Sorex araneus (European shrew): 101555803
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Entry
101555803 CDS
T07854
Symbol
CLTC
Name
(RefSeq) clathrin heavy chain 1 isoform X1
KO
K04646
clathrin heavy chain
Organism
sara
Sorex araneus (European shrew)
Pathway
sara04142
Lysosome
sara04144
Endocytosis
sara04721
Synaptic vesicle cycle
sara04961
Endocrine and other factor-regulated calcium reabsorption
sara05016
Huntington disease
sara05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
sara00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
101555803 (CLTC)
04142 Lysosome
101555803 (CLTC)
09150 Organismal Systems
09155 Excretory system
04961 Endocrine and other factor-regulated calcium reabsorption
101555803 (CLTC)
09156 Nervous system
04721 Synaptic vesicle cycle
101555803 (CLTC)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
101555803 (CLTC)
09164 Neurodegenerative disease
05016 Huntington disease
101555803 (CLTC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sara04131
]
101555803 (CLTC)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sara04147
]
101555803 (CLTC)
Membrane trafficking [BR:
sara04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
101555803 (CLTC)
Exosome [BR:
sara04147
]
Exosomal proteins
Proteins found in most exosomes
101555803 (CLTC)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_PEP5_VPS11
TPR_Vps41
TPR_1
Motif
Other DBs
NCBI-GeneID:
101555803
NCBI-ProteinID:
XP_004608674
LinkDB
All DBs
Position
Unknown
AA seq
1675 aa
AA seq
DB search
MAQILPIRFQEHLQLQNLGINPANIGFSTLTMESDKFICIREKVGEQAQVVIIDMNDPSN
PIRRPISADSAIMNPASKVIALKAGKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVA
LVTDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGA
MQLYSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGN
QPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISG
ETIFVTAPHEATAGIIGVNRKGQVLSVCVEEENIIPYITNVLQNPDLALRMAVRNNLAGA
EELFARKFNALFAQGNYSEAAKVAANAPKGILRTPDTIRRFQSVPAQPGQTSPLLQYFGI
LLDQGQLNKYESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKSVDPTLALSVYL
RANVPNKVIQCFAETGQVQKIVLYAKKVGYTPDWIFLLRNVMRISPDQGQQFAQMLVQDE
EPLADITQIVDVFMEYNLIQQCTAFLLDALKNNRPSEGPLQTRLLEMNLMHAPQVADAIL
GNQMFTHYDRAHIAQLCEKAGLLQRALEHFTDLYDIKRAVVHTHLLNPEWLVNYFGSLSV
EDSLECLRAMLSANIRQNLQICVQVASKYHEQLSTQSLIELFESFKSFEGLFYFLGSIVN
FSQDPDVHFKYIQAACKTGQIKEVERICRESNCYDPERVKNFLKEAKLTDQLPLIIVCDR
FDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRLPVVIGGLLDVDCSEDVIKNLILVVRGQF
STDELVAEVEKRNRLKLLLPWLEARIHEGCEEPATHNALAKIYIDSNNNPERFLRENPYY
DSRVVGKYCEKRDPHLACVAYERGQCDLELINVCNENSLFKSLSRYLVRRKDPELWGSVL
LESNPYRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFSE
HRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELFEEAFAIFRKFDVNTS
AVQVLIEHIGNLDRAYEFAERCNEPAVWSQLAKAQLQKGMVKEAIDSYIKADDPSSYMEV
VQAANTSGNWEELVKYLQMARKKARESYVETELIFALAKTNRLAELEEFINGPNNAHIQQ
VGDRCYDEKMYDAAKLLYNNVSNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFAC
VDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTEL
AILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEYDNAIITMMN
HPTDAWKEGQFKDIITKVANVELYYRAIQFYLEFKPLLLNDLLMVLSPRLDHTRAVNYFS
KVKQLPLVKPYLRSVQNHNNKSVNESLNNLFITEEDYQALRTSIDAYDNFDNISLAQRLE
KHELIEFRRIAAYLFKGNNRWKQSVELCKKDSLYKDAMQYASESKDTELAEELLQWFLQE
EKRECFGACLFTCYDLLRPDVVLETAWRHNIMDFAMPYFIQVMKEYLTKVDKLDASESLR
KEEEQATETQPIVYGQPQLMLTAGPSVAVPPQAPFGYGYTAPPYGQPQPGFGYSM
NT seq
5028 nt
NT seq
+upstream
nt +downstream
nt
atggcccagattctgccaattcgttttcaggagcatctccagctccagaacctgggtata
aatccagcaaacattggcttcagtaccctgactatggagtcagacaaattcatctgcatt
agagagaaagtaggagagcaggcccaggtggtaatcattgatatgaatgacccaagtaat
ccaattcgaagaccaatttcagcagacagtgccatcatgaatccagcaagcaaagtaatt
gcgctaaaagctgggaaaactcttcagatatttaacattgaaatgaaaagtaaaatgaag
gcacataccatgactgatgacgtcaccttttggaagtggatctcattgaatacagttgct
cttgtgacggataatgcagtttatcattggagtatggaaggagagtctcagccagtgaaa
atgtttgaccgccattccagccttgcgggatgccagattatcaattatcgtacagatgca
aaacaaaagtggttacttctaactggtatatctgcacagcaaaatcgtgtggtgggagcg
atgcaattatattcagtggataggaaagtgtctcagcccattgaaggacacgcagccagt
tttgcacaatttaagatggaaggaaatgcagaagaatcaacattgttttgttttgcagtc
cggggtcaagctggaggaaagttacatattattgaagttggcacaccacctacagggaac
cagccttttccaaagaaggcagtggatgttttctttcctccagaagcacaaaatgacttt
cccgttgcaatgcagataagtgagaagcatgatgtagtattcttgattactaagtatggt
tacatccacctctatgatcttgagactggaacctgcatctacatgaatagaatcagtgga
gaaacaatctttgttactgcacctcatgaagccacagctggaataattggagtaaacagg
aagggacaagttctgtctgtgtgtgtggaagaagaaaacataattccttatatcactaat
gtcttacaaaatcctgatttggctctgagaatggctgtacgtaacaacttagctggagct
gaagaactctttgcccggaaatttaatgctctctttgcccagggaaattactcagaggca
gcaaaggtggctgctaatgccccgaagggaatccttcgtaccccagataccatccgtcgg
ttccagagtgtcccagcccagccaggtcaaacttctcctttacttcagtactttggaatc
cttttggaccagggccaattaaacaaatatgaatctttggaactgtgtaggcctgtactt
cagcaagggcggaaacaacttttggaaaaatggctaaaagaagacaagctggagtgttct
gaagaactcggtgaccttgtgaaatctgtggaccctacactggcacttagtgtataccta
cgggctaatgtcccaaataaagtcattcagtgttttgcagaaacaggtcaagtccagaag
attgttttatatgctaaaaaagttggatatactccagactggatctttctgctgagaaat
gtcatgcggatcagcccagatcaaggacagcagtttgctcaaatgttagttcaggatgaa
gaacctcttgctgatatcactcagattgtggatgtcttcatggaatacaatctaattcag
cagtgtactgcattcttgcttgatgctttgaagaacaatcgcccatctgaaggtccttta
cagacacggttgcttgagatgaatcttatgcatgcacctcaagttgcagatgctattcta
gggaaccagatgttcacccattatgaccgagctcacattgctcagctgtgtgagaaggct
ggtcttctgcagcgtgcattggaacacttcactgatctatatgatataaagcgtgcagtt
gttcatacccatcttcttaacccagagtggcttgtgaattactttgggtccttatcagta
gaagactccctggaatgcctcagggccatgctttctgccaatattcgtcagaatctacag
atttgtgttcaagtggcttctaaatatcatgaacaactgtcaactcagtctctgattgaa
ctttttgaatctttcaagagttttgaaggtctcttttattttctgggatccattgttaac
tttagtcaggacccagatgtgcactttaaatatattcaggcagcttgcaagactgggcag
atcaaagaagtagaaagaatctgtagagaaagcaactgctatgatcctgagcgagtcaag
aattttctcaaggaagcaaagctaacagatcaactgccacttatcattgtgtgtgaccga
tttgacttcgttcatgatttggtgctctatttatatagaaataatctccagaagtatata
gagatatatgtacagaaggtgaatcccagtcgacttcctgtggttattggtggattactt
gatgttgattgttctgaagatgtcatcaaaaatttgattcttgttgtaagaggtcaattc
tctactgatgagcttgttgcagaagttgaaaagagaaacagactgaaactgcttctgcct
tggctagaggccagaattcatgagggctgtgaggaacctgctactcacaatgcattagcc
aaaatttacatagatagtaataacaacccagagagatttcttcgagaaaatccttattat
gacagccgtgttgttggaaagtattgtgaaaaaagagatccacatctggcctgtgttgct
tatgaacgtggccagtgtgatctggaacttatcaatgtttgcaatgagaattccctcttc
aaaagtctttctcgctatctggtccgccgaaaggatccagaattgtggggtagtgtgcta
ctggaaagcaatccctacaggaggccccttattgaccaggttgtacagacagccttgtct
gagacacaagaccctgaagaagtatcagtgactgtcaaagcttttatgactgcagatctg
cctaatgaactcattgaactgctagagaaaattgtccttgataactctgtttttagtgaa
cacaggaatcttcaaaacctcctcatcctcacggcaattaaggctgaccgtacacgtgtt
atggaatatattaaccgcctagataattatgatgccccagatattgctaatattgccatc
agcaatgagctctttgaagaagcatttgctattttccggaaatttgatgtcaatacttca
gcagtgcaggtcttgattgaacatattgggaatttggatcgggcatatgaatttgctgaa
cgatgcaatgaacctgcagtctggagtcagcttgcaaaagcccagctccagaaaggcatg
gtgaaagaagccattgattcttatatcaaagcagatgatccttcatcctacatggaagtt
gttcaggctgccaatacaagtggaaactgggaagaactggtgaagtacttgcagatggcc
cgtaagaaggctcgagaatcctatgtggagacagaattgatatttgcactggccaaaaca
aaccgccttgcagagttagaagaattcatcaatgggccaaataatgctcatatccagcaa
gttggagaccgttgttatgatgaaaaaatgtatgatgctgctaagttattatacaataat
gtttccaattttggacgcttggcatctaccctggttcacctgggtgaatatcaggcagct
gttgatggagctaggaaagctaatagtacacgaacatggaaagaggtctgctttgcttgt
gtagatggaaaagagtttcgtcttgctcagatgtgtggacttcatattgtagtacatgca
gatgaattggaagaactcatcaactactatcaggatcgtggatattttgaagaacttatt
accatgttggaagcagcattgggacttgagcgtgcacacatgggaatgtttaccgaatta
gctattttatattctaaattcaagccacagaaaatgagagagcatctggaactgttctgg
tcaagagtgaatattcctaaggtgctaagagctgcagaacaagctcatctctgggcagaa
ttggtgtttttgtatgacaaatatgaagagtatgataatgccatcattactatgatgaat
catccaactgatgcatggaaagaaggacagttcaaagatatcattaccaaggttgccaat
gtggaactatactacagggcaatacagttctacttagaattcaagcctcttttgttaaat
gatttgctgatggtgctgtctccacggttggaccatactcgtgcagtcaattatttcagc
aaggttaaacagctaccattggtgaaaccatacttgcgttcagttcagaatcacaacaac
aaatctgtgaatgaatcactgaacaacctctttattacagaagaagactatcaggctctg
cgaacatcaatagatgcttacgacaactttgacaacatctcgcttgctcagcgtttggaa
aaacatgagctcattgaattcagaagaattgctgcttatctcttcaaaggcaacaatcgc
tggaaacagagtgtagaactgtgcaagaaagatagcctgtataaggatgcaatgcagtat
gcctctgaatcaaaagacactgaattggctgaagaactactacagtggtttttgcaggaa
gaaaaaagagaatgcttcggagcttgtctctttacctgttacgatcttttaaggccagat
gtcgtcttggaaactgcctggaggcacaatatcatggattttgcaatgccctatttcatc
caggtcatgaaggaatatttgacaaaggtggataaattagatgcttcagaatcactgaga
aaagaagaagaacaggctacagagacgcaacctattgtttatggtcagccccaattgatg
ctgacagcaggacccagtgttgcagtccctccccaggcaccttttggctatggttatact
gcaccgccctatgggcagccacagcctggctttgggtacagcatgtga
DBGET
integrated database retrieval system
