Sorex araneus (European shrew): 101554572
Help
Entry
101554572 CDS
T07854
Symbol
VPS18
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
sara
Sorex araneus (European shrew)
Pathway
sara04140
Autophagy - animal
sara04148
Efferocytosis
sara05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
sara00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
101554572 (VPS18)
04148 Efferocytosis
101554572 (VPS18)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
101554572 (VPS18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sara04131
]
101554572 (VPS18)
Membrane trafficking [BR:
sara04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
101554572 (VPS18)
Hops complex
101554572 (VPS18)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pep3_Vps18
VPS18_RING_C
Clathrin
zf-RING_5
zf-C3HC4_2
zf-RING_16
zf-RING_Vps41
zf-RING_2
zf-ANAPC11
KNOX2
zf-RING_UBOX
zf_RING_Vps8
zf-rbx1
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
101554572
NCBI-ProteinID:
XP_004609637
LinkDB
All DBs
Position
Unknown
AA seq
973 aa
AA seq
DB search
MASILDEYEDSLSRSAVLQPGCPSVGIPHSGYVNAQLEKEVPIFTKQRIDFTPSEKITSL
VVSCNQLCMSLGKDTLLRIDLGKANEPNHMELGRKDDARVHKMFLDHTGSHLLIALSSTE
VLYVNRNGQKVRPLARWKGQLVESVGWNKSLGTESSTGPILVGTAQGQIFEAELSASEGG
LFGPAPDLYFRPLYVLNEEGGPAPVCSLEAERGPDRRTFVLATTRQRLFQFIGRTAEGAD
AQGFSGLFAAYADHPPPFREFPSSLGYSELAFYTPKLRSSPRAFAWMMGDGVLYGALDYG
RPDSLLSEERVWEYPEGVGPRASPPLAIVLTQFHFLLLLADRVEAVCTLTGQVVLRDHFL
EKFGPLRHMVKDTSTGHLWAHTERAVFRYHVQREARDVWRTYLDMNRFDLAKEYCRERPD
CLDTVLAREADFCFRQRRYVESARCYALTQSYFEEIALKFLEARQEEALAEFLQQKLAGL
KPAERTQATLLTTWLTELYLSRLGALQGDPEALTLYLETRERFRAFLSSPRHKDWLFASR
ASIHELLASHGDTEHMVYFAVIMQDYERVVAYHCQHEAYEEALAVLARHRDPQLFYKFSP
VLIRHIPRQLVDAWIEMGGRLDARQLIPALVNYSQGGEAQQVSQAIRYMEFCVKELGETE
QAIHNYLLSLYARGQPASLLSYLENAGASPHRVHYDLKYALRLCAEHGHHRACVHVYKVL
ELYEEAVDLALQVDVDLAKQCADLPEEDEELRKKLWLKIARHVVQEEEDVQTAMACLASC
PLLKIEDVLPFFPDFVTIDHFKEAICSSLKAYNQHIQELQQEMEEATASAQRIRRDLQEL
RGRYGTVEPQDKCAACDFPLLNRPFYLFLCGHMFHADCLLQAVRPGLPAYKQARLEELQR
KLGAAPPPSKSLARAKEAEGAAAPAGPSREQLKADLDELVAAECVYCGELMIRSIDRPFI
DPQRYEEEHLSWL
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccatcctggatgaatacgaggactccctgtcccgctcggcggtcttgcaacct
ggctgccccagcgtgggcatccctcactcggggtatgtgaatgcccaactcgagaaggaa
gtgcccatcttcacaaaacagcgcattgactttactccttccgagaaaatcactagtctg
gtcgtctcctgcaatcaactgtgcatgagcctgggcaaggacacgctgctccgcattgac
ttgggcaaggccaatgagcccaaccacatggagctgggacgcaaggatgatgccagagtt
cataagatgttcctggaccacacaggctcccatctgctgatcgccctgagcagcactgag
gtcctctacgtgaaccggaatgggcagaaggtgcggcccctggcccgctggaaagggcag
ctggtggagagtgtgggctggaacaagtccctgggcaccgagagcagcaccggccccatc
ctggtgggcaccgctcagggccagatctttgaagccgagctctcagccagcgaggggggg
ctcttcggccctgcccctgacctctacttccgtccactgtacgtgctcaacgaagaaggg
gggccggcccccgtgtgctccctggaggcggagcggggccccgaccgccgcacctttgtc
ctggccaccactcgccagcgcctcttccagttcatcgggcggacggcagagggcgctgat
gcccagggcttctcggggctcttcgccgcctacgccgaccaccccccgcccttccgcgag
ttccccagcagcctgggttacagcgagctggccttctacacccccaagctgcgctcgtcg
ccccgggccttcgcctggatgatgggggacggcgtgctgtacggcgccctggactacggg
cgccccgactcgctgctgagcgaggagcgggtctgggagtaccccgagggcgtgggcccc
cgggccagccccccgctggccatcgtcctgacccagttccacttcctgctgctgctggcc
gaccgcgtggaggccgtgtgcacgctgaccgggcaggtggtgctgcgcgaccacttcctg
gagaagttcgggccgctgcggcacatggtgaaggacacatccaccggccacctgtgggcg
cacacggagcgcgccgtcttccgctaccacgtgcagcgggaggcgcgcgacgtgtggcgc
acctacctggacatgaaccgcttcgacctggccaaggagtactgccgcgagcggcccgac
tgcctggacaccgtgctggcccgcgaggccgacttctgcttccgccagcggcgctacgtg
gagagcgcccgctgctacgcgctcacgcagagctacttcgaggagatcgccctcaagttc
ctggaggcccggcaggaggaggccctggctgagttcctgcagcagaagctggccggcctg
aagcccgcggagcgcacgcaggccacactgctcaccacctggctgaccgagctctacctg
agccggctcggggccctgcagggggaccccgaggccctgaccctctacctggaaacccgg
gagcgcttccgagccttcctcagcagcccccgccacaaggactggctcttcgccagccgc
gcctccatccacgagctgctggccagccacggggacacggaacacatggtgtacttcgct
gtgatcatgcaggactacgaacgggtggtggcctaccactgccagcacgaggcctatgag
gaggccctggcggtgctggcccgccaccgcgacccgcagctcttctacaagttctctccc
gtcctcatccgccacatcccccgccagctggtggacgcctggatcgagatgggcggccgg
ctggacgcccggcagctcatccccgccctggtgaactacagccaggggggcgaggcccag
caggtgagccaggccatccgctacatggagttctgcgtgaaggagctgggtgagacggag
caggccatccacaactacctgctgtcgctgtatgcccggggccagcctgcctcgctgctc
tcctacctggagaatgccggggccagcccacatcgcgtgcactacgacctcaagtatgcc
ctgcggctctgtgccgagcatggccaccaccgtgcctgcgtccacgtctataaggtcctg
gagctctacgaggaggctgtggacctggccctgcaggtggacgtggacttggccaagcag
tgtgcagacttgcccgaggaggatgaggagctgcggaagaagctttggctgaagattgca
cgccacgtggttcaggaagaggaggacgtgcagacagccatggcctgcctggccagctgc
cccctgctcaagatagaggacgtcctgcccttcttccctgacttcgtcaccatcgaccac
ttcaaggaggccatctgcagctccctgaaggcctacaaccagcacatccaggagctgcag
caggagatggaggaggccacggccagcgcccagcgcatccggcgcgacctgcaggagctg
cggggccgctacggcaccgtggagcctcaggacaagtgcgccgcctgcgacttccccctg
ctcaaccgccccttctacctcttcctctgcggccacatgtttcacgccgactgcctgctg
caggctgtgcggcccggcctgccagcctacaagcaggcccggctggaggagctgcagcgg
aagctgggggccgccccaccaccctccaagagcttggcccgggccaaggaggctgagggt
gcagccgcccccgcagggcccagccgggaacagctcaaggctgacctggacgaactggtg
gctgctgagtgcgtgtactgtggggagctgatgatccgctccattgaccggcccttcatt
gatccgcagcggtacgaggaggagcacctcagctggttgtga
DBGET
integrated database retrieval system
