KEGG   Sorex araneus (European shrew): 101555835
Entry
101555835         CDS       T07854                                 
Symbol
SF3A1
Name
(RefSeq) splicing factor 3A subunit 1
  KO
K12825  splicing factor 3A subunit 1
Organism
sara  Sorex araneus (European shrew)
Pathway
sara03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sara00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    101555835 (SF3A1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:sara03041]
    101555835 (SF3A1)
Spliceosome [BR:sara03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    101555835 (SF3A1)
 Complex B
    101555835 (SF3A1)
 Complex C
   U2 SnRNP specific factors
    101555835 (SF3A1)
SSDB
Motif
Pfam: PRP21_like_P Surp ubiquitin Ubiquitin_2 Rad60-SLD
Other DBs
NCBI-GeneID: 101555835
NCBI-ProteinID: XP_004615602
LinkDB
Position
Unknown
AA seq 793 aa
MPAGPVQAVPPPPPAAAEPKQPTEEDASSKEDSTPSKPVVGIIYPPPEVRNIVDKTASFV
ARNGPEFEARIRQNEINNPKFNFLNPNDPYHAYYRHKVSEFKEGKAQEPSAAIPKVMQQQ
QQAAQQQLPQKVQAQVIQETIVPKEPPPEFEFIADPPSISAFDLDVVKLTAQFVARNGRQ
FLTQLMQKEQRNYQFDFLRPQHSLFNYFTKLVEQYTKILIPPKGLFTKLKKEAENPREVL
DQVCYRVEWAKFQERERKKEEEEKEKERVAYAQIDWHDFVVVETVDFQPNEQGNFPPPTT
PEELGARILIQERYEKFGESEEVEMEVESDEEDEKQEKTEEPPSQLDQDTQVQDMDEGSD
DEDEGQKVPPPPDTPMPPPLPPTPDQVIVRKDYDPKASKPLPPAPAPDEYLVSPITGEKI
PASKMQEHMRIGLLDPRWLEQRDRSIREKQSDDEVYAPGLDIESSLKQLAERRTDIFGVE
ETAIGKKIGEEEIQKPEEKVTWDGHSGSMARTQQAAQANITLQEQIEAIHKAKGLVPEDD
TKEKIGPSKPNEIPQQPPPPSSATNIPSSAPPITSVPRPPAMPPPVRTTVVSAVPVMPRP
PMASVVRLPPGSVIAPMPPIIHAPRINVVPMPPSAPPIMAPRPPPMIVPTAFVPAPPVAP
VPAPAPMPPVHPPPPMEDEPTSKKLKTEDSLMPEEEFLRRNKGPVSIKVQVPNMQDKTEW
KLNGQVLVFTLPLTDQVSVIKVKIHEATGMPAGKQKLQYEGIFIKDSNSLAYYNMANGAV
IHLALKERGGRKK
NT seq 2382 nt   +upstreamnt  +downstreamnt
atgccggccggacccgtgcaggcggtgcccccgccgccgcccgcggccgccgagcccaaa
cagcccaccgaagaagatgcctcttcaaaggaggattctaccccttccaagccagtggtg
gggattatttaccctcctccggaggtcaggaatattgtggacaagaccgccagctttgtg
gccagaaatggacctgaatttgaagcccggattcgacagaacgagatcaacaaccccaag
ttcaacttcctgaaccccaatgatccttaccatgcctactaccgccacaaggtcagcgag
ttcaaggaggggaaggctcaggagccctcggccgccatcccgaaggtcatgcagcagcag
cagcaggccgcacagcagcagctcccccagaaggtccaggcccaggtgatccaagagacc
atcgtgcccaaagagccccctccggagttcgagttcattgcagatcccccgtccatctct
gccttcgacctggatgtggtcaagctcacagctcagttcgtggcccggaatggacgtcag
ttcctgacccagctgatgcagaaagagcagcgcaactaccagttcgacttcctccgcccc
cagcacagccttttcaactacttcaccaagctggtagaacagtataccaagatcttgatc
ccacccaagggtttatttacaaagctcaagaaagaggcagagaacccccgagaagttctg
gatcaggtgtgctaccgagtggagtgggccaagttccaggagcgtgagcggaagaaggaa
gaggaggaaaaggagaaggaacgggtggcctatgcacagattgactggcacgattttgtg
gtggtcgaaacggtggatttccaacccaacgagcaagggaacttccctccccccaccacc
ccagaggagcttggagcacgaatcctcattcaggagcgttacgagaagtttggggagagt
gaggaggtcgagatggaggttgaatctgatgaggaagatgagaaacaggagaagactgag
gagccgccttctcagctggaccaggacacccaagtccaagacatggatgagggttcagat
gatgaagacgaagggcagaaagtgcccccacccccagacacacccatgcccccgcctctg
cccccaactccagaccaggtcattgtcaggaaggactatgaccccaaagcctccaagccc
ctgcctccagccccagctccagatgagtatctggtgtcccctatcacgggggagaagatc
cctgccagcaaaatgcaggaacacatgcgcattgggcttctcgacccccgctggctggag
cagcgagatcgttccatccgagagaagcagagtgatgatgaggtgtatgcaccaggtctg
gatattgagagtagcttgaagcagttggctgagcgtcgtaccgacatcttcggtgtggaa
gaaactgccatcggtaagaagattggcgaggaggagatccagaagcccgaagaaaaggtg
acctgggatggccactcaggcagcatggcccgtacccagcaggctgcccaggccaatatt
accctccaggagcagatcgaggctatccataaggccaaaggcctggtgccggaagatgac
accaaagagaagatcggccccagcaagcccaacgaaatcccccagcagcctcccccgccg
tcttctgctaccaacatccccagctcggccccacccatcacctcggtgccccggccgccc
gcaatgccgccccccgttcgtaccacagtcgtgtctgcagtgcctgtcatgcctcggccc
ccgatggcctctgtggtccgattgcccccaggctcggtgattgcccccatgccacccatc
atccatgcacccaggatcaatgtggtacccatgccgccctcggcacctcccatcatggca
cctcgcccacctcccatgatcgtaccaacagcctttgtgcctgctccacccgtggctcct
gtccctgccccagccccaatgcctcctgtccaccctccaccgcccatggaagatgaacca
acctccaagaagctgaagacagaggacagcctcatgcccgaggaagagttcctgcgcaga
aataagggtccagtgtccatcaaagtccaggtgcccaacatgcaggataagacggaatgg
aaactgaatgggcaggtgctggtcttcacgctccctctcacggaccaggtttctgtcatc
aaggtcaagattcacgaagccactggcatgcctgccggcaaacagaagctgcagtatgag
ggcatattcatcaaggattccaactcactagcctactacaacatggctaatggcgctgtc
atccacctggccctcaaggagagaggcgggaggaagaagtag

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