Sorex araneus (European shrew): 101555316
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Entry
101555316 CDS
T07854
Symbol
SLIT2
Name
(RefSeq) slit homolog 2 protein isoform X1
KO
K06839
slit 2
Organism
sara
Sorex araneus (European shrew)
Pathway
sara04360
Axon guidance
Brite
KEGG Orthology (KO) [BR:
sara00001
]
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
101555316 (SLIT2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
sara00536
]
101555316 (SLIT2)
Glycosaminoglycan binding proteins [BR:
sara00536
]
Heparan sulfate / Heparin
Axon guidance molecules
101555316 (SLIT2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
EGF
LRR_5
Laminin_G_1
Laminin_G_2
LRRNT
LRR_9
LRRCT
LRR_1
EGF_TEN
hEGF
LRR_14
JAG1-like_EGF2
EGF_DL_JAG
EGF_Teneurin
EGF_3
Motif
Other DBs
NCBI-GeneID:
101555316
NCBI-ProteinID:
XP_004616596
LinkDB
All DBs
Position
Unknown
AA seq
1530 aa
AA seq
DB search
MRGAGWPTRSLWLGLVLAILNQGAPQACPAQCSCSGSTVDCHGLALRSVPRNIPRNTERL
DLNGNNITRITKTDFAGLRHLRVLQLMENKISTIERGAFQDLKELERLRLNRNHLQLFPE
LLFLGTSKLYRLDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDLEVL
TLNNNNITRLSVASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCMGPS
HLRGHNVAEVQKREFVCSGHQSFMAPSCSVLHCPAACTCSNNMVDCRGKGLPEIPTNLPE
TITEIRLEQNSIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKI
TELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLR
AIQTMHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPRRLANKRIGQIKSKKFRCSA
KEQYFIPGTEDYRSKLSGDCFADLACPEKCRCEGTTVDCSNQKLTKIPDHIPQYTAELRL
NNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHK
MFKGLESLKTLMLRSNRISCVGNDSFIGLSSVRLLSLYDNQITTIAPGAFDTLHSLSTLN
LLANPFNCNCYLAWLGEWLRKKRIVTGNPRCQKPYFLKEIPIQDVAIQDFTCDDGNDDNS
CSPLSRCPAECACLDTVVRCSNKGLKALPKGIPRDVTELYLDGNQFTLVPKELSNYKHLT
LIDLSNNRISTLSNQSFSNMSQLLTLILSYNRLRCIPSRTFDGLKSLRLLSLHGNDISAV
PEGAFNDLSALSHLAIGANPLYCDCNMQWLSDWVKSEYKEPGIARCAGPGEMADKLLLTT
PSKKFTCQGPVDVNILAKCNPCLSNPCRNDGTCNNDPVDFYRCTCPYGFKGRDCDVPIHA
CISNPCKHGGTCHLKEGEKDGFWCICADGFEGENCEVNVDDCEDNDCENNSTCVDGINNY
TCLCPPEYTGELCEEKLDFCAQDLNPCQHDSKCILTPKGFKCDCTPGYIGEHCDVDFDDC
QDNKCKNGAHCTDAVNGYTCICPEGYSGLFCEFSPPMVLPRTSPCDNFDCQNGAQCIIRI
NEPVCQCLPGYQGDKCEKLVSVNFVNKESYLQIPSAKVRPQTNITFQIATDEDSGILLYK
GDRDHIAVELYRGRVRASYDTGSHPASAIYSVETINDGNFHIVELLTLDQSLSLSVDGGS
PKIITNLSKQSTLNLDSPLYVGGLPGKSNVAAALRQAPGQNGTSFHGCIRNLYINSELQD
FRTVPLHTGILPGCEPCHRKVCAHGTCQPSSQSGSTCACEEGWAGPLCDQSTNDPCLGNK
CVHGTCVPINAFSYSCKCLEGHGGVLCDEEEDLFNPCQTIKCKHGQCRLSGLGQPYCECS
SGYTGDGCDREISCRGERIRDYYQKQQGYTACQTTKKLSRLECRGGCPGGQCCGPLRSKR
RKYSFECTDGSSFVDEVEKVVKCGCTRCAS
NT seq
4593 nt
NT seq
+upstream
nt +downstream
nt
atgcgaggcgcgggctggccgacgcggtccctttggctgggcttggtgctggccatcctg
aaccagggggcgccgcaggcgtgcccggcgcagtgctcctgctccggcagcacggtggac
tgtcacgggctggcgctgcgcagcgtgccccggaatattccccgcaacaccgagagactg
gatttgaatggaaataacataacacggattaccaagacagattttgctggtcttagacac
ttaagagttcttcagcttatggagaataagattagcaccattgaaagaggagcattccag
gatcttaaagaactggagagactgcgtttaaacagaaatcaccttcagctgtttccggag
ttgctgtttctggggacatcgaagctataccggcttgatctcagtgaaaaccagattcag
gccattcccaggaaggctttccgtggggcagttgacattaaaaatctgcagctggattac
aaccagatcagctgtattgaagacggggcgttcagggctctcagggatctggaagtgcta
actctcaacaataacaacattactagactttcggtggccagtttcaatcacatgcctaaa
cttagaactttccgccttcattccaacaacctgtactgtgactgccacctggcctggctc
tctgactggctgcgccagagaccccgggtgggcctctacacccagtgtatgggcccatcc
cacctgcggggacataatgtagctgaggttcaaaagcgagaatttgtctgcagtggtcac
cagtcctttatggctccttcctgcagtgttttgcactgtcctgccgcttgtacctgtagc
aacaacatggtcgactgccgagggaaagggctccccgagatccccacaaatctgcctgag
accatcacagaaatacgtttggagcaaaactcaatcaaggtgatccctcctggggctttc
tctccatataaaaaactgagaagaattgacctgagcaataatcagatttctgaactagca
ccagatgctttccaaggactgcgctcgctgaattcacttgtcctctatggaaataaaatc
acagaacttcccaaaagtttgtttgaaggactattttctttacaactgctattgttgaat
gccaacaagataaactgcctgcgggtagatgcctttcaagacttgcacaacttgaacctt
ctctccttgtatgacaacaagcttcagacgatagccaagggaaccttttcacccctccgg
gccatccaaacgatgcatttggcccagaaccccttcatctgtgactgccatctcaagtgg
ctggcggattatctccataccaacccaatagagaccagcggggcccgctgcaccagcccc
cggcgcctggcaaacaaaagaatcgggcaaatcaagagcaagaaattccgttgctcagct
aaagagcagtatttcattccaggtacagaagattatcgatcaaaattaagcggggactgc
ttcgccgatctggcctgtcctgagaagtgccgctgtgaaggcaccaccgtggactgctcc
aaccagaagctcaccaaaatcccagaccacattccccagtacactgccgagctgcgtctg
aataataatgaattcaccgtgttggaagccacaggaatcttcaagaaacttcctcagtta
cgtaaaataaactttagcaacaataagatcacagacattgaagagggagcctttgaagga
gcatctggagtaaatgaaattctcctcacaagcaaccgtttggagaacgttcagcataag
atgttcaagggattggaaagtctcaaaactttgatgttgaggagtaatcgcataagctgt
gtagggaacgacagtttcatcggcctcagctccgtgcgtttgctctctctgtatgataat
caaattactacgattgcaccgggggcgttcgatactcttcattctctatctactctaaac
ctcttggctaatccttttaactgtaactgctacctggcctggttgggagagtggctccgg
aagaaaagaattgtaacgggaaaccctcgatgtcaaaagccctatttcctcaaagaaatc
cccatccaggacgtcgccatccaggatttcacctgtgatgatggaaacgatgacaatagc
tgctcccctctgtcccgctgtcctgcggagtgcgcgtgcctggacaccgtggtgcggtgt
agcaacaagggcctcaaggccttgcccaaaggcatcccaagagatgtcactgaattgtat
ctggatgggaaccaatttacactggttcccaaggaactttcaaattacaagcatttaact
cttatagacttgagtaacaaccgaataagcaccctctcgaatcagagcttcagtaacatg
tctcagctccttaccttaatccttagttacaaccgtttgagatgtattccttcacgaacc
ttcgatggattgaaatctcttcgattactttctttacatggaaatgatatatctgctgtg
cctgaaggtgcttttaatgatctttctgcattatcacacctagccattggtgccaaccct
ctttactgtgactgtaacatgcagtggttatccgactgggtaaagtcagaatataaggaa
ccaggaatcgcgcgctgtgctggccctggagaaatggcggataaactcttactcaccact
ccctccaaaaagttcacctgtcaaggtccagtggatgtcaatattctagctaaatgtaat
ccctgcttatcaaatccgtgtagaaatgatggcacctgtaacaatgatcctgtggacttc
tatcgctgcacctgtccttatggcttcaaagggcgggactgtgatgtccccattcacgcg
tgcattagcaacccgtgcaaacatggaggaacgtgccacttaaaagaaggagaaaaagat
ggattctggtgtatttgcgctgatggatttgaaggagaaaattgtgaagtaaatgttgat
gactgtgaagataatgattgtgaaaataactctacatgcgttgacggaattaataactac
acatgcctttgtccacctgagtatacaggcgaattgtgtgaggagaagctggacttctgt
gcccaggacctgaacccctgccagcatgactcgaagtgcatcctgaccccaaagggattc
aaatgtgactgcacacctggatacataggtgaacactgtgatgtagattttgatgactgc
caagataacaaatgtaaaaatggagctcactgcacggatgcagtaaatggctatacttgc
atctgcccagaaggttacagtggcctgttctgtgaattttccccacccatggtcctccct
cgtaccagcccctgtgataattttgactgtcagaatggagctcagtgcatcatcaggata
aacgagccagtatgtcagtgtttgcctggctatcagggagacaagtgtgaaaagctggtc
agtgtgaattttgtgaacaaagaatcgtatcttcaaattccttcagccaaagtgaggccc
caaaccaacatcacttttcagattgccaccgatgaagacagtgggatcctcctgtacaag
ggtgacagagaccacatcgctgttgaactctaccgggggcgggtccgtgccagctacgac
acaggctcccatccggcttctgccatttacagcgtggagacaatcaacgacgggaacttc
cacattgtggagctgctcaccctggaccagagtctctccctgtctgtggatggaggcagt
cccaaaatcatcaccaacttgtccaagcagtcaactctgaatcttgactccccactctat
gtaggaggcctgccagggaaaagcaacgtggctgcggccctgcgccaggctcctgggcag
aacggcaccagcttccacggctgcatccggaacctgtacatcaacagcgagctgcaggac
ttccgcacggtgcccctgcacacgggcatcctgccgggctgcgagccctgccacaggaag
gtgtgcgcccacggcacgtgccagcccagcagccagtcgggctccacctgcgcgtgcgag
gagggctgggccgggcccctgtgcgaccagagcaccaatgacccctgcctcgggaacaaa
tgcgtgcacggcacctgcgtgcccatcaacgccttctcctacagctgtaagtgcctggag
ggccacggcggcgtcctctgtgacgaggaggaggatctgttcaacccctgccagaccatc
aagtgcaagcacggccagtgtcggctctcggggctcggccagccgtactgtgagtgcagc
agtggctacactggggacggctgtgaccgagaaatctcctgtcgaggggagcggatacgg
gattactaccagaagcagcagggctacaccgcctgccaaaccaccaagaagctctcgcgc
ctcgagtgccgcgggggctgccccgggggccagtgctgcgggccgctgcgcagcaagcgg
cggaaatactccttcgagtgcacagatggctcctccttcgtggacgaggtggagaaggtg
gtcaagtgcggctgcacccgctgcgcctcctaa
DBGET
integrated database retrieval system
