Sorex araneus (European shrew): 101555133
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Entry
101555133 CDS
T07854
Symbol
RFWD2
Name
(RefSeq) E3 ubiquitin-protein ligase RFWD2
KO
K10143
E3 ubiquitin-protein ligase RFWD2 [EC:
2.3.2.27
]
Organism
sara
Sorex araneus (European shrew)
Pathway
sara04115
p53 signaling pathway
sara04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
sara00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
101555133 (RFWD2)
09140 Cellular Processes
09143 Cell growth and death
04115 p53 signaling pathway
101555133 (RFWD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sara04121
]
101555133 (RFWD2)
Enzymes [BR:
sara01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101555133 (RFWD2)
Ubiquitin system [BR:
sara04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
101555133 (RFWD2)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
101555133 (RFWD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_EIPR1
WDR55
Beta-prop_RIG_2nd
EIF3I
zf-C3HC4_2
Beta-prop_WDR19_1st
Beta-prop_TEP1_C
Beta-prop_CAF1B_HIR1
Beta-prop_EML
zf-C3HC4
Beta-prop_DCAF4
Beta-prop_WDR90_POC16_2nd
zf-RING_2
zf-RING_5
WD40_RFWD3
zf-RING_UBOX
Beta-prop_WDR35_TULP_N
Beta-prop_Vps41
zf-rbx1
zf-C3HC4_3
WD40_like
Beta-prop_IFT140_1st
Beta-prop_DCAF12
zf-C3HC4_4
Beta-prop_IFT122_1st
zf-RING_4
WDR90_beta-prop_4th
CENP-Q
zf_C2H2_10
RING_XB3-XBAT31
zf-RING_10
Prok-RING_4
TRAF3_RING
DZR
UvrD-helicase
AAA_23
Motif
Other DBs
NCBI-GeneID:
101555133
NCBI-ProteinID:
XP_012789327
LinkDB
All DBs
Position
Unknown
AA seq
567 aa
AA seq
DB search
MIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNIDHLYPNFLVNELILKQKQRFE
EKRFKLDHSVSSTNGHRWQIFQDLLGTDQDNLDLANVNLMLELLVQKKKQLEAQLEQIQK
ELSVLEEDIKRVEEMSGLYSSVSEDSTVPQFEAPSPSHSSIIDSTEYSQPPGFSGSSQTK
KQPWYNSTLASRRKRLTAHFEDLEQCYFSTRMSRISDDSRTASQLDEFQECLSKFTRYNS
VRPLATLSYASDLYNGSSIVSSIEFDRDCDYFAIAGVTKKIKVYEYGTVIQDAVDIHYPE
NEMTCNSKISCISWSSYHKNLLASSDYEGTVILWDGFTGQRSKVYQEHEKRCWSVDFNLM
DPKLLASGSDDAKVKLWSTNLDNSVASIEAKANVCCVKFSPSSRYHLAFGCADHCVHYYD
LRNTKQPIMVFKGHRKAVSYAKFVSGEEIVSASTDSQLKLWNVGKPYCLRSFKGHINEKN
FVGLASNGDYIACGSENNSLYLYYKGLSKTLLTFKFDTVKSVLDKDRKEDDTNEFVSAVC
WRALPDGESSVLIAANSQGTIKVLELV
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atgattgaggaagcatacatgacgaaatgtggccacagcttttgctacaagtgcattcat
cagagtttggaggataataatagatgtcccaaatgtaactacgtcgtggataatattgac
catctgtatcctaatttcctggtcaacgagcttatactcaagcagaagcagaggtttgag
gaaaagaggttcaagttggatcactcagtgagtagcaccaatggccacaggtggcaaata
tttcaggatttactggggactgaccaagataatcttgacttggccaacgtcaacctcatg
ttggagttgctagtgcagaaaaagaagcaactggaagcacagctggagcagattcagaag
gagctcagtgttctagaagaggatattaaaagagtggaagaaatgagcggcttatactct
tcggtcagtgaggatagcacagtgcctcagtttgaagctccttctccgtcccacagtagt
atcattgattccaccgagtacagccagccgccgggtttcagtggcagttctcagaccaag
aagcagccctggtacaacagcaccttagcttccagacgaaaacgactcacggctcatttt
gaagacctagagcagtgttacttttctacgaggatgtcccgtatctcagacgacagccga
actgcgagccagctggatgaatttcaggaatgcctgtccaagtttaccagatataactca
gtccgacccctggcaacactgtcgtacgctagtgatctctacaatggctccagtatagtc
tccagtattgaatttgaccgggattgtgactattttgcaattgctggtgttaccaagaaa
attaaagtctatgaatacggcaccgtcatccaggatgcagtggatattcattaccctgaa
aatgaaatgacctgcaattccaaaatcagctgtatcagttggagtagttatcacaagaac
ctgctagccagcagtgattacgaaggcaccgtcatcctgtgggatggattcaccgggcag
aggtcaaaggtctatcaggagcacgagaagaggtgttggagtgttgattttaacttgatg
gatcccaaactcttggcttcaggttctgatgatgcaaaagtcaaattgtggtccaccaac
ctcgacaactcggtggccagcattgaggcgaaggctaatgtgtgctgtgtgaaattcagc
ccctcttccagatatcatttagctttcggctgtgcagatcactgcgtccactactatgat
ctccggaacactaagcagccgatcatggtgttcaaggggcaccggaaagccgtctcctac
gccaagtttgtgagcggcgaggagatcgtctccgcctcgacggacagccagctcaaactg
tggaacgtggggaagccatactgtctgcgctccttcaagggccacatcaacgagaagaac
tttgtcggcctggcttccaacggggattacatagcgtgcggaagcgagaacaactctctt
tacctgtattacaaaggactttctaagactttgttaactttcaagtttgacacggtcaag
agcgttctggacaaagaccgaaaagaggacgacacgaatgagtttgtcagtgccgtgtgc
tggagggcgctgccggacggggagtccagtgtgctgatcgctgctaacagtcagggcaca
atcaaggtgctggagttggtgtga
DBGET
integrated database retrieval system
