KEGG   Sorex araneus (European shrew): 101555737
Entry
101555737         CDS       T07854                                 
Symbol
YBX3
Name
(RefSeq) Y-box-binding protein 3
  KO
K06099  cold shock domain protein A
Organism
sara  Sorex araneus (European shrew)
Pathway
sara04530  Tight junction
Brite
KEGG Orthology (KO) [BR:sara00001]
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04530 Tight junction
    101555737 (YBX3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:sara03000]
    101555737 (YBX3)
   03041 Spliceosome [BR:sara03041]
    101555737 (YBX3)
Transcription factors [BR:sara03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   Cold-shock domain factors, DbpA-like
    101555737 (YBX3)
Spliceosome [BR:sara03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA binding proteins (RBPs)
    101555737 (YBX3)
SSDB
Motif
Pfam: CSD OB_RNB S1CSD-TOTE-2
Other DBs
NCBI-GeneID: 101555737
NCBI-ProteinID: XP_004611471
LinkDB
Position
Unknown
AA seq 402 aa
MMYASQASLQPPVSPAARTPPGIVLSFPPSQPPRVPGTRQWELDKSRTRERSKTRTPGNP
APRQAGGARRERPARLGEDTAAPPLLLANGACVACSGVCSRVSPRDRQMLIYLLNPILAT
KVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGE
KGAEAANVTGPDGVPVEGSRYAADRRRYRRGYYGRRRGPPRNYAGEEEEEGSGSSEGFDP
PTADGQFSGARSQLRRPQYRPQYRQRRFPPYHVGQTLDRRSRVFPHPNRMQAGEIGEMKD
GVPEGAQLQGPVHRNPTYRPRYRRGPPRPRPAPAAGEAEDKENQQAANGPNQPSARRGYR
RPYNYRRRPRPPNAPAQDGKETKAGEAPSENPAPAAEQSSAE
NT seq 1209 nt   +upstreamnt  +downstreamnt
atgatgtacgcatcacaagcaagtctgcaacccccggtgagccctgcagcaaggacgccg
cccgggatcgtcttgagcttcccaccgtctcaacccccccgagttcctgggaccagacaa
tgggaacttgacaagtctagaacccgagaaaggtccaagacgcgaactccggggaacccg
gcgccgcgccaggcaggaggagcgcggcgcgagcgcccagcccggctgggtgaagacacg
gcggcaccgccgctgcttcttgctaacggcgcctgcgtggcctgcagcggagtctgctct
cgggtttccccccgggatcgtcagatgctaatttatctgcttaatcctattttagccacc
aaagtccttggcaccgtcaaatggttcaacgtcagaaatggatatggatttataaatcga
aacgacaccaaagaagatgtctttgtacaccagactgccatcaagaagaacaacccccgg
aaatatctgcgcagtgtaggagatggagaaactgtagagtttgatgtggttgaaggagag
aagggtgcagaggcagccaacgtgactggcccggatggagttcccgtcgaagggagtcgc
tatgctgccgaccggcgccgctaccgacgtggctactacggcagacgccgaggaccgccc
cggaattacgctggggaggaggaggaggaagggagcggcagcagtgaaggatttgacccc
cccaccgctgacgggcagttctctggggcccggagtcagctgcgccgcccccagtaccgc
cctcagtaccggcagcggcggttcccgccttaccacgtgggacagaccttggaccgtcgc
tcccgggtctttccccatcccaacagaatgcaggcgggagagatcggcgagatgaaggac
ggagtccccgagggagcccagcttcagggcccggttcataggaatcccacttaccgcccg
aggtaccgcaggggacctcctcgcccgcgccctgcgcccgctgccggagaggctgaggac
aaagagaaccagcaggcggccaatgggcccaaccagccatctgctcgccgggggtaccgg
cgcccctacaactaccggcgtcgtccccgtccgcccaacgctcctgcacaggatggcaaa
gagaccaaggcaggtgaagccccatctgagaaccccgctccggccgccgagcagagcagt
gccgagtaa

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