Sorex araneus (European shrew): 101555975
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Entry
101555975 CDS
T07854
Symbol
SPATA13
Name
(RefSeq) spermatogenesis-associated protein 13
KO
K05769
Rho guanine nucleotide exchange factor 4/29
Organism
sara
Sorex araneus (European shrew)
Pathway
sara04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
sara00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
101555975 (SPATA13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sara04131
]
101555975 (SPATA13)
Membrane trafficking [BR:
sara04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
101555975 (SPATA13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
SH3_1
PH
SH3_9
SH3_2
Motif
Other DBs
NCBI-GeneID:
101555975
NCBI-ProteinID:
XP_012787268
LinkDB
All DBs
Position
Unknown
AA seq
1237 aa
AA seq
DB search
MGRSLESRDAPPRLPSCRGHRFTERGSCEVRERSELRGPGWALGGGDFWDLPSSEAPPNG
SRASRGRPPVGAGRGRLQRDAPGVARKMSSLSRIAGGGQRSEEPLPRERRPFPSRGAPGL
QGESGANGPAPLTGTVFGGGTCLWDLVWALPRAEEPEPDARSSWRASQAAAPPKAEDSED
GESSWGPAPDAPASPESMSAAPQGGGGRAAAGPGPGPAPTCENGGCGAADAREARPSAAK
LLRLLSGGRPRLPGAERPRSVVLVRSASTWTALASLRKAGSFKRLKASVLQGIQSRGEGA
RGRSGGSERSTKRWKSPARVLRLVSGAAEGAWRRETAREPPPKPRPRSALHDDYSRRASA
GSEQARRGRSASLHSVYAAVDFGSMPVVDVDTAVFPLEPTLPTASGPGAGGAASSSAAGE
DAQKPGRPAPGDPEHLVSPSRPATPKPRSPQSPCAGSPCSVSSRSLSAVAGEDGAQGPAP
LRDPASSRSDDGVLDSAGSHAPSSPRAEGREEVVAEESCRRDPPQEDDTTEPQKTSRRRW
GSGRRSRPRPLSDYGHLVSRSLSIPEDAIAGDPQQEASMTGDPQPGMASGDPAGPSVGSG
CPRGSRRRRPISVIGGVSFYGQRRTEEIENLLTQPAARPPVPAHQVPPYKAVSARFRPFT
FSQSTPIGLDRVGRRRQMRASNVASDGGAESSALVDDNGSEEDDSYEDLRQGNSRFLPPG
GEQLAVNELISDGSMVCAEALWDHVTMDDQELGFKAGDVIQVLEASNKDWWWGRNEEKEA
WFPASFVRLRVNQEELSDHSSSSQGEEQQVGSRGRHTHPESKRQMRANVVQEIMNTERVY
IKHLRDICEGYIRQCRKHTGMFTVAQLSTIFGNIEDIYKFQRKFLKDLEKQYNKETPHLS
ELGSCFLQHQEGFSVYSEYCNNHPRACAELAGLMKQGRYRHFFEACRLLQQMIDIAIDGF
LLTPVQKICKYPLQLAELLKYTPQEHSDYSNIKAAYEAMKNVACLINERKRKLESIDKIA
QWQVSIVGWEGLDILDRSSELIHSGELTKITKQGKSQQRTFFLFDHQLVSCKKDVLRRDM
LYYRGRTDTDQMQLVDLEDGRDKDWNLSVKNAFKLISRTTDEAHLFCARKLEDKARWLQA
FEDERRRVQEDQEMGMEISENQKKLAMLNAQKAGHGKSKGYGGCPVAPPHQNLHPLQQRH
VTVPPSVPQQQVFALAEPRRKPSLLRFNLSKLAPFRK
NT seq
3714 nt
NT seq
+upstream
nt +downstream
nt
atggggcggagcctggagagccgggacgcgccgccgcgtctccccagctgccgcggccac
cgctttacggagcgtggctcctgtgaggtccgggagcgctccgagctccgcgggccgggg
tgggcactgggtggcggggacttctgggacctgccgtcttcggaggctccgccgaatggg
agccgcgcgagccggggccgcccacctgtgggagccggccggggccgcctccagcgcgac
gcgcccggggtcgcccggaaaatgtcctcgctctcccggatcgcgggcggcggacaaagg
tcggaggagccgctgccccgggagcggagacctttccccagtcgcggggctcctggactg
cagggggaatctggcgccaacggccctgcccccctcacggggacagtgttcggcggtggg
acctgtctgtgggacttggtctgggcgctgccccgcgccgaggagccggagccggatgcg
cgcagcagctggcgtgcgagccaggcggccgcgcccccaaaggccgaggacagcgaggac
ggcgagagcagctgggggccggcgccggacgcgcccgcgagcccggagagcatgagtgcg
gccccgcagggcggcggagggcgggctgcggcggggcccggcccggggcccgccccgacg
tgtgagaacggaggctgcggcgcggcggacgcccgggaagcgcggcccagcgcggccaag
ctgctgcgcctgttgtcggggggccgcccgcggctgccgggcgcagagaggccccgctcc
gtggtgctggtgcgcagcgcgtccacctggacggcgctcgcgtccctccgcaaggcgggc
tcgttcaagcggctcaaggcgtccgtgctgcagggcatccagagccggggcgagggcgcg
cgcgggcgctcggggggctcggagagaagcaccaagcgctggaagagcccggcgcgcgtc
ctgaggctggtgagcggcgcggccgagggcgcctggcggagggagacggcccgggagccc
ccgccgaagccccggccccgcagcgcgctgcacgacgattattcccggcgcgcgtcggcg
ggcagcgagcaggcgcgcaggggccgttcggcgtccctgcacagcgtgtacgcagccgtg
gacttcgggtccatgcccgtggtggacgtggacacggcggtgttccccctcgagcccaca
ctccccacggcatccggaccgggagccggtggggccgcgtccagctcggctgcgggggaa
gatgcccagaaacccggccgcccggctccgggggaccctgagcacctggtctccccgtcc
aggcccgccacgcccaagccccgcagtccgcagagcccgtgtgctgggagtccctgcagt
gtcagctcgcggtccctgagcgctgtggctggtgaagacggagcccaggggcccgcaccc
ctccgggatcctgcatccagcaggagcgacgacggcgttctggacagtgcgggcagccac
gccccatcgagccccagggcggaagggagagaagaggtcgtggctgaggaatcgtgcagg
cgggaccctccccaagaggacgacaccacggagcctcagaagaccagccggcggagatgg
ggctcagggagaaggtccagaccccggccgctgtccgactacggccacttggtcagccgc
agtttgtctattcctgaagatgcaatcgccggagacccccagcaggaggccagtatgacc
ggcgacccgcagccaggcatggcctccggggaccctgcagggccgagtgtgggctcgggc
tgccccagaggaagccggagaagacgccccatctctgtgataggcggggtcagcttctat
ggccagaggcggactgaggaaatagagaatcttctgacccaaccagcagccaggccgccc
gtgcccgctcaccaggtgcccccctataaagctgtctcagcccgcttccggccgttcacc
ttctcccagagcaccccaattggcctggaccgcgtgggacggcggcgacagatgcgtgca
tccaatgtggcctcggatggaggcgctgagtcctctgccctggtggacgacaacggcagt
gaggaggatgacagctatgaggacctccggcagggtaactcccgattcctgccacccggc
ggggagcagctggcggtcaacgagctgatcagtgatggcagcatggtctgcgcagaagcc
ctgtgggaccacgtgaccatggacgaccaggaactgggcttcaaggcgggagacgttatc
caggttctggaagcttccaacaaggactggtggtggggccggaatgaggagaaggaggcc
tggttcccagctagcttcgtcagactgcgagtgaaccaggaggagctgtcggaccactcg
agcagctcccagggcgaagagcagcaggtgggcagcaggggccgccacacgcaccccgag
agcaagcggcagatgcgtgccaacgtggtgcaggagatcatgaacaccgagcgcgtgtat
atcaagcacctcagggacatctgcgagggctacattcggcagtgtcgcaagcacacagga
atgttcaccgtggcacagctctccaccattttcggaaacatcgaagatatttacaagttc
cagagaaagttcttgaaagaccttgagaaacagtacaacaaagagacgcctcatctgagt
gagctggggtcctgcttcctgcagcaccaagagggcttctccgtctactctgagtactgc
aacaaccacccgcgtgcctgcgccgagctggccggcctcatgaagcagggccgctaccga
cacttctttgaggcctgccgcctgctccagcagatgattgacatcgccattgatggcttc
ctgctcacacctgtgcagaagatctgcaagtacccgctgcagctggctgagctgctcaag
tacacgccacaggaacacagtgattacagcaatataaaggcagcatacgaggccatgaag
aatgtagcctgcctgatcaatgagcggaaacgcaagctggagagcatagacaagatagca
cagtggcaggtgtccatcgtgggctgggaggggctggatatcttggaccgaagctcagaa
ctgatccactctggagagctgaccaaaatcactaagcaaggcaagagccagcagcggacc
ttcttcttatttgaccaccagctggtgtcctgcaagaaggacgtgctgcgccgggacatg
ctctactacaggggccgcaccgacacggaccaaatgcagctggttgacctggaggatggg
cgcgacaaggactggaatctcagtgtgaagaacgccttcaagctcatcagcaggaccact
gatgaggcacatctgttctgtgccaggaagctggaagacaaggcccggtggctgcaggcc
tttgaggacgagcggaggagggtgcaggaggaccaggagatgggaatggaaatttcagaa
aatcagaagaaactggcaatgttgaacgctcagaaggccggacatggcaagtctaaaggc
tatgggggatgcccggtggcccccccgcaccagaacctgcacccactgcaacagcgccac
gtcacggtgccgcccagcgtaccccagcagcaagtcttcgccctggccgagccccggcgg
aaaccatcactgctgaggttcaacctgagcaaactcgccccctttcgaaagtga
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