Sorex araneus (European shrew): 101555310
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Entry
101555310 CDS
T07854
Symbol
VCL
Name
(RefSeq) LOW QUALITY PROTEIN: vinculin
KO
K05700
vinculin
Organism
sara
Sorex araneus (European shrew)
Pathway
sara04510
Focal adhesion
sara04520
Adherens junction
sara04670
Leukocyte transendothelial migration
sara04810
Regulation of actin cytoskeleton
sara04820
Cytoskeleton in muscle cells
sara05100
Bacterial invasion of epithelial cells
sara05146
Amoebiasis
Brite
KEGG Orthology (KO) [BR:
sara00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
101555310 (VCL)
04520 Adherens junction
101555310 (VCL)
09142 Cell motility
04820 Cytoskeleton in muscle cells
101555310 (VCL)
04810 Regulation of actin cytoskeleton
101555310 (VCL)
09150 Organismal Systems
09151 Immune system
04670 Leukocyte transendothelial migration
101555310 (VCL)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
101555310 (VCL)
09174 Infectious disease: parasitic
05146 Amoebiasis
101555310 (VCL)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sara04812
]
101555310 (VCL)
04147 Exosome [BR:
sara04147
]
101555310 (VCL)
Cytoskeleton proteins [BR:
sara04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
101555310 (VCL)
Exosome [BR:
sara04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
101555310 (VCL)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vinculin
VMAP-M0
Motif
Other DBs
NCBI-GeneID:
101555310
NCBI-ProteinID:
XP_012789712
LinkDB
All DBs
Position
Unknown
AA seq
935 aa
AA seq
DB search
MLQSDPYSVPARDYLIDGSRGILSGTSDLLLTFDEAEVRKIIRVCKGILEYLTVAEVVET
MEDLVTYTKNLGPGMTKMAKMIDERQQELTHQEHRVMLVNSMNTVKELLPVLISAMKIFV
TTKNSKNQGIEEALKNRNFTVEKMSAEINEIIRVLQLTSWDEDAWASKDTEAMKRALASI
DSKLNQAKGWLRDPGASPGDAGEQAIRQILDEAGKVGELCAGKERREILGTCKMLGQMTD
QVADLRARGQGASPVAMQKAQQVSQGLDVLTAKVENAARKLEAMTNSKQSIAKKIDSAQN
WLADPNGGPEGEEQIRGALTEARKIAELCDDPKERDDIMRSLGEISALTSKLTDLRRQGK
GDSPEARALAKQVATALQNLQSKANRAVANSRPTKAAVHLEGKIEQAHRWIDNPTVDDRG
VGQAAIRGLVAEGHRLANVMMGPYRQDLLAKCDRVDQLTAQLADLAARGEGESPQARALA
SQLQDSLKDLKAQMQEAMTQEVSDVFSDTTTPIKLLAVAATAPPDAPNREEVFDERAANF
ENHSGRLGATAEKAAAVGTANKSTVEGIQASVKTARELTPQVVSAARILLRNPGNQAAYE
HFETMKNQWIDNVEKMTGLVDEAIDTKSLLDASEEAIKKDLDKCKVAMANIQPQMLVAGA
TSIARRANRILLVAKREVENSEDPKFREAVKAASDELSKTISPMVMDAKAVAGNISDPGL
QKSFLDSGYRILGAVAKVREAFQPQEPDFPPPPPDLDQLRLADELAPPKPPLPEGEVPPP
RPPPPEEKDEEFPEQKAGEVINQPMMMAARQLHDEARKWSSKPGNAASEVGIGSVPESDA
ADAVGFLVPPDMEDDYEPELLVMPSNQPVNLPILAAAQSLHREATKWSSKGNDIIAAAKR
MALLMAEMSRLVRGGSGTKRALISVPRTSPKPQMR
NT seq
2808 nt
NT seq
+upstream
nt +downstream
nt
atgctgcagtcagacccctactccgtgcctgctcgagattatctcattgatgggtcaagg
ggaatcctctctggcacgtcagacctgctcctcaccttcgatgaggctgaggtgcgtaaa
attattcgagtttgcaaaggaattttggaatatcttacagtggcagaggtggtggagact
atggaagatttagttacttacacgaagaatcttggaccaggaatgactaagatggccaaa
atgatcgacgagaggcagcaggaactgacacaccaggagcaccgagtgatgctggtgaac
tcgatgaacaccgtcaaggagttactgccggttctcatttcagctatgaagatttttgta
acaactaaaaactcaaaaaaccaagggatagaagaagctttgaaaaatcgcaattttact
gtcgaaaagatgagtgctgaaatcaatgagatcatccgggtgctacagctcacatcttgg
gatgaagacgcgtgggccagcaaggacactgaagccatgaagagagccttggcctccata
gactccaaactgaaccaggccaaagggtggctccgtgaccccggcgcctccccaggggat
gccggcgagcaggccatcagacagatcttagatgaagctgggaaagttggtgagctctgc
gcaggcaaagagcgcagggagatcctcggaacttgcaaaatgctggggcagatgactgat
caggtggctgacctccgagccagaggacaaggagcctcccccgtggccatgcagaaagcc
cagcaggtgtcccaggggctggacgtgctcacggcgaaggtggagaatgcagcccgcaag
ctggaagccatgacaaactccaagcagagcattgcgaagaagatcgactccgcccagaac
tggcttgcagatccaaacggtgggccagaaggggaagaacagattcgaggagctttgact
gaagctcggaaaatagcggaattatgtgatgatccaaaagagagggacgacatcatgcgt
tctcttggagaaatttctgctctgacttctaaattaacagatctgcgcagacaggggaaa
ggagattccccagaggcccgagcactggccaaacaggtggccactgccttgcagaacctg
cagagcaaagccaacagggccgtggccaacagcaggcccaccaaggctgcagtccatctt
gagggcaagattgagcaagcacatcggtggatcgataaccccacagtggatgaccgggga
gttggtcaggctgccatccgggggcttgtggctgaagggcatcggctggctaatgtcatg
atgggaccttatcgccaagatcttcttgcaaagtgtgaccgagtggatcagctgacagct
cagctggccgatctggctgccagaggggaaggggagagcccccaggccagagcactggcg
tctcagcttcaggactccctgaaggacctgaaagcccagatgcaggaggccatgacccag
gaggtgtcagatgtcttcagtgataccacaactcccatcaagctgctggcagtggcggcc
actgcccctcccgatgctcccaacagggaagaggtattcgatgaaagggcagctaacttc
gagaaccactcaggccggcttggtgccacagcagagaaggcagccgctgtcgggacagca
aacaaatcgacggtggaaggtatccaggcatcggtgaagaccgcccgggaactcactcct
caggtcgtctcagctgcccggatcttacttaggaaccctggaaaccaagctgcttatgaa
cactttgagaccatgaaaaaccagtggattgataatgtggagaagatgacagggttggtg
gacgaagccatcgataccaagtctctgttggatgcttccgaagaagcgattaagaaggac
ctggacaagtgtaaagtggccatggctaacattcagccgcagatgctggtcgcgggggca
accagcatcgctcgcagggccaaccggatcctgctggtggctaagcgggaagtggagaac
tcggaggaccccaagttccgggaggccgtgaaggccgcctcggacgagctgagtaaaacc
atctcaccaatggtgatggatgccaaggccgtggcgggcaacatctctgacccgggtctg
cagaagagcttcctggactcaggataccggatcctgggagcagtcgccaaggtccgagaa
gccttccagcctcaggagcctgactttcccccgccgccgccagacctcgaccagctccgc
ctggcagatgaacttgctcctcccaaaccacctctgcctgagggtgaagttcctccgccc
agacccccgccacccgaggagaaggacgaggaattccccgagcagaaagccggggaggtg
attaaccagcccatgatgatggctgccaggcagctccatgacgaagcccgaaaatggtcc
agcaagccgggtaatgcagcctccgaggtgggtataggcagcgtgccagagtcagacgcg
gctgatgctgttgggttccttgtcccccctgacatggaagatgattacgaacctgagctg
ctggtaatgccatccaatcagccggtcaacctgcccattctggccgcggctcagtcattg
caccgggaagccaccaagtggtctagtaagggcaatgacatcattgcagcagccaagcgc
atggctctactgatggctgagatgtctcgactggtaagagggggcagcggcaccaagcgg
gcactgatcagtgtgccaaggacatcgccaaagcctcagatgaggtga
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