Sorex araneus (European shrew): 101555184
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Entry
101555184 CDS
T07854
Symbol
TRIM71
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM71
KO
K12035
tripartite motif-containing protein 71 [EC:
2.3.2.27
]
Organism
sara
Sorex araneus (European shrew)
Pathway
sara05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
sara00001
]
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
101555184 (TRIM71)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sara03019
]
101555184 (TRIM71)
04121 Ubiquitin system [BR:
sara04121
]
101555184 (TRIM71)
Enzymes [BR:
sara01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101555184 (TRIM71)
Messenger RNA biogenesis [BR:
sara03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
101555184 (TRIM71)
Ubiquitin system [BR:
sara04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
101555184 (TRIM71)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NHL
Filamin
DUF5128
SGL
DUF5711
Vgb_lyase
COG5_N
Motif
Other DBs
NCBI-GeneID:
101555184
NCBI-ProteinID:
XP_004603910
LinkDB
All DBs
Position
Unknown
AA seq
566 aa
AA seq
DB search
MGRHGGHSFIYLQEALQDSRALTIQLLADAQQGRQALQLSIEQAQTVAEQVEMKAKVVQS
EVKAVTARHKKALEERECELLWKVEKIRQVKAKSLYLQVEKLRQSLNKLESTISAVQQVL
EEGRALDVLLARDRMLAQVQELKSVRSFLQPQEDDRVMFTPPDQTLYLAIKSFGFVSSGA
FAPLTKATGEGLKRALQGKVASFTVIGYDHDGEPRLSGGDLMSAVVLGPDGNLFGAEVSD
QQNGTYLVSYRPQLEGEHLVSVTLCNQHIENSPFKVLVKSGRSYVGIGLPGLSFASEGDT
DGKLCRPWGVSVDKEGYIVVADRSNNRIQVFKPCGAFHHKFGTLGSRPGQFDRPAGVACD
ASRRIVVADKDNHRIQIFTFEGQFLLKFGEKGTKNGQFNYPWDVAVNSEGKILVSDTRNH
RIQLFGPDGVFLNKYGFEGALWKHFDSPRGVTFNHEGHLVVTDFNNHRLLVIHPDCQSAR
FLGSEGTGNGQFLRPQGVAVDQEGRIIVADSRNHRVQMFESNGSFLCKFGAQGSGFGQMD
RPSGIAITPDGMIVVVDFGNNRILVF
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atgggccgccacggaggccacagtttcatctacctccaggaggcgctgcaggactcacgg
gctctcaccatccagctgctggctgacgcccagcagggccgccaggcactccagctgagc
atcgagcaggcccagacggtcgcggagcaggtggagatgaaggccaaggtggtccagtcg
gaggtgaaagcggtgacggcgcgtcacaagaaagctctggaggagcgcgagtgtgagctg
ctgtggaaggtggagaagatccgccaggtgaaagccaagtccctgtacctgcaggtggag
aagctgcgccagagcctcaacaagctggagagcaccatcagcgcggtgcagcaggtgctg
gaggagggccgggccctggacgtgctgctggcccgggaccgcatgctggcgcaggtgcag
gagctgaagagcgtgcgtagcttcctgcagccccaggaggacgaccgggtcatgttcacc
cccccggaccagaccctctacctggccatcaagtccttcggcttcgtcagcagcggggcc
ttcgcgcccctcaccaaggccacgggcgagggcctcaagcgggccctgcagggcaaggtg
gcctccttcaccgtcatcggctatgaccacgacggggagccccggctgtccggcggcgac
ctgatgtccgccgtggtcctgggccccgacggcaacctgttcggggcggaggtgagcgac
cagcagaacggcacctacctggtgagctaccggccgcagctggagggcgagcacctggtg
tccgtcaccctgtgcaaccagcacatcgagaacagccccttcaaggtgctggtcaagtcg
ggccgcagctacgtgggcatcgggctcccgggcctgagcttcgccagcgagggcgacacc
gacgggaagctgtgccgcccctggggcgtgagcgtggacaaggagggctacatcgtcgtg
gccgaccgcagcaacaaccgcatccaggtcttcaagccctgcggcgccttccaccacaag
ttcggcaccctgggctcccggcccggccagttcgaccggcccgccggcgtggcctgcgac
gcctcccgccgcatcgtggtggcggacaaggacaatcatcgcatccagatcttcaccttc
gagggccagttcctcctcaagttcggggagaagggcaccaagaacgggcagttcaactac
ccttgggatgtcgccgtgaattccgaaggcaagatcctggtctccgacacgcgaaaccac
cgcatccagctgtttggccccgacggagtcttcctcaacaagtacggctttgagggggcg
ctctggaagcactttgactccccccggggcgtgaccttcaaccacgagggccacctggtg
gtcaccgacttcaacaaccaccggctgctggtcatccaccccgactgccagtcggcgcgc
ttcctgggctccgagggcactggcaatggtcagttcctgcgaccccagggtgtggccgtg
gaccaggaggggcgcatcatcgtggccgattcccggaaccaccgggtgcagatgtttgag
tccaatggcagcttcctgtgcaagtttggggctcaaggcagtggctttggccaaatggac
cgtccttccggcatcgccatcacccctgacgggatgatcgtcgtggtggactttggcaac
aatcgaatccttgtcttctaa
DBGET
integrated database retrieval system
