Sorex araneus (European shrew): 101555761
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Entry
101555761 CDS
T07854
Symbol
HELZ2
Name
(RefSeq) helicase with zinc finger domain 2
KO
K25165
3'-5' exoribonuclease HELZ2 [EC:
3.1.13.1
5.6.2.6
]
Organism
sara
Sorex araneus (European shrew)
Brite
KEGG Orthology (KO) [BR:
sara00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sara03019
]
101555761 (HELZ2)
Enzymes [BR:
sara01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
101555761 (HELZ2)
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
101555761 (HELZ2)
Messenger RNA biogenesis [BR:
sara03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
101555761 (HELZ2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_12
AAA_11
RNB
AAA_19
AAA_30
PhoH
ResIII
AAA_22
nSTAND3
DEAD
UvrD-helicase
AAA_16
UvrD_C_2
SLFN-g3_helicase
Viral_helicase1
AAA_24
AAA_25
zf-C2H2_jaz
Bac_DnaA
Motif
Other DBs
NCBI-GeneID:
101555761
NCBI-ProteinID:
XP_004620304
LinkDB
All DBs
Position
Unknown
AA seq
2615 aa
AA seq
DB search
MAVWEAEQLGGLQRGALLAPPEPAPQVRLYCPACLLSCGSPEAFENHCASLEHRQMVALE
PAAAWEHRSPPAGLSTFALCPRPELCEYGRLCTKAHSPEELMEWTQRAESVRLREEAAWK
EGLMPYQERLLDEYQRSGSELLVLAEAVEGVSAACDQPLLLRAAHKVTQHSWTFTLSSEE
PLQHVALLRQEPGAAFSLVAPGLPPGQQYACGERFRTPDSPLRARVAVQVLGASFGTFEQ
WLVFDFGRRPALLRKLTVQLGQELCPALGGPPAPDLPQPLEHWHTGNRHVVPSVERTAEQ
AALLAKYKGPDLALDFSRGGQAPGPVSRTSYRQRMHQFLYEEEAAQQRLVAKLNLRGPVS
LQPALQTPALGMQFAPPGALYAEVPVPPSLTPDSDQGFLLGRAVNTALVAPVPAPDLTVF
EVRLESRASWERALWLLLPSHCCQALGLQAGTSCTLEVQFQVDPLVFRRWHQAVDALADV
RLVVPDLQGCALPRPLPRPPTVHGNRKQKLAVAAIVGGHPGGPEPMAPLLIYGPFGTGKT
YTLAMAALEVVRQPHTRVLICTHTNSAADIYIREHFHGHILSGHPEAAPLRVMFTDRPPG
QTDAVTLQYCCLSADRQAFRPPSSAELQRHRILVTTTAQARQLRVPTGFFSHIFLDEAAQ
MLECEALVPLGHATASTRVVLAGDHMQVTPRLFSVPRDQAPGHTLLHRLFRHYQQQPHEA
AQHSRIIFHENYRCTEAIIHFVARHFYVAKGNPIHASGKVPCHPRLYPLMFCHVAGCPER
DLSMTSWLNLAEISQVVEKVQEIVGAWPRCWGGCEQTQICVVSHGAQVSALRQELRKRSL
GQVSVGSFEILPGREFRVVVLSTVHTHRSLRGPGAPSPDFFVDARVLNTILTRAQSQVVA
VGDAVALCSFGACSKLWKSFIRECVEHHSVCPQDLSLEQIEGGVAAQRRWAHGPLDMPAP
QGPAAGTAAEGAACPRSPAGGGPVAEPEAPGPETAAQTASGEREEAAAVAGPLAMDEGAL
SGPGDAEEAESDFWLFQGELDPEDSILQELLDESVKMAVTVREDGLLDTVARPRSPQQAR
QYVNLPRAMLCTLLRAEPERYRRCTFVQETFERATAVPLDEAGSGPIQVRGRLRCGMAFT
GDEVVVKVGDVGPGRLQGCVVGVLRRRRQELVFVCRMDEWDPRIMTPIDGSVTKIFVAEL
RDPQEVPLHRLVRGRLERAGTERLAHSARRKRLFRVCVVLWRERFYFPLGVVLEVLPEAS
SWEHGIHALALEYSLRPPAPEPAAIAAALQKYQAELGRVSARRQDCRGILTFTVDPQDAC
NLDDAISVRDLGPRYEVAVHIADVASCVPRGGVLDTEARRRGTAFYAPERDPVPMLPTSL
CQQALSLLPGQDRLAISLFLTVEKGSDRLKDVCFAPSLVRSDRQLSYEEAERLIQQHPGA
GLELPARLDSVAACVVAACYLSRVLRGRRLQRACYYEPPDEDSELGFRAAHSMVKEYMVQ
FNSLAAEFLVGSEVTREVTPLRWQPAPSRHQLETLSEKHAAWLPLSLPLAQRLGGHGPPA
AQLPLLATLWRRIQLAAQAGDLSLLVDLVATDDLHPALVPVALDFHRALACSVFCRSGPS
PQPQLGHYSLQVDWYTWATSPIRRYLDLVLQRQLLQALGYGGAAYSAQDIDELCQEFSHR
NARAQTYQRRARSLHLAVRLRAQPQAKLGVAVDVEAGARCFKLLFPADPDSLPDPCRVHY
RSLQLAEPPQALEGQPGLRLTWRRRIYSVREDTACLPPPGALLDPYRRPVDSGLWQQLLE
LVQEQCWPEAAALVQAQGTAEPKPLELGHARRSPCGLFVEVSRDLRAGDVLCMQLGPALQ
QGFLAPAPQLWAVVPGLSLCLEHMERPGHCFSGLELQTGRDRCQDVAEYMSVWRPFCALE
AVTGAVTENDSITLQGVHISWGPERTAQGRLQGSFRLGADLLLRHCINISFSHCYLCIRL
EGLQPAQAPAGPGPAAPFTTDPDAFTWVAHGLTGTEDQEGRDVARFVPFFVQHMAMEKVP
EQVLKPDARFTVEVLPKQLPDLRKEEAVCGLEEASPLVISIALGQPLALPRRQLPHRGTC
SRLLGQRHFDIPHSRHQLNPSQTEAVREALKKQFTVIQGPPGTGKTVVALHIVFWFHKSN
EERALARSGPGRRKYPGGPHILYCGPSNKSVDVLAGLLLSRAGELKPLRVYSEQAEGTEF
PLPGVGSRGLSRRSPGEGRPNQALRSISLHHRIRQPPNPFASDIKAFDARLRSGDILSRE
ELAEYRMVLSNARSYELEQHHVILCTCSCAASASLKSLNVWQVLVDEAGMATEPETLIPL
VKFPRAEKVVLLGDHKQLRPVVKNEQLQTLGLDRSLFERYHKDAFMLDTQYRMHKGICAF
PSMEFYQNKLKTWPELRRGPSVLGHPGRDSCPVIFGHIEGHEHSLLVSTDEGNENSKANL
EEVDKVVHITKELILGRTVQPEEIAILTPYNAQAAEISKLLASKGLRGVTVSSITKSQGS
EWRYVLVSTVRSCPEADVDQRPTKGWLKKFLGFVVDPNQVNVAITRAQEGLCLIGNQVLL
RCCPLWRRLLEFCEEQQSLVPATQIQVRKKPAVSF
NT seq
7848 nt
NT seq
+upstream
nt +downstream
nt
atggccgtgtgggaggccgagcagctgggcgggctccagcggggggcccttctcgcgccc
cctgagccggccccccaggtgcggctgtactgcccggcctgcctgctgtcctgcggctct
cccgaggccttcgagaaccactgcgcctccctggagcacaggcagatggtggccctggag
ccggccgccgcctgggagcaccgcagcccgcccgcaggcctgtccaccttcgcgctctgc
cccaggcccgagctctgtgagtacggacggctctgcaccaaggcccactccccggaagag
ctcatggagtggacccagagggccgagagtgtgcggctgcgggaggaggcggcctggaag
gaagggctgatgccctaccaggagcggctgctggatgagtatcagcgcagcgggagcgag
ctgctggtgctggccgaggcggtggagggcgtgtcggctgcctgtgaccagcccctgctg
ctgcgggcagcccacaaggtgacgcagcacagctggacgttcaccctgagctccgaggag
cccctgcagcacgtggccctgctcagacaggagcccggagccgccttctcgctggtggcc
cctggcctgcccccggggcagcagtatgcctgcggcgagcgcttccggacgcccgactcg
cccctccgggctcgggtggccgtgcaggtgctcggcgcctccttcggcacctttgagcag
tggctggtcttcgatttcggccgccggcctgcgctgctgcggaaactgaccgtgcagctg
ggccaggagctctgcccggcactcggggggccccccgcccccgacctgccgcagccgctg
gagcactggcacacgggcaaccgccatgtcgtgcccagcgtggagcggaccgccgagcag
gcagccctcttggccaagtacaaggggcctgacctagccctggacttcagccgtggcggc
caggccccggggcccgtgtcccgcaccagctaccggcagaggatgcaccaatttctctac
gaggaggaggcggcacagcagcgactggtggccaagctgaacctgcggggtccagtgtcc
ctccagccagccctgcagacgcccgcgctgggcatgcagtttgcgcccccgggcgccctc
tacgcggaggtgcccgtgcccccctccctgacgccggactcggaccagggcttcttgctg
ggccgggcagtgaacaccgcgctggtggccccggtgcctgccccggacctcacggtgttc
gaggtgcggctggagagccgggccagctgggagcgggccctgtggctgctgctgccctcc
cactgctgccaggcgctggggctgcaggccggcaccagctgcaccctggaggtgcagttc
caggtggaccccctggtcttccgccgctggcaccaggcagtggacgcgctggccgacgtg
cgcctggtggtgcccgacctgcagggctgtgcgctgccccggcccctgccccgcccgccc
acggtgcacggcaaccgcaagcagaagctggccgtggcggccatcgtgggtggccacccc
ggcggccccgagcccatggcccccctgctcatctacggccccttcggcacgggcaagacc
tacacgctggccatggcggccctggaggtggtgaggcagccgcacaccagggtgctcatc
tgcacacacaccaacagcgcggccgacatctacatccgggagcacttccacggccacatc
ctcagcggccaccccgaggcagcaccgctgcgggtgatgttcacggaccggccgcccggg
cagacagacgcagtcacgctgcagtactgctgcctgagcgccgaccgccaggccttccgg
ccgcccagcagcgccgagctgcagcggcaccgcatactggtcaccaccacggcgcaggcg
cggcagctgcgggtgcccaccggcttcttctcgcacatcttcctcgatgaggccgcccag
atgctggagtgcgaggcgctggtgccgctcggccacgccacggccagcacccgcgtggtg
ctggcgggtgaccacatgcaggtcacgccccggctcttcagcgtgccgcgggaccaggcg
cccggccacacgctgctgcaccgcctcttccggcactaccagcagcagccgcacgaggcc
gcccagcacagccgcatcatcttccacgagaactaccgctgcaccgaggccatcatccac
ttcgtggcgcggcacttctacgtggccaagggcaaccccatccacgccagcggcaaggtg
ccgtgccacccccgcctctacccgctcatgttctgccacgtggcgggctgcccggagcgc
gacctgtccatgacgtcctggctcaacctggccgagatcagccaggtggtggagaaggtg
caggagatcgtgggcgcctggccacgctgctggggcggctgcgagcagacgcagatctgc
gtcgtctcccacggtgcccaggtgagcgcgctgcggcaggagctgaggaagcggagcctg
ggccaggtgtccgtgggcagctttgagatcctgccaggccgtgagttccgcgtggtggtc
ctcagcacggtgcacacccaccgcagcctgcggggcccgggcgcgcccagccctgacttc
ttcgtcgacgcgcgggtgctcaacaccatcctgacccgtgcccagtcgcaggtggtggcc
gtgggcgacgccgtggccctctgctccttcggggcctgcagcaaactgtggaagagcttc
atccgggagtgcgtggagcaccacagtgtctgcccccaggacctgtcgctggagcagatc
gagggcggggtggccgcccagcgacgctgggcccacggccccctggacatgccggcaccc
cagggcccagctgcgggcaccgcggctgagggggccgcgtgccccaggagccctgccggg
ggtgggcctgtggccgagccggaggcgccaggtcccgagacagcagcccagacggcctct
ggggagagggaggaggcggccgcagtggccgggccactggccatggatgagggggcgctc
tcgggccccggggatgccgaggaggccgagtccgacttctggctattccagggggagctg
gaccccgaggactccatcctgcaggagctgctggacgagagtgtgaagatggctgtgaca
gtgcgggaggacgggctgctggacacggtggcccggcccaggtccccgcagcaggcccgg
cagtacgtgaacctgccgcgcgccatgctgtgcacgctgctgcgtgccgagcctgagcgg
taccggcgctgcacctttgtgcaggagaccttcgagagggccacggcggtgccgctggac
gaggcgggctcagggcccatccaggtgcggggccgcctgcgctgcggcatggccttcacg
ggggacgaggtggtggtgaaggtcggcgacgtgggccctgggcggctgcagggctgtgtg
gtgggcgtgctccggcgccggcggcaggagctggtgttcgtctgccgcatggacgagtgg
gacccgcgcatcatgacccccatcgacggctccgtgaccaagatcttcgtggcagagctg
agggacccgcaagaggtgcctctgcaccggctggtgcggggccgcctggagcgcgcgggg
acggagcggctggcacacagcgctcgccgcaagcggctcttccgcgtgtgtgtggtgctg
tggcgcgaacgcttctacttcccgctgggcgtcgtgctggaggtgctgcccgaagcgtcc
agctgggagcacggcatccacgccctggccctggagtacagcctgaggcccccggccccg
gagcccgccgccattgccgcggccctgcagaagtaccaggcagagctgggcagggtgtct
gcccgccggcaggactgccgcggcatcctcaccttcaccgtggacccgcaggacgcctgc
aacctggacgatgccatcagcgtccgggacctgggccccaggtacgaggtggccgtgcac
atcgccgacgtggccagctgtgtgcccaggggcggtgtcttggacaccgaggcccgcagg
cggggcacggccttctacgcccccgagcgggatcccgtgcccatgctgcccaccagcctc
tgccagcaggcgctgagcctcctgcccggccaggaccgcctggccatctccctcttcctc
accgtggagaagggcagcgaccggctcaaggacgtctgctttgcaccctcgctggtgcgc
tccgaccggcagctgtcctacgaggaggcggagaggctcatccagcagcacccgggggca
ggcctcgagctgcccgcccgcctggactccgtggccgcctgcgtggtggccgcctgctac
ctctcccgggtgctgcgcgggcgccggctgcagcgcgcctgctactatgagcccccggac
gaggacagtgagctcggcttccgcgcggcacacagcatggtcaaggagtacatggtccag
ttcaatagcctggcggctgagttcctggtgggcagcgaggtcacacgggaggtcacgccg
ctgcgctggcagccggctcccagcagacatcagctggagacgctgagtgagaagcacgcg
gcctggctgcccctctcgctgcccctggcccagcgtctgggcggccacgggcccccggcc
gcccagctgcccctgctggccaccctctggaggcgcatccagctcgcagcccaggccggg
gacctgtcgctgctggtggacctggtggccacggatgacctgcaccccgcactggtgccc
gtggcgctggacttccaccgggcactggcctgctctgtgttctgccgctctgggccgagc
ccgcagccacagctgggccactactccctgcaggtggactggtacacctgggccacctcg
cccatccgcaggtacctggacctggtgctgcagcgccagctgctgcaggcactgggctac
gggggcgccgcctacagcgcccaggacatcgacgagctctgccaggagttcagccaccgg
aacgcgcgtgcccagacctatcagcgccgggccaggagcctgcacctggccgtgaggctc
agggcccagccccaggccaagctgggcgtggcggtagatgtggaggcgggcgcccgctgc
ttcaagctgctcttccctgccgaccccgacagcctgccggacccctgccgggtgcactac
cgctccttgcagctggccgagcccccacaggccctggagggccagccgggcctgcggctc
acgtggcgtcgccgcatctactcggtgcgggaggacacggcgtgcctgccgcctcccggt
gccctgctggacccctaccgccggcccgtggactcgggcctgtggcagcagctgttggag
ctggtgcaggagcagtgctggccggaggcggccgccctggtgcaggcgcagggcacggca
gagccgaagccgctggagctgggccacgcgcggcggagcccgtgtgggctgttcgtggag
gtctcccgcgacctgcgtgccggggacgtgctgtgcatgcagctgggccccgccctgcag
cagggcttcctggcgcctgcaccgcagctctgggccgtggtgcccggcctcagcctgtgc
ctggagcacatggagcgcccaggacactgcttctcgggcctcgagctccagacggggcgg
gaccgctgccaggatgtggccgagtacatgagcgtgtggaggccgttctgcgcgctggag
gcggtcaccggcgcggtgactgagaacgactccatcacgctgcagggcgtgcacatctcc
tggggcccggagcgcaccgcgcagggccggctgcagggctccttccgcctgggcgccgac
ctcctgctccgccactgcatcaacatcagcttcagccactgctacctctgcatccggctg
gaggggctgcagccagcccaggcccccgccggcccaggcccggcggcccccttcaccacg
gatcctgacgccttcacctgggtggcccacgggctgacgggcaccgaggaccaggagggt
cgggacgttgccagattcgtacccttcttcgtccagcacatggccatggagaaggtccca
gagcaggtgctgaagccggacgcccggttcaccgtcgaggtgctgcccaagcagctccct
gacctccgtaaggaagaggccgtgtgtgggctggaggaggcctccccgctggtcatcagc
atcgccctcggccagcccctggcgctcccccgccggcagctcccgcacagagggacctgc
agcaggctgctcgggcagagacacttcgacatccctcacagccgccatcagctgaacccc
agccagacggaggccgtgcgggaggccctgaagaagcaattcacagtcatccagggccca
ccaggcacggggaagactgtggtggccctgcacattgtcttctggttccacaagtccaac
gaggagcgggcgctggccaggagcggcccgggcaggaggaagtacccagggggcccccac
atcctctactgcggaccctccaacaagtcggtggatgtcttggcaggtctgctcctgagc
agggcgggagagctgaagcccctccgtgtgtacagcgagcaggccgagggcaccgagttc
cccctgcccggcgtgggcagcaggggcctgtccaggaggagccccggggaggggcggcca
aaccaagccctcaggagcatcagcctccaccaccgcatccggcagccgcccaaccccttc
gcctcggacatcaaggcctttgacgcgcggctgcggagcggggacatcctgtccagagag
gagctcgcggagtaccggatggtgctgagcaacgcacggagctatgagctggagcagcac
cacgtgatcctctgcacgtgctcctgcgcggcctcggccagcctcaagagcctgaacgtg
tggcaggtgctggtggacgaggccggcatggccaccgagcccgagacgcttattcccctg
gtgaagttccccagggccgagaaggtggtcctccttggggaccacaagcagcttcggccc
gtggtcaagaacgagcagctgcagaccctgggactggaccggtccctctttgagcgctac
cacaaggacgccttcatgctggacacgcagtaccgcatgcacaagggcatctgtgccttc
ccgtccatggagttctaccagaacaagctgaagacatggccagagctccggcgggggccc
agcgtgctaggccatcccggcagggacagctgccctgtcatctttggccacatcgagggc
cacgagcatagcctgctggtgtccacagatgaagggaatgagaactccaaagccaacctg
gaggaggtggacaaggtggtccacatcaccaaggagctgattctggggcgcacggtgcag
cccgaggaaatcgccatcctcacgccatacaacgctcaggccgcagagatcagcaagctc
ctggcctccaagggcctccggggagtgactgtgtcctccatcaccaagagccagggcagc
gagtggcgctacgtgctggtgagcaccgtgcgctcctgtcccgaggccgacgtggaccag
cggcccaccaaaggctggctgaagaagttcctgggcttcgtggtggaccccaatcaagtg
aacgtggccatcacccgtgcccaggaggggctctgcctcatcggaaaccaggtccttctg
cgctgctgcccgctctggcgccggctcctagaattctgcgaggagcagcagagcttggtg
ccggccacccagatccaggtccggaagaagcctgctgtttccttctga
DBGET
integrated database retrieval system
