Sorex araneus (European shrew): 101556158
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Entry
101556158 CDS
T07854
Symbol
VPS41
Name
(RefSeq) vacuolar protein sorting-associated protein 41 homolog
KO
K20184
vacuolar protein sorting-associated protein 41
Organism
sara
Sorex araneus (European shrew)
Pathway
sara04140
Autophagy - animal
sara04148
Efferocytosis
sara05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
sara00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
101556158 (VPS41)
04148 Efferocytosis
101556158 (VPS41)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
101556158 (VPS41)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sara04131
]
101556158 (VPS41)
Membrane trafficking [BR:
sara04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
101556158 (VPS41)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_Vps41
Beta-prop_Vps41
zf-RING_Vps41
Clathrin
WD40_Prp19
WD40_CDC20-Fz
ANAPC4_WD40
zf_RING_Vps8_fungal
Beta-prop_EML_2
WD40_WDHD1_1st
Vps39_1
Beta-prop_HPS5
TPR_PEP5_VPS11
Beta-prop_RIG_2nd
RIG-I_C
zf_RING_Vps8
Beta-prop_WDR35_2nd
zf-RING_5
Beta-prop_IFT140_2nd
Motif
Other DBs
NCBI-GeneID:
101556158
NCBI-ProteinID:
XP_012787800
LinkDB
All DBs
Position
Unknown
AA seq
895 aa
AA seq
DB search
MPLCVRFFCCPGVGCLICRGAVHRPQAFLVVLGLIAVSEPSSVSGKQGSLKETVWSTDET
EEEESEEEPKLKYERLSNGVTEILQQDAASCMTVHDKFLALGTHYGKVYLLDVQGNITQK
FDVSPVKINQISLDESGEHMGVCSEDGKVQVFGLYTGEEFHETFDCPIKIVAVHPQFVRS
SCKQFVTGGKKLLLFERSWMSRWKSSVLHEGEGNIRSVKWRGHLIAWANNMGVKIFDITS
KQRITNVPRDDISLRPDMYPCSLCWKDAVTLVIGWGTSVKICSVKERHAGEVRDLPSRYV
EIVSQFETEFYISGLAPLCDQLVVLSYVKEVSEKTKREYCARPRLDIIQPLAETCEDISS
DALTVRGFQENECRDYHLEYSEGESLFYIVSPRDVVVAKERDQDDHIDWLLEKKKYEEAL
MAAEISQKNIKRHKILDIGLEYITHLLEKGEYDIAARKCQKILGKNAALWEYEVYKFKEI
GQLKAVSPYLPRGDPVLKPLIYEMILHEFLESDYEGFATLIREWPGDLYNNSVIVQAVRD
HLKKDSQNRTLLRTLAELYTYDKNYGNALEIYLTLRHKDVFQLIHKHNLFSSIKDKIVLL
MDFDSEKAVDMLLDNEDKISIKKVVEELEDRPELQHVYLHKLFKRDHHKGQRYHEKQISL
YAEYDRPNLLPFLRDSTHCPLEKALEICQQRNFVEETVYLLSRMGNSRSALKMIMEELHD
VDKAIEFAKEQDDAELWEDLILYSIDKPPFITGLLNNIGTHVDPILLIHRIKEGMEIPNL
RDSLVKILQDYNLQILLREGCKKILVADSLSLLKKMHRTQMKGVLVDEENICESCLSPIL
PSDAAKPFSMVVFHCRHMFHKECLPVPSMNSPAQFCNICSAKHRGPGSAILDMKK
NT seq
2688 nt
NT seq
+upstream
nt +downstream
nt
atgcccctctgtgtgcggtttttctgctgtcctggggtggggtgcctgatttgccgtggt
gctgtgcatcgtcctcaagcctttctggttgtcctgggacttattgccgtgtcagagccc
tcgagtgtttctgggaagcagggatctttgaaagaaactgtgtggagtacggatgagaca
gaggaagaagagagcgaagaggagcccaagctgaagtatgagcggctctccaatggggtc
acggagatcctgcagcaggatgctgccagctgcatgactgtgcacgacaagtttctggca
ctgggcacacattatggcaaggtttatttacttgatgtccaggggaacatcactcagaag
tttgatgtaagtcccgtgaagataaaccagatcagcctggatgaaagtggcgagcacatg
ggggtgtgttcagaggatggcaaggtacaggtgtttggactgtatactggagaagaattt
catgagacttttgactgtcccattaaaatcgtcgctgtgcacccgcagttcgtgagatcc
agctgcaagcagtttgtgacaggagggaagaagctgctgctgttcgaacgctcctggatg
agccgctggaagtcttcggtcctgcacgagggggaaggaaacatccggagtgtgaagtgg
agaggccacctgatcgcgtgggccaacaacatgggtgtgaagatttttgacatcacttcc
aagcagagaatcaccaacgtgccccgggatgacataagtctccgcccagacatgtacccc
tgcagcctgtgctggaaggacgcagtgacgctggtcattggctggggcacgtccgtcaag
atttgctcggtgaaggagcggcatgcaggcgaagtcagggacctgcctagtcgatacgtt
gaaatagtgtctcagtttgaaactgaattctacatcagtggactcgcgcctctctgcgat
cagctggttgtgctctcctatgtgaaggaggtttccgagaaaacgaagagagagtattgt
gccaggcctcgcctggacatcatccagcccctcgctgagacctgtgaagacatctcttcg
gacgctctgaccgtcagaggcttccaggaaaatgagtgcagagattatcacctagagtac
tctgaaggggaatctctcttctacatcgtgagtccaagagatgtcgtagtcgccaaagaa
cgagaccaagatgatcacattgactggctgcttgaaaagaagaaatatgaagaagcattg
atggcagctgaaattagccagaagaacattaaaagacacaagattctggacattggcttg
gagtacataacccacttgctggagaaaggagagtatgacatcgcggcgcgcaagtgccag
aaaattcttgggaaaaatgcagcactgtgggagtatgaagtttacaagtttaaagaaatt
ggacagcttaaggctgttagtccttatttaccgagaggggatccagttctgaaaccactc
atctacgaaatgattcttcatgaatttttggaaagtgattatgagggctttgccactttg
atcagggagtggcctggagatctgtataacaattccgtgatagtgcaggcagtccgggat
cacctgaagaaggacagtcagaacaggaccttactgaggaccctggcagagttgtacacc
tacgacaaaaactatggcaatgctctggaaatatacttaacattaagacataaggatgtt
ttccagttgatccataagcataatcttttcagttctatcaaggataaaattgttttgtta
atggattttgattcagagaaagctgttgacatgcttttggacaacgaagataaaatttca
attaaaaaagtcgtggaagaattagaagacagaccagaattgcagcacgtgtatctacat
aagcttttcaagagggaccatcacaaaggtcaacgctaccatgagaaacagatcagtctc
tatgccgagtacgatcgaccaaacctgctcccgttcctccgcgacagcacccactgcccg
ctcgagaaggctcttgagatctgccaacagagaaactttgtagaagagaccgtatatctt
ctgagccgcatgggtaatagccgaagtgccctgaagatgatcatggaggaattacatgat
gttgataaagcaattgaatttgccaaggagcaagacgatgcagaactctgggaagatttg
attttatattccatcgacaaaccaccatttattactggcttgttaaacaacattggcaca
catgttgatccaattctgttgattcaccgtatcaaggaagggatggagattcccaatttg
agagattccttggtcaaaattctacaagactacaatctgcagattctacttcgtgaaggc
tgcaagaagattctcgtggctgactctttgtccttgctgaagaaaatgcaccgtacgcaa
atgaaaggtgttctagtcgatgaggaaaatatctgtgagtcctgcctttcccctattctt
ccttcagatgctgccaagcccttcagcatggtggtcttccactgccgccacatgttccac
aaggagtgtctgcccgtccccagcatgaattctcctgcgcagttctgtaacatttgcagc
gctaagcaccgcggcccaggaagtgccattttggacatgaaaaaatag
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integrated database retrieval system
