Sorex araneus (European shrew): 101555106
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Entry
101555106 CDS
T07854
Symbol
NDC1
Name
(RefSeq) nucleoporin NDC1
KO
K14315
nucleoporin NDC1
Organism
sara
Sorex araneus (European shrew)
Pathway
sara03013
Nucleocytoplasmic transport
sara05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
sara00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
101555106 (NDC1)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
101555106 (NDC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sara03019
]
101555106 (NDC1)
Messenger RNA biogenesis [BR:
sara03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
101555106 (NDC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ndc1_Nup
GP41
Motif
Other DBs
NCBI-GeneID:
101555106
NCBI-ProteinID:
XP_004607379
LinkDB
All DBs
Position
Unknown
AA seq
683 aa
AA seq
DB search
MQRRLRCLAVRWTLLRRGLLEERLAVLTSQVLGWRVVSSIVWSVLLLPVSTVLYVVLSSI
DLWHPIQWLSDSFSDLYSSYVIFYLLLLSVVVVVISIFNVEFYTVAPCIPCTRLALMGKI
IHPQQLLHSFVHGSMGMMMAWCAAVMARSRYSFLVVPCPGTESPDAPNCLNENHLFFLLA
GAFIGYSYSLLYFINNMNYLPFPIVQQYKFLRFRRSLPVLVKHSCMESLFLIRNFCVIYY
FLGHMPKTWISTAMDLQIDERFHRPLDTLSGLLDLSLLYHVWLCGVFILMTWHTSWLLFK
IFATEAHQFPVRSPFAGESDDCLGEVLNSSPPLILKYLALQDLMLLSQYSPSRRQEVFSL
SQPGGHPHNWTAISRECLNLLNDMTQKLVLYQEAAATNGRVMLTSYSAEPKRSDSAEETA
FQTPKGDHVPRSSVPSLVKTPLFSSKLSTPETMSPLGAPFGFGVVNRMAGIFDADTCYAS
PQSPQLTRRGPRLWTSASDQQMNEFSNHSPSAAVRAERKTVSRPSATHLWIESKREQIKN
FLSRRVLIMYFFSKHPEASIQAVFADAQMHIWALEGLSHLVAASFTEDRFGVVQTTLPAI
LNTLLTLQEAVDKYFKLPHASSKPPRTSESLVDTSYKTLRFAFRASLKTAIYRITTTFGD
HLNAVQASAEHQKRLQQFLEFKE
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgtcgcctccggtgcctggcggtccgctggaccctgctccggaggggcctcttg
gaggagcggctggcggtgctcacgtcgcaggtcttgggctggagggtcgtctcaagtatt
gtctggtcagtgctgctactgcccgtctccaccgtcttatacgtagtactcagcagcatt
gatttatggcacccgatacagtggctgtcagattctttcagtgacctttatagctcctat
gtaatcttttacctcttgctgctgtcggtggtagtagtagtgataagtattttcaatgtg
gagttctatacagttgcgccttgcattccctgcacccggctggccctgatggggaagatc
atccacccccagcagctcctgcactccttcgtgcacggctccatgggcatgatgatggcc
tggtgtgccgcggtgatggcccgcagccgctacagtttccttgtggtcccctgccccgga
actgagagccctgatgccccaaactgcttaaacgagaaccaccttttcttcctgctggct
ggcgcctttataggctacagctacagcctcctgtacttcatcaacaacatgaactacctt
ccgtttcccatcgtacagcaatacaagttcttacgcttcaggagatctctgcctgtgctc
gttaaacatagctgtatggaatcgctgttcctgattagaaatttctgtgttatatattat
ttccttggccatatgcctaaaacttggattagcaccgccatggaccttcagatagatgag
cggttccacaggcctctggacacgctgagcggcctcctggacctctcgctgctctaccat
gtctggctgtgcggcgtcttcatcctgatgacctggcacacctcgtggctgctcttcaag
atctttgccacagaggctcatcagttccccgtgcggtcgcccttcgcaggagagtcggac
gactgtctcggggaggttctgaacagcagccccccgctcatcctaaagtatttggccttg
caggacctcatgttactttctcaatattctccttcacgaagacaagaagtttttagcctt
agccaaccaggtggacatccccacaactggacagctatttcaagggagtgtttaaatctt
ctgaatgatatgactcagaaactggttctctaccaagaagccgctgctactaacgggaga
gtgatgttgacgtcttactcggcagaacctaagagatccgattctgcagaagaaactgct
tttcagacccccaagggggaccatgtacctcggtcttctgtgccgtccttggtgaagacg
cccctgttttcctcaaagttatctacaccggagaccatgagtcccctgggagcccctttt
ggctttggcgtggtgaatcgcatggctgggatcttcgatgccgacacctgctatgcgtcg
ccccagagcccgcagctgacgaggagagggccacgcttgtggacttcggcttctgatcag
caaatgaatgaattttctaatcattccccgtcagccgcggttagggccgagcggaagacc
gtgagccggcccagcgcgactcacttatggatcgagagcaaacgtgagcagatcaagaat
ttcttgtcgaggcgggtgctgataatgtattttttcagcaagcacccagaggcctccatt
caggcagttttcgcagatgcccaaatgcatatctgggcattagaaggtctgtctcacttg
gtggcagcgtccttcacagaagatcggttcggagtcgtccagaccacactccctgctatc
ctgaacacgctgttgacactgcaagaggcggttgacaagtacttcaagcttcctcatgct
tccagcaaaccaccgaggacctcagaaagccttgtggacacttcttataaaacgttaaga
ttcgcatttcgggcatcgctgaaaacggccatctatcgcataactactacgtttggagac
catctgaatgccgtgcaagcatctgcagaacatcagaaaagacttcaacagttcttggag
ttcaaagaatag
DBGET
integrated database retrieval system
