Sorex araneus (European shrew): 101556101
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Entry
101556101 CDS
T07854
Symbol
HMHA1
Name
(RefSeq) minor histocompatibility protein HA-1
KO
K26415
Rho GTPase-activating protein 45
Organism
sara
Sorex araneus (European shrew)
Brite
KEGG Orthology (KO) [BR:
sara00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sara04131
]
101556101 (HMHA1)
Membrane trafficking [BR:
sara04131
]
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
101556101 (HMHA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGAP
GMIP-like_FCH
RHG29_45_N
C1_1
FCH
SH3BP5
PSD13_N
Motif
Other DBs
NCBI-GeneID:
101556101
NCBI-ProteinID:
XP_004614977
LinkDB
All DBs
Position
Unknown
AA seq
1110 aa
AA seq
DB search
MFSRKKRELIKTPSISKKNRAGSPSPQLAGELPRKEGPDVSSLGPGLDPPGTVSAAKATG
TLKRPTSLSRHASAAGFPLSGATSWALARGYRSPISAPSPSEPLAEGPGPEATEDVSHLL
ADVARFAEGLEKLKECVLRDDLLEARRPLAHECLGEALRVMRQVIAKYPLLSTVETLTAA
CNLIAKVKAFHYECNNESDKQEFEKALEAVAVTFSSTVSEFILGEVDSSTLLSVPPGDPS
QSMENLCGQGADSTPTGTEDWEPGCPPPEEVDMLLQRCEGGVDAALQYSKSMAKYMKDLI
GYLEKRTVLEMEFAKGLQKIVQNCRQGITQEPHMPLLSIYSLALEQDLEFGHGLVQAVST
LQTQTFIQPLNLRRLEHEKRRKEIKEMWHRAQRKLQEAESNLRKAKQGYVQRCEDHDKAR
SLVAKAEEEQAGSGPGAGGTVSKALDKRRRLEEEAKNKAEEAMATYRTCVADAKTQKQEL
EDTKVTVLRQIQEVIRQSDQTIKSVTISYYQMMQMQTAPLPVHFQMLYESSKLYDPGQQY
ASHVRQLQRGEEPYVHYDFEPHIPTNAWSPVMHVRKDSFSGGDAVGAEAAGTPPEEAVLA
KEPRSERGHKVHKSRPSSISDPESGLDPSTGSGDFKKFERTSSSGTMSSSEELAEQEGGP
GAATFEQEDLSAMAPELPVAVPSGPFRHVGLSKAARTHRLRKLRTPAKCRECNSYVYFQG
AECEECCLACHKKCLETLAIQCGHKKLQGRLQLFGQDFGQAARSTSDGVPFIIKKCICEI
ERRALHTKGIYRVNGVKTRVEKLCQAFENGKELVELSQAPPHDISNVLKLYLRQLPEPLI
SFRFYHELVGLAKDSLKAEAELKAASRGRLDAAESEAAAVAMASRLRELLRDLPHENRAT
LQYLLRHLRRIVEVEQDNKMTPGNLGIVFGPTLLRPRPTEATVSLSSLVDYPHQARVVET
LIAHYGLVFEEEPEEVPAGPDGAASQRAEVVVQVSYPESSEEAEDGGQESRVASNDSDSE
LDETPDPLDSSVDSALQHLSFLETRAGAEVGDGEASLGGLGAERGPWEGLSAYNSNQSNN
KPRPARLPAVRVRGGRVAVAGGLDRQPQFV
NT seq
3333 nt
NT seq
+upstream
nt +downstream
nt
atgttctccaggaagaagcgggagctcataaaaaccccttccatctcgaaaaagaaccgg
gcgggaagccccagcccgcagctcgccggggagctgcctcggaaggaggggccggatgtg
tcgtccctgggacctggtctggaccctccaggcaccgtctctgctgccaaggccacgggc
accctcaagcggcccacgagtctcagccgccatgccagcgcggccggcttcccgctgtcc
ggtgccacttcctgggcgctagcccggggttaccgcagccccatctcggctcccagcccg
tcggagcccctggccgagggccctggccctgaggccacggaggacgtctcccacctgctg
gccgacgtggctcgctttgccgagggcctggaaaagctcaaggagtgtgtcctgcgcgat
gacctcctggaggcccgccggcccctggcccatgagtgcctaggtgaggctctccgggtg
atgcgccaggtgatagccaagtacccgctgctgagcacggtggagacgctgacagctgcc
tgcaatctcatcgccaaggtcaaagctttccattacgagtgcaacaatgaatcggacaag
caggagtttgagaaggcactggaggctgtggctgtcaccttcagcagcaccgtgtccgag
ttcatcttgggtgaagtggacagtagcaccctcctgtcggtccctcctggggaccccagc
cagtccatggagaacctttgcggacagggggccgacagcaccccaacgggcacggaggac
tgggaaccaggctgcccgcccccggaagaggtggatatgctgctgcagcgctgtgagggc
ggcgtggacgcggcgctgcagtactccaagagcatggccaagtacatgaaggatctcatt
ggctacctggaaaagcgcactgtgcttgagatggagtttgccaaaggcctgcagaagatc
gttcaaaactgccgacagggcatcacgcaggagccccacatgccgcttctgtccatctac
tcgctggcccttgagcaggacctggagtttggccacggcctggtgcaggcggtgagcacg
ctacaaacacagacttttatccagcccttgaacctgcggaggctggaacacgaaaagcgc
aggaaggagattaaggagatgtggcaccgtgcccagaggaagctgcaagaggcggagtcg
aatctgcgcaaggccaaacagggctacgtgcagcgctgcgaggaccatgacaaagctcgc
tccttggtggccaaggcggaggaggaacaggctggctctgggcccggggccggtggcacc
gtctcaaaggccttggacaagcggcggcgcctggaggaggaggccaagaacaaggcagag
gaagccatggccacataccgcacctgcgtagctgatgccaagacacagaagcaggaactg
gaggacaccaaggtgacggtgctgcgacagatccaggaggtcatccgacagagtgaccag
accatcaagtcggtcaccatctcctactaccagatgatgcagatgcagacagcgccgctg
cccgtgcacttccagatgctgtatgagagcagcaagctgtacgacccgggccagcagtac
gcctcgcacgtgcgccagctgcagcgcggcgaagagccctacgtgcactacgacttcgaa
ccccacatccccaccaatgcctggtcgccagtcatgcacgtccgcaaagatagcttcagc
ggtggggatgctgtgggggccgaggcagcgggcaccccaccagaggaagcggtactggcc
aaggagcccagaagtgaacgcggccacaaggtacataagtctcggcccagctccatctca
gatccagagagtggactggaccccagcactggctcaggagactttaagaagttcgagcgc
acgtcgtccagtggtaccatgtcctccagcgaggagctggcagagcaggaaggtggtcct
ggggctgccaccttcgaacaggaggacctcagcgccatggcccccgagctgcccgtggcc
gtgcccagcggtcccttccgccacgtgggtctgtccaaggcggcgcgcacgcaccggctc
cgcaagctgcgcacacccgccaagtgccgggagtgtaacagctacgtctacttccagggc
gcggagtgcgaggagtgctgcctggcctgccacaagaagtgtctggagactctggccatc
cagtgcggccacaagaaactgcagggccgcctgcagctcttcggccaagacttcggccag
gcagcccgcagcacctcggatggtgtgcccttcatcatcaagaagtgcatctgtgagatt
gagcggcgtgccctgcacactaagggcatctaccgggtcaacggggtgaagacccgtgtg
gagaagctgtgccaggcctttgagaacggcaaggaactggtggagctgtcacaggccccg
ccccacgacatcagcaatgtcctcaagctctacctgcgccagctgcccgagccgctcatt
tcattccgcttctaccacgagcttgtggggctggccaaggacagtctcaaggcggaagcc
gagctcaaggcggcttcccggggccggctggatgcggccgagagcgaggctgcagcggtg
gccatggccagccggctgcgggagctcctgcgggacctgccgcacgagaatcgcgccacg
ctacagtatcttctacgccatctgcgcaggattgtggaggtggagcaagacaacaagatg
acccccgggaatctgggcatcgtgtttggacccacactgctgcggccacgccccacagag
gccactgtgtccctctcatccctggtggattatccccaccaggcccgcgtcgtggagacc
ctcatcgcccattatggcctggtctttgaagaggagcccgaggaggtgcctgcgggccct
gacggggcagccagccagcgggcagaagtggtggtgcaggtgtcatacccagagtccagc
gaggaggctgaggatggaggtcaagaatctcgcgtcgcctccaacgactcagattcggaa
ctggacgagaccccggacccgctggactcctccgtggacagtgccctccagcacctcagc
ttcctggagacgcgggcaggcgcggaagtgggggacggcgaggcgtcgctcgggggcctg
ggggccgagcgcgggccctgggaagggctgtccgcgtacaactccaaccagtccaacaac
aagcctcggcccgcgaggctgcccgccgtgagggtgcgcgggggccgggtggccgtggcc
ggtggcctggacaggcagccacagtttgtctag
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