Sorex araneus (European shrew): 101555818
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Entry
101555818 CDS
T07854
Symbol
PCDH19
Name
(RefSeq) protocadherin-19 isoform X1
KO
K16499
protocadherin delta 2
Organism
sara
Sorex araneus (European shrew)
Brite
KEGG Orthology (KO) [BR:
sara00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sara04515
]
101555818 (PCDH19)
Cell adhesion molecules [BR:
sara04515
]
Cadherins
Protocadherins
101555818 (PCDH19)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Motif
Other DBs
NCBI-GeneID:
101555818
NCBI-ProteinID:
XP_004611703
LinkDB
All DBs
Position
Unknown
AA seq
1099 aa
AA seq
DB search
MESLLLPVLLLLAILWTQAAALINLKYSVEEEQRAGTVIANVAKDARDAGFAMDPRQASA
FRVVSNSAPHLVDINPSSGLLVTKQKIDRDLLCRQSPKCIISLEVMSSSMEICVIKVEIK
DLNDNAPSFPAGQIELEISEAASPGTRIPLDSAYDPDSGSFGVQTYELTPNELFGLEIKT
RGDGSRFAELVVEKSLDRETQSHYNFRITALDGGDPPHMGTVGLSIKVTDSNDNNPVFGQ
SNYAVSVPENSPPNTPVIRLNASDPDEGTNGQVVYSFYGYVNDRTRELFQIDPHSGLVTV
IGALDYEEGHVYELDVQAKDLGPNSIPAHCKVTVSVLDTNDNPPVINLLSVNSELVEVSE
SAPPGYVIALVRVSDRDTGLNGRVQCRLLGNVPFRLQEYESFSTILVDGRLDREQHEQYN
LTIQARDGGVPMLQSAKSFTVRITDENDNHPHFSKPYYQVIVQENNTPGAYLLSVSARDP
DLGLNGSVSYQIVPSQVRDMPVFTYVSINPNSGDIYALRSFNHEQTKAFEFKVLAKDGGL
PSLQSNATVRVIILDVNDNTPVITAPPLINGTAEVYIPRNSGIGYLVTVVKAEDYDEGEN
GRVTYDMTDGDRGFFEIDKVNGEVRTTRTFNENSKASYELIVVAHDHGKTSLSASALVVV
YLSPALDAQESMGSVNLSLIFIIALGSIAGILFVTMIFVAIKCKRDNKEIRTYNCRIAEY
SYGHQKKSSKKKKISKNDIRLVPRDVEETDKMNVVSCSSLTSSLNYFDYHQQTLPLGCRR
SESTFLNVENQNTRNTTSASHIYHHSFNSQGPQQPDLIINGVPLPENENFSFDSNYVNSR
AHLIKSSSTFKDLEGNSLKDSGHEESDQTDSEHDVQRSLYCDTAVNDVLNASVTSMGSQM
PDHDQNEGFHCREECRILGHSDRCWMPRNTMTTRSKSPEHVRNVIALSIEAAAADAEAYD
DCGPTKRTFATFGKDVVDHVAEERPTLKGRKTVEVTICSPKVSGVIREAGNGCEAISPVT
SPLHLKSSVPAKPSISFTVALAPMGRDVEQYANNGASRPSEAEPRGADSEKVVCEVIPIM
KEGRDKESPGVKHLKDIVL
NT seq
3300 nt
NT seq
+upstream
nt +downstream
nt
atggagtcactcctgctgccggtgctgctgctgctggccatcttatggacgcaggctgct
gccctcattaaccttaagtactctgtagaagaggagcagcgtgccgggacagtgatcgct
aacgtggccaaggacgcgcgggatgctggctttgctatggacccacgacaagcctccgcc
ttccgtgtggtatcgaactcagccccgcacttggtggacatcaaccccagctcgggcctg
ctggtcaccaaacagaagatcgaccgcgacctactgtgccgccagagccccaagtgtatc
atctcgctggaagtcatgtccagctcaatggaaatctgcgtgattaaggtggagatcaaa
gacctaaacgacaatgctcccagcttcccggcgggacagatagagctggagatctcagag
gcagccagccctggcacgcgcatccctctggacagtgcctacgacccggactctggcagt
ttcggtgtgcagacctacgagctcacgcctaatgagctcttcggcctggagataaagacg
cgtggtgacggctcacgctttgctgaactcgtggtggaaaagagcctggatcgagagact
caatcgcactacaactttcgcatcaccgcactcgacgggggcgatccgcctcacatgggc
acggttggcctcagcattaaggtgactgactccaatgacaacaatccggtgttcggccag
tccaattatgctgtcagcgtgccagagaattcgcctcctaatactcctgtcatccgcctc
aatgccagcgacccagacgagggcaccaatggccaggtggtctactcattttatggctat
gtcaacgaccgcacccgcgagctctttcagattgatcctcatagcggcctggttacggtt
atcggtgccctggactatgaggagggccacgtgtatgaattagacgtgcaagccaaggac
ttgggacctaattccattcctgcacactgcaaggtcacggtcagcgttcttgataccaac
gataacccgccggttatcaacttgttatccgtcaacagtgagctggtggaggtgagcgag
agcgcccccccgggttacgtgatcgccctcgtgcgggtttcggatcgcgacaccggcctc
aatgggcgcgttcagtgccgcttgctgggcaacgtgccctttcggctacaggagtatgag
agcttctccactatcctggtagacggacgactggaccgggagcagcacgaacagtacaac
cttacaatccaggcgcgcgatggcggcgtgcccatgctgcagagtgccaagtctttcact
gtgcgcatcaccgatgagaacgacaaccatccgcacttttccaagccctactaccaagta
attgtgcaggagaacaatactcccggcgcatacctgctgtccgtgtcagctcgagaccct
gacctgggtctcaatggcagtgtttcctatcagatcgtgccatcgcaggtgcgggacatg
cctgtcttcacctatgtctccatcaatcccaactcaggggacatttacgcactgcgatct
ttcaaccacgaacagaccaaggcattcgaattcaaggtgctggccaaggacggaggcctg
ccctcactacagagcaatgcaaccgttcgagtcatcatcctcgatgtcaatgacaatact
ccggtcatcacggcccctcctctaattaacggcaccgctgaagtctacattcctcgaaat
tcaggcataggctacctggtgactgttgttaaagccgaggactatgatgaaggtgaaaat
ggtcgggtcacctatgacatgactgatggggacagaggcttctttgaaatagataaggtc
aacggggaagtcagaaccactcgcaccttcaatgagaattccaaggcttcctatgagctt
attgtggtagcccacgaccacggcaagacatctctttccgcctctgcactcgtcgtagtc
tacttgtcccctgctctggatgcccaggagtctatgggttccgtcaacttgtccctgatc
ttcattatagccctgggctccattgcggggatcctctttgtcacgatgatcttcgtagca
atcaagtgcaagagagataacaaagagatcaggacctacaactgcagaatcgccgagtac
tcctatggccatcaaaagaaatcaagcaagaagaaaaaaatcagtaagaatgacatacgc
ctcgtacccagggatgtggaggagacagacaagatgaacgttgtcagttgttcctctctg
acctcatccctcaactatttcgactaccaccagcagacgctgcccctgggctgccgccgc
tctgagagcactttcctgaatgtggagaaccagaatacccgtaataccaccagtgccagc
cacatctatcatcattctttcaacagccagggcccccagcagccagacttgattatcaat
ggcgtccctctgcctgagaatgaaaacttctcctttgattccaactatgtgaacagtcga
gcccacttaatcaagagcagctccacctttaaggatttagagggcaacagcctgaaggac
agtgggcatgaggaaagcgaccagactgacagtgaacatgatgtccagagaagcctgtat
tgcgatactgctgtgaatgatgtcctgaatgctagtgtgacttctatgggatcccagatg
cctgaccatgatcagaatgaaggatttcactgccgggaagagtgccggattcttgggcac
tccgatcggtgctggatgcctcgaaacaccatgaccacccgctccaagtcccctgagcac
gtgaggaatgtcatcgcactgtccattgaagctgctgctgcagatgctgaagcctatgat
gactgcggccccaccaagaggacctttgcaacctttgggaaagatgtcgttgatcacgtg
gctgaggaaaggcctaccctgaaaggccggaagactgttgaagtcaccatttgcagccct
aaggtcagtggtgtgatccgggaggcaggcaatggctgtgaggctattagccctgtcacc
tcccctctgcacctcaagagctctgtgcctgccaagccttcaatatctttcaccgttgct
ctggcacccatgggccgagatgtagagcagtatgccaacaacggcgcgtctcgtccctct
gaagctgagccccgtggagccgacagtgagaaagttgtgtgtgaagtcattcctattatg
aaggagggtcgtgacaaggagtctcctggagtaaagcatctgaaagatattgtactctaa
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integrated database retrieval system
