Sorex araneus (European shrew): 101555785
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Entry
101555785 CDS
T07854
Symbol
PCDH17
Name
(RefSeq) protocadherin-17
KO
K16499
protocadherin delta 2
Organism
sara
Sorex araneus (European shrew)
Brite
KEGG Orthology (KO) [BR:
sara00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sara04515
]
101555785 (PCDH17)
Cell adhesion molecules [BR:
sara04515
]
Cadherins
Protocadherins
101555785 (PCDH17)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_3
Cadherin_C_2
PepSY
Motif
Other DBs
NCBI-GeneID:
101555785
NCBI-ProteinID:
XP_004604051
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All DBs
Position
Unknown
AA seq
1160 aa
AA seq
DB search
MYLSICCCFLLWAPALTLKNLNYSVPEEQGAGTVIGNIGKDARLQPGLPPAERGGPGGRS
KSGSYRVLENSAPHLLDVDADSGLLYTKQRIDRESLCRHNAKCQLSLEVFANDKEICMIK
VEIQDINDNAPSFPSDQIEMDISENAAPGTRFPLTSAHDPDAGDNGLRTYLLTRDDHGLF
ALDVKSRGDGTKFPELVIQKALDREQQNHHTLVLTALDGGEPPRSATVQINVKVIDSNDN
SPVFEAPSYLVELPENAPLGTVVIDLNATDADEGPNGEVLYSFSSYVPDRVRELFSIDPK
TGLIRVKGNLDYEENGMLEIDVQARDLGPNPIPAHCKVTVKLIDRNDNAPSIGFVSVRQG
ALSEAAPPGTVIALVRVTDRDSGKNGQLQCRVLGGGGPGGGGGLGGTAGAVPFKLEENYD
NFYTVVTDRPLDRETQDEYNVTIVARDGGSPPLNSTKSFAVKILDENDNPPRFTKGLYVL
QVHENNIPGEYLGSVLAQDPDLGQNGTVSYSILPSHIGDVSIYTYVSVNPTNGAIYALRS
FNYEQTKAFEFKVLAKDSGSPAHLESNATVRVTVLDVNDNAPVIVLPTLQNDTAELQVPR
NAGLGYLVSTVRALDSDFGESGRLTYEIVDGNDDHLFEIDPSSGEIRTQHPFWEDVTPVV
ELVVKVTDHGKPTLSAVAKLIIRSVSGSLPEGVPRVNGEQHHWDMSLPLIVTLSTISIIL
LAAMITIAVKCKRENKEIRTYNCRIAEYSHPQLGGGKGKKKKINKNDIMLVQSEVEERNA
MNVMNVVSSPSLATSPMYFDYQTRLPLSSPRSEVMYLKPASNNLTVPQGHAGCHTSFTGQ
GTNASETPTTRMSIIQTDNFPAEPNYMGSRQQFVQSSSTFKDPERASLRDSGHGDSDQAD
SDQDTNKGSCCDMSVREALKMKTTSTKSQPLEQEPEECVNCTDECRVLGHSDRCWMPQFP
AANQAENADYRTNLFVPTVEANVETETYETVNPTGKKTFCTFGKDKREHTILIANVKPYL
KAKRALSPLLQEVPSASSSPTKACIEPCTSTKGSLDGCEAKAGALAEASSQYLPTDSQYL
SPSKQPRDPPFMASDQMARVFADVHSRGSRDSSEMGAVLEQLEHPSRDLGRESVDAEEVV
REIDKLLQDCRGNDPVAVRK
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atgtacctttccatctgttgctgttttctcctctgggcccctgccctgacgcttaagaac
ctcaactactccgtgccggaggagcagggggccggcacggtcatcggcaacatcggcaaa
gatgctcgactgcagccggggcttccgcccgcggagcgcggcggcccgggcgggcgaagc
aagtcgggcagctaccgagtgctggagaactcagcgccgcacctgctggacgtggacgcc
gacagcgggctcctctacaccaagcagcgcatcgaccgcgagtccctgtgccgccacaac
gccaagtgccagctgtccctcgaagtgttcgccaacgacaaggagatctgcatgatcaaa
gtggagatccaagacatcaacgacaacgcgccctccttcccttcggatcagatcgagatg
gacatttcggagaacgcggccccggggacccgcttccccctcaccagcgcgcatgacccg
gacgcgggcgacaacggactccgcacctatctgctcactcgcgacgatcacggcctcttt
gcgttggatgtcaagtcccgcggcgacggcaccaagttcccggagctggtcatccagaaa
gcgctggaccgcgagcagcagaaccaccacacgctcgtgctgaccgccctggacgggggt
gagcctccccgttccgccacggtgcagatcaacgtgaaagtgattgactcgaacgacaac
agtccggtcttcgaagccccctcctacctggtagagctgcccgagaacgcccccctgggc
accgtggtcatcgacctgaacgccaccgacgccgatgagggcccgaacggagaagtgctc
tattccttcagcagctacgtgccagaccgcgtgcgggagctcttctccatcgaccccaag
accggcctgatccgggtgaagggtaacctggactatgaggagaacgggatgctggagatc
gacgtgcaggccagagacctggggcccaaccctattccggcccactgcaaggtcacggtc
aagctcatcgaccgcaacgacaacgcgccgtctatcggtttcgtctccgtgcgccagggg
gcgctgagcgaagccgcccctcccggcactgtcatcgccctggtgcgggtcactgaccgc
gactcgggcaagaacggacagctgcagtgccgggtcctgggcggaggagggccgggaggc
ggcggcggcctaggcgggacggcgggcgctgtgcctttcaagctcgaggagaactacgac
aacttctacaccgtggtgaccgaccgccccctggaccgcgagacccaggacgagtacaac
gtgaccatcgtggcccgggacgggggctcgccgccgctcaactccaccaagtccttcgct
gtgaagattctggacgagaatgacaaccctccgcggttcaccaaggggctgtacgtgctg
caggtgcacgagaacaacatcccaggagagtacctgggctcagtgctcgcccaggacccc
gacctgggccagaacggcaccgtgtcctactccatcctgccctcgcacatcggcgacgtg
tccatctacacctacgtgtccgtgaaccccaccaacggggccatctacgccctgcgctcc
tttaactacgagcagaccaaggcttttgagttcaaggtccttgctaaggactccgggtcg
cccgcgcacctggagagcaatgccacggtgcgggtgactgtgctagacgtgaatgacaac
gcgccggtgatcgtgctgcccacgctgcagaacgacacggccgagctgcaggtgcctcgc
aacgccggcctgggctacctggtgagcaccgtgcgcgccctggacagcgactttggcgag
agtgggcgcctcacctatgagatcgtggacggtaacgacgaccacctgttcgaaatcgac
ccgtccagcggcgagatccgcactcagcaccccttctgggaagacgtgacgcccgtggtg
gagctggtggtgaaagtgacggaccacggcaagcccaccctttccgcggtggccaaactc
atcatccgctcggtgagcggctccttgcccgagggggtgccccgggtgaacggcgaacag
caccactgggacatgtcgctgccgctgatcgtgactctgagcaccatctccatcatcctc
ctagcggccatgatcaccatcgccgtcaagtgcaagagggagaacaaggaaatccgcact
tacaactgccgcatcgcggagtacagccacccgcagctgggcgggggcaagggcaagaag
aaaaagatcaacaaaaatgatatcatgctggtgcagagcgaagtggaggaaaggaacgcc
atgaatgtcatgaacgtggtgagcagcccttccctggccacttcccccatgtactttgac
taccagacccgcctgcccctcagctcgccccgctcagaggtgatgtatctcaaacctgcc
tccaacaacctgactgttccccagggccacgcgggttgccacaccagcttcaccggacaa
ggaactaatgcgagcgagacccccaccactcggatgtccattattcagacagacaatttt
cccgcagagcccaattacatgggcagcaggcagcagtttgttcaaagtagctccacgttt
aaggacccagaaagagccagcctgagagacagtgggcacggggacagtgatcaggctgac
agtgaccaagacactaacaaaggctcctgctgtgacatgtctgttagggaggcactcaag
atgaaaactacttcaactaaaagccaaccacttgaacaagaaccagaggagtgtgttaat
tgcacagatgaatgccgagtgcttggtcattctgataggtgttggatgccacagttccct
gcagccaatcaggctgaaaatgcagattaccgcacaaatctctttgtacccacagtcgaa
gctaatgttgagactgagacttatgaaactgtgaatcccactgggaaaaagactttttgt
acatttggaaaagacaagcgagagcacactattctcattgccaatgttaaaccttattta
aaagccaaacgtgccctgagccctctcctccaggaggtcccttctgcatccagcagcccc
accaaggcatgcattgagccttgcacctcaacgaaaggctctctggatggctgtgaagca
aaagctggggccctggccgaagcaagcagccaatacttgcccactgacagtcagtatctg
tcacccagcaagcaaccgagagacccgcccttcatggcatcagatcagatggccagggtc
ttcgcagatgtgcattccagaggcagccgggattccagcgagatgggcgctgttctggag
cagctggagcaccccagcagggatctgggccgagaatctgtggatgccgaggaggtcgtg
agagaaattgacaagctgttgcaggactgccggggaaacgaccctgtggctgtgagaaag
taa
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