Sorex araneus (European shrew): 101555041
Help
Entry
101555041 CDS
T07854
Symbol
RABGEF1
Name
(RefSeq) rab5 GDP/GTP exchange factor isoform X2
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
sara
Sorex araneus (European shrew)
Pathway
sara04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
sara00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
101555041 (RABGEF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sara04131
]
101555041 (RABGEF1)
Membrane trafficking [BR:
sara04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
101555041 (RABGEF1)
Protein recycling
Other Rab GTPase associated proteins
101555041 (RABGEF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS9
DUF5601
zf-A20
SSTK-IP
Motif
Other DBs
NCBI-GeneID:
101555041
NCBI-ProteinID:
XP_004615976
LinkDB
All DBs
Position
Unknown
AA seq
491 aa
AA seq
DB search
MSLKSERRGIHVDQSELLCKKGCGYYGNPAWQGFCSKCWREEYHKARQKQIQEDWELAER
LQREEEEAFASSQSSQGAQSLTFSKFEEKKTNEKTRKVTTVKKFFSASSRVGSKKEIQEA
KAPSPSINRQTSIETDRVSKEFIEFLKTLHKTGQEIYKQTKVFLETMHYKRELSIEEQSE
CTQDFYQNVAERMQTRGKVPPEKVEKIMDQIEKYIMTRLYKYVFCPETTDDEKKDLAIQK
RIRALHWVTPQMLCVPVNEEIPEVSDMVVKAITDIIEMDSKRVPRDKLACITKCSKHIFN
AIKITKNEPASADDFLPTLIYIVLKGNPPRLQSNIQYITRFCNPSRLMTGEDGYYFTNLC
CAVAFIEKLDAQSLNLSQEDFDRYMSGQTSPKKQESENWSPDACLGVKQMYKNLDLLSQL
NERQERIMNEAKKLEKDLIDWTDGIAKEVQDIVEKYPLEIKPPNQSLAAIDSENVENDKL
PPPLQPQVYAG
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgagccttaagtcggaacgccgaggaattcatgtggatcagtcggaactcctatgcaag
aaaggatgtggttactatggcaaccctgcttggcagggtttctgttctaaatgctggagg
gaggaataccacaaagccaggcagaagcagattcaggaggattgggaactcgcagagaga
cttcaacgagaggaggaggaagcctttgccagcagtcagagtagccaaggagcccaatcc
ctcacgttttccaagtttgaggaaaagaaaaccaatgagaagacacgcaaagttaccaca
gtgaagaaattcttcagtgcttcctccagggttggatcaaaaaaagaaattcaagaagca
aaagctcccagcccttctataaaccggcaaaccagcattgaaacggatagagtgtccaaa
gagtttatagaatttctcaagaccctccataagactggccaagaaatctataagcaaacc
aaggtgtttttagaaacaatgcattacaaaagggaattaagtattgaggaacagtcagaa
tgtacgcaggatttttatcagaatgtggctgagagaatgcagactcgtggaaaagtgcct
ccagaaaaagttgagaagataatggatcagattgaaaagtacatcatgactcgtctctat
aaatatgtattctgtccagaaactactgatgatgaaaagaaagatcttgctattcaaaag
aggatcagagcactacactgggttacacctcagatgctttgtgtccctgttaatgaagaa
atccctgaagtgtctgatatggtagtgaaggcaattacagatatcattgaaatggattca
aaacgtgtgcctagagataagttggcatgcatcacgaaatgcagcaagcacatcttcaat
gccatcaagatcaccaagaatgaaccagcttcagctgatgacttcttgcctactcttatc
tacattgttttgaagggcaaccccccacggcttcagtccaatatccagtatatcacccgc
ttctgcaacccaagccgattgatgactggagaagatggctactatttcaccaatctgtgt
tgcgctgtggctttcattgagaaattagatgctcagtctttaaatttaagtcaggaagac
tttgatcgctacatgtctggccagacttctccaaagaagcaagagtctgagaattggtct
ccagatgcttgcttaggtgttaaacaaatgtataagaacttggatcttctttctcagttg
aatgagcgacaggagaggatcatgaatgaagccaagaaacttgaaaaagacctaatagat
tggacagatggaattgcaaaagaggttcaagacattgttgagaaatatccacttgaaatt
aagcccccaaatcaatctttagcagcaattgactctgaaaatgttgaaaatgataaactt
cctccaccacttcaacctcaagtttatgcaggatga
DBGET
integrated database retrieval system
