac
attgatgagatctacaaggccctctcccgcaacagcagtgcccaggcatttttgggccct
gagaaccctgaggagccctacttagatggcatcaactacaactgtgtggctcctggcaaa
cgcttccggccaatggataacttgtcagggggggagaaaacagtggcagctctggcccta
ctgtttgctatccacagctacaagccagctcccttcttcgtcctggatgagatcgatgct
gccctggataacaccaacattggcaaggtggcaaattacatcaaggagcagtcaacttgc
aacttccaggccatagtcatctctctcaaggaggagttctacaccaaggctgagagcctc
attggagtctaccctgagcaaggggactgtgtgatcagcaaagtcctgaccttcgacctc
accaagtaccctgatgccaaccctaaccccaatgagcagtag
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