Sorex araneus (European shrew): 101555737
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Entry
101555737 CDS
T07854
Symbol
YBX3
Name
(RefSeq) Y-box-binding protein 3
KO
K06099
cold shock domain protein A
Organism
sara
Sorex araneus (European shrew)
Pathway
sara04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
sara00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
101555737 (YBX3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sara03000
]
101555737 (YBX3)
03041 Spliceosome [BR:
sara03041
]
101555737 (YBX3)
Transcription factors [BR:
sara03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Cold-shock domain factors, DbpA-like
101555737 (YBX3)
Spliceosome [BR:
sara03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
101555737 (YBX3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CSD
OB_RNB
S1CSD-TOTE-2
Motif
Other DBs
NCBI-GeneID:
101555737
NCBI-ProteinID:
XP_004611471
LinkDB
All DBs
Position
Unknown
AA seq
402 aa
AA seq
DB search
MMYASQASLQPPVSPAARTPPGIVLSFPPSQPPRVPGTRQWELDKSRTRERSKTRTPGNP
APRQAGGARRERPARLGEDTAAPPLLLANGACVACSGVCSRVSPRDRQMLIYLLNPILAT
KVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGE
KGAEAANVTGPDGVPVEGSRYAADRRRYRRGYYGRRRGPPRNYAGEEEEEGSGSSEGFDP
PTADGQFSGARSQLRRPQYRPQYRQRRFPPYHVGQTLDRRSRVFPHPNRMQAGEIGEMKD
GVPEGAQLQGPVHRNPTYRPRYRRGPPRPRPAPAAGEAEDKENQQAANGPNQPSARRGYR
RPYNYRRRPRPPNAPAQDGKETKAGEAPSENPAPAAEQSSAE
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgatgtacgcatcacaagcaagtctgcaacccccggtgagccctgcagcaaggacgccg
cccgggatcgtcttgagcttcccaccgtctcaacccccccgagttcctgggaccagacaa
tgggaacttgacaagtctagaacccgagaaaggtccaagacgcgaactccggggaacccg
gcgccgcgccaggcaggaggagcgcggcgcgagcgcccagcccggctgggtgaagacacg
gcggcaccgccgctgcttcttgctaacggcgcctgcgtggcctgcagcggagtctgctct
cgggtttccccccgggatcgtcagatgctaatttatctgcttaatcctattttagccacc
aaagtccttggcaccgtcaaatggttcaacgtcagaaatggatatggatttataaatcga
aacgacaccaaagaagatgtctttgtacaccagactgccatcaagaagaacaacccccgg
aaatatctgcgcagtgtaggagatggagaaactgtagagtttgatgtggttgaaggagag
aagggtgcagaggcagccaacgtgactggcccggatggagttcccgtcgaagggagtcgc
tatgctgccgaccggcgccgctaccgacgtggctactacggcagacgccgaggaccgccc
cggaattacgctggggaggaggaggaggaagggagcggcagcagtgaaggatttgacccc
cccaccgctgacgggcagttctctggggcccggagtcagctgcgccgcccccagtaccgc
cctcagtaccggcagcggcggttcccgccttaccacgtgggacagaccttggaccgtcgc
tcccgggtctttccccatcccaacagaatgcaggcgggagagatcggcgagatgaaggac
ggagtccccgagggagcccagcttcagggcccggttcataggaatcccacttaccgcccg
aggtaccgcaggggacctcctcgcccgcgccctgcgcccgctgccggagaggctgaggac
aaagagaaccagcaggcggccaatgggcccaaccagccatctgctcgccgggggtaccgg
cgcccctacaactaccggcgtcgtccccgtccgcccaacgctcctgcacaggatggcaaa
gagaccaaggcaggtgaagccccatctgagaaccccgctccggccgccgagcagagcagt
gccgagtaa
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