Sorex araneus (European shrew): 101556092
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Entry
101556092 CDS
T07854
Symbol
EXOSC2
Name
(RefSeq) exosome complex component RRP4 isoform X1
KO
K03679
exosome complex component RRP4
Organism
sara
Sorex araneus (European shrew)
Pathway
sara03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sara00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
101556092 (EXOSC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sara03019
]
101556092 (EXOSC2)
Messenger RNA biogenesis [BR:
sara03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
101556092 (EXOSC2)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
101556092 (EXOSC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRP4_S1
KH_6
ECR1_N
RRP40_S1
ECR1_N_2
EXOSC1
Motif
Other DBs
NCBI-GeneID:
101556092
NCBI-ProteinID:
XP_004613326
LinkDB
All DBs
Position
Unknown
AA seq
293 aa
AA seq
DB search
MAMEMRLPVARKPVGETLGRDTKKHLVVPGDTITTDTGFMRGHGTYMGEEKLIASVAGSV
ERVNKLICVKALKTRYNGEVGDIVVGRITEVQQKRWKVETNSRLDSVLLLSSMNLPGGEL
RRRSAEDELAMRGFLQEGDLISAEVQAVFSDGAVSLHTRSLKYGKLGQGVLVQVSPSLVK
RQKTHFHDLPCGASVILGNNGFIWIYPTPEHKDDEAGGFVANLEPVSLADREVISRLRNC
IVALVTQRMMLYDTSILYCFEASLPHQIKDILKPEVVEEIVMETRQRLLEQEG
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atggcgatggagatgcggctcccggtcgctcgcaagcctgttggcgagaccctgggccgc
gacaccaagaagcacctggtggtgccgggggacacgatcaccacggacaccggcttcatg
cggggccacgggacctacatgggggaggagaagctcatcgcatctgtggccggctccgtg
gagagagtgaacaagctcatctgtgtgaaggctctgaaaaccaggtacaacggcgaggtg
ggggacatcgtggtcgggcggatcaccgaggtccagcagaagaggtggaaggtggagacc
aactccaggctggattcggtcctgctcctgtcgtccatgaaccttcctggaggggagctg
aggcggcgatcagcggaggacgagctggccatgagaggcttcctgcaggaaggggacctc
atcagcgccgaggtccaggccgtgttctctgacggcgccgtctccctccacacgcggagc
ctgaagtacggaaagctgggccagggcgtcctggtgcaggtgtccccctccctggtgaag
aggcagaagactcacttccacgacctgccctgcggggcgtccgtcatcctgggcaacaac
ggcttcatctggatctaccccacgcccgagcacaaggacgacgaggcggggggcttcgtg
gccaacctggagcccgtctcgctcgccgaccgggaggtgatctcgcggctgcggaactgc
atcgtggcgctggtgacgcagaggatgatgctgtacgacaccagcatcctctactgcttc
gaggcgtctctgccgcatcagatcaaagacatcctcaagccggaagtggtggaggagatc
gtgatggagacgcgccagcggctgctggagcaggagggctag
DBGET
integrated database retrieval system
