Sorex araneus (European shrew): 101555132
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Entry
101555132 CDS
T07854
Symbol
COPB1
Name
(RefSeq) coatomer subunit beta
KO
K17301
coatomer subunit beta
Organism
sara
Sorex araneus (European shrew)
Brite
KEGG Orthology (KO) [BR:
sara00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sara04131
]
101555132 (COPB1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sara04147
]
101555132 (COPB1)
Membrane trafficking [BR:
sara04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
101555132 (COPB1)
Exosome [BR:
sara04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
101555132 (COPB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Adaptin_N
Coatomer_b_Cpla
Coatamer_beta_C
HEAT
HEAT_2
Cnd1
HEAT_EZ
Arm
MMS19_N
AP4E_app_platf
Motif
Other DBs
NCBI-GeneID:
101555132
NCBI-ProteinID:
XP_004613638
LinkDB
All DBs
Position
Unknown
AA seq
953 aa
AA seq
DB search
MTAAENVCYTLINVPMDSEPPSEISLKNDLEKGDVKSKTEALKKVIIMILNGEKLPGLLM
TIIRFVLPLQDHTIKKLLLVFWEIVPKTTPDGRLLHEMILVCDAYRKDLQHPNEFIRGST
LRFLCKLKEAELLEPLMPAIRACLEHRHSYVRRNAVLAIYTIYRNFEHLIPDAPELIHDF
LVNEKDASCKRNAFMMLIHADQDRALDYLSTCIDQVQTFGDILQLVIVELIYKVCHANPS
ERARFIRCIYNLLQSSSPAVKYEAAGTLVTLSSAPTAIKAAAQCYIDLIIKESDNNVKLI
VLDRLIELKEHPAHERVLQDLVMDILRVLSTPDLEVRKKTLQLTLDLVSSRNVEELVIVL
KKEVIKTNNVSEHEDTDKYRQLLVRTLHSCSVRFPDMAANVIPVLMEFLSDSNEAAAADV
LEFVREAIQRFDNLRMLIVEKMLEVFHAIKSVKIYRGALWILGEYCSTKEDIQSVMTEVR
RSLGEIPIVESEIKKEAGELKPEEEITVGPAQKLVTEMGTYATQSALSSSRPTKKEEERP
PLRGFLLDGDFFVAASLATTLTKIALRYVALVQEKKKQNSFVAEAMLLMATILHLGKSSL
PKKPITDDDVDRISLCLKVLSECSPLMNEIFNKECRESLSHMLSAKLEEEKLSQKKESEK
RNVTIQPDDPISFMQLTAKNEMNCKEDQFQLSLLAAMGNTQRKEAADPLASKLNKVTQLT
GFSDPVYAEAYVHVNQYDIVLDVLVVNQTSDTLQNCTLELATLGDLKLVEKPSPLTLAPH
DFANIKANVKVASTENGIIFGNIVYDVSGAASDRNCVVLSDIHIDIMDYIQPATCTDAEF
RQMWAEFEWENKVTVNTNIIDLNDYLQHILKSTNMKCLTPEKALSGYCGFMAANLYARSI
FGEDALANVSIEKPIQQGPEAAVTGHIRIRAKSQGMALSLGDKINLSQKKSSI
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atgacggctgctgagaatgtgtgctatacgttaatcaacgtgccgatggattcggaacca
ccatctgaaattagcttaaaaaatgatctagaaaaaggagatgtgaagtcaaagactgaa
gctttgaaaaaagtaatcatcatgattctgaatggtgaaaaactccctggacttctgatg
actatcattcgatttgtgctacctcttcaggatcataccattaaaaaattacttttggta
ttttgggaaatagttcctaaaacaactcctgatggaagacttttacatgaaatgatcctt
gtatgtgatgcatatagaaaggatcttcaacatcctaatgaattcattcgaggatcaacc
cttcgttttctttgcaaattgaaagaagcagaactgctggaacctttaatgccagctatc
cgtgcttgtttggaacatcgacatagctatgtcagaagaaatgctgttttggccatttat
actatatatagaaattttgaacatcttatacctgatgctcctgaactgatacatgatttt
ctggtgaatgagaaggatgcaagttgcaaaaggaatgcatttatgatgctaattcatgca
gatcaggatcgagctttggattacctaagtacttgtattgatcaagttcagacatttgga
gacattcttcaattggttattgttgaactaatttataaggtctgtcatgctaacccatct
gaaagggctcgtttcattcgctgcatctataacttactacagtcatctagccctgctgtg
aaatatgaagctgctggaacattagtgacactctctagtgctcctactgcaatcaaggct
gctgctcagtgttacattgatttgattattaaggagagtgacaacaatgtaaagctcata
gttctggatcgattgatagaattaaaagaacatcctgctcatgaacgagtactacaggat
ttggtcatggacatcctgagagtcttgagcacaccagacttagaagtacgcaagaaaact
ttgcagttaacactggatcttgtctcttctaggaatgtggaagagctggttattgttctg
aagaaggaagtgattaaaacaaataatgtgtctgagcatgaagatactgataaatacaga
cagcttcttgttcgaacattgcattcctgttctgttcgatttccagatatggctgcaaat
gttattcctgtgttaatggaatttctcagtgacagtaatgaagcagcagctgctgatgtc
ttggagtttgttcgtgaggccattcaacgctttgataacctaagaatgcttattgttgag
aagatgcttgaagtctttcatgctattaaatctgtcaagatttaccgaggagcattatgg
atcttgggagaatattgtagtaccaaggaagatattcaaagtgtaatgacagaggttcgc
aggtcccttggagagatcccaattgtagagtctgaaataaagaaagaagctggtgaatta
aaacctgaggaagaaataactgtggggccagctcagaaattggttactgaaatgggcacc
tatgctactcagagtgcgctgagcagttccagacccaccaagaaagaggaagaaagacct
cccctgagaggatttcttctggatggagatttctttgttgctgcgtcccttgccacaact
ctgaccaagattgctttgcgctatgtagctctggttcaggagaagaaaaagcaaaattct
ttcgttgctgaagctatgttgctcatggccacaattcttcatttgggaaagtcctctctt
cctaagaagcctattacagatgatgatgtagatcgaatttccctctgtctcaaggtcttg
tctgaatgttcacctctaatgaatgagattttcaataaggaatgcagagagtctctttct
catatgttatctgctaaacttgaagaagagaaattatctcaaaagaaagaatctgaaaag
agaaatgtgacaatacagcctgatgatcccatttccttcatgcaactaactgctaagaat
gaaatgaactgcaaggaagaccaatttcagctgagtttgctggcagcaatgggcaacaca
cagaggaaagaggcagcagatcccctagcctctaaactaaacaaggtcactcagttgaca
ggtttctcagatcctgtatatgcagaagcttatgttcatgtcaatcagtacgatattgtc
cttgatgtacttgttgtgaaccaaaccagtgatactctgcagaactgcacattagagtta
gcaactctaggggatctgaaacttgtggaaaaaccatctcctttgactcttgcacctcat
gattttgcaaatattaaagctaatgtcaaagtagcatcgacagaaaatggaataattttt
ggtaatatagtgtatgatgtctctggcgcagcaagtgacagaaattgtgtggtcctcagt
gatattcacattgacatcatggactacatccagcctgcgacttgcactgatgctgaattc
cgtcagatgtgggctgaatttgaatgggaaaacaaagtgacagttaatacaaatatcatt
gatttaaatgactatttacaacacatattaaagtcaacaaacatgaagtgccttactcca
gagaaggcactctctggttactgtggctttatggcagccaacctctatgctcgttccata
tttggagaggatgcacttgcaaatgtcagcattgagaaaccaatccagcagggaccagaa
gctgctgtcacaggccacataagaattcgtgcaaagagtcagggaatggccttaagtctt
ggagacaaaataaacttgtctcagaagaaaagcagtatataa
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