Sorex araneus (European shrew): 101556505 Help Entry 101556505         CDS       T07854                                  Symbol COL18A1 Name (RefSeq) collagen alpha-1(XVIII) chain   KO K06823   collagen type XVIII alpha Organism sara  Sorex araneus (European shrew) Pathway sara04974   Protein digestion and absorption Brite KEGG Orthology (KO) [BR:sara00001]  09150 Organismal Systems   09154 Digestive system    04974 Protein digestion and absorption     101556505 (COL18A1)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:sara04147]     101556505 (COL18A1)    00535 Proteoglycans [BR:sara00535]     101556505 (COL18A1)    00536 Glycosaminoglycan binding proteins [BR:sara00536]     101556505 (COL18A1) Exosome [BR:sara04147]  Exosomal proteins   Exosomal proteins of other body fluids (saliva and urine)    101556505 (COL18A1) Proteoglycans [BR:sara00535]  Extracellular matrix (ECM) proteoglycans   Basement membrane proteoglycans    101556505 (COL18A1) Glycosaminoglycan binding proteins [BR:sara00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    101556505 (COL18A1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Endostatin Collagen Fz Collagen_trimer DUF959 Laminin_G_3 Motif Other DBs NCBI-GeneID:  101556505 NCBI-ProteinID:  XP_012791467 LinkDB All DBs Position Unknown AA seq 1550 aa AA seqDB search MAADPCGLGRLLLFLGCLAAAQPQMLDWLGIPAAGGLTAPASPLLEAHTGPSPLEAQEAA QTAGPGRKDDNLALVGDKILHLAEGIRSYVQLWSDILPTVVVPSSGLGGFLPGAAERPPD VHRIWTAGDPFLWQPGPDSSSSNLMALAPVPQDPAAWAPPRDSALPPLVSGRATGLLTPA GLLVPPTPGRCLPGPPSLPACSRLGLWRSWLPNHLGHTSRQEVQAAARSWDGLLRARCHR FLAWFVCLLLAPPCGPREPGPPPCRQFCEAVWDSCWDHLDLTGLPVPCTSLPAQEDGACV FLGPITDTVGAEVGLLQLLGEPPPPQVTAVEDPDVGPAFLFGPDSNSGQAARTHFSSRFF PDFALLLRVRPDSDRAGVLFAITDAAQAVVTVGAKLGAVTEGHQEVQLLYTEPGAPATRV AAAFHLPAFPGHWVRLALSVRGQSATLFVDCKEVQRLPLARESRGLQLEPGAGLFVAQAG AADPDKFQGAIAELRIRRDPHVTPQLCLEDEEDDRDDDDGASGDVGSGTEEQLTPDSEDR TLPDSAEAAMWDSSIQNPEGRRAEGGLKGQKGEPGPQGPPGPAGPTLRTPSIQPVPGPQG PPGPPGPPGENGTPGKDGERGSPGEDGRPGDTGLQGFPGMPGDVGPKGEKGDPGIGARGP PGPQGPPGPPGPPFRPDRLTFIDMEGSGFSGDQESFRGPRGYPGPPGPPGVPGLPGEPGR FGLNSSVVPGPAGLPGVPGRKGLPGPPGPQGPSGPPGKSGRPGPMGAKGSLGEAGAPGPK GSKGDSGPMGAPGRNGLAGAPGPAGPPGPPGPPGPPGPGLPAGFDDMEGSGVPFWVPSQG AGNRQGVVGPPGAKGDPGPVGPPGSKGEVGASGARGLPGLPGREGASGTRGLKGDKGSRG EKGDPGRDGVGHPGLPGPPGPPGPVVYVSEQDRAVASVPGPEGRPGFAGFPGPAGPKGDL GSKGQQGPPGPKGEKGEPGAVFSPDGRAVAPAQKGAKGEPGFRGPPGPYGRPGHKGDIGF PGRPGRPGMNGLKGEKGEPGDASIGFGVQGPPGPPGPPGLPGLPGKPVYDSNAFVDSSRP GPPGLPGFPGPSGAKGDKGEVGPPGAPGQFPLDFFQLGAEMKGEKGDRGDVGQKGERGEP GVGGGFFGSSVPGPPGPPGYPGIPGPKGESVRGQPGPPGPQGPPGIGYEGRQGPPGPPGP PGPPGPPSFPGPYRQTISVPGPPGPPGPPGPPGNMGTSSGQVRIWPTYQAMLDTAPEVPE GWLLYVADREELYVRVRRGFRKVLLEARTPLPRGTDNEVAALQPPLVQQMQEGNPYPRRE PAPSTVRPWRADDILASPPRPQPYPGAPHHGAYVHPRPARPTETPAYAHLDFRPVLHLAA LNSPQSGGLRGIRGADFQCFQQARAAGLSGTFRAFLSSRLQDLHSIVRRADRHAVPIVNL KDEPLFPNWEALFSGSEAQLKPGARLFSFDGRDVLRHSTWLHKSVWHGSDPSGRRLTESY CETWRTEAAGTVGQASPLQTGRLLGQKAVSCHSALVILCIENSVMSAASQ NT seq 4653 nt NT seq  +upstreamnt  +downstreamnt atggccgctgacccctgcggccttggccgcctgctcctgttcctgggctgcctggcagcc gcacagccccaaatgctggattggctggggattccggccgccggcgggctcacagcccca gccagccctctgctcgaggcccacacgggcccctcacccctggaggcccaggaggcggcc cagacagcgggtccgggcaggaaggacgacaacctcgcactggtgggagacaagattctg catctggccgagggcatccggagctacgtccagctgtggagtgacatcctgcccactgta gttgtgccctcctcggggctgggcgggttcctccccggggcggccgagcgtccccccgat gtacacaggatctggacagcgggggaccctttcctgtggcagcctggcccggacagcagc tccagcaacctgatggcgctggcccctgtgccgcaggaccccgcagcttgggcgcctcct agggactctgctctgcctccacttgtctctgggcgtgcaactggcctgctgacccccgct gggctgctggtgccccccacccccggccgctgccttcccggaccgccctccctgcccgcc tgcagccgcctgggcctctggcgctcctggctgcccaaccacctcggccacaccagccgc caggaggtgcaggcggcggcgcggtcctgggacggcctcctgcgtgcccgctgccaccgc tttctcgcctggttcgtctgcctgctgctggccccgccgtgcggcccccgggagcctggg cccccgccctgccgccagttctgtgaggctgtgtgggactcgtgctgggaccacctggac ctcaccgggctgccggtcccctgtacctcactgcccgcacaggaggacggggcctgtgtg ttccttggtccaatcacagacacagtgggagccgaggtggggctgctgcagcttctcggg gagcccccgccgccgcaggtgaccgccgtggaggaccccgacgtgggcccggccttcctc ttcgggcctgactccaacagcgggcaggcggcgcgcacgcacttctccagccgcttcttc cccgactttgcgctgctgctgcgggtgcggcctgactcggaccgggcgggtgtgctgttc gccatcaccgacgcggcgcaggccgtggtgactgtgggtgccaagctgggcgctgtcacc gagggccaccaggaagtgcagctgctctacacagagcctggcgccccggccacgcgcgtg gcggccgccttccacctacccgccttccctggccactgggtgcgcctggcgctgagtgtg cgtgggcagtcagccacgctctttgtggactgcaaggaggtgcagcggctgccgctggca cgcgaatcccgtggcctgcagctggagcctggtgctggcctcttcgtggctcaggcggga gcggccgaccccgacaagttccagggggcaattgcagagctgaggatacgcagggacccc catgtgaccccccagctctgtctggaggatgaggaagacgacagagatgatgacgacggg gcgtcaggagatgtgggcagcggcacggaggagcagctgacacctgacagtgaagacagg accttgcctgacagcgctgaggccgccatgtgggacagcagtatccagaacccagagggc cgccgggcagagggaggtctgaaggggcagaagggggagccaggcccccagggcccccca ggtccagctggccccacactgcggacccccagcatacagcctgtgccaggaccacagggc ccccctggacccccagggccgccgggggagaacggcacccctgggaaggatggtgagcgg ggaagtcctggtgaagatggaagacccggtgacacggggctgcagggcttcccaggaatg ccgggcgacgtgggtcccaagggggagaagggggaccctgggattggggcaagaggaccc ccaggaccgcaaggacctccgggacccccgggaccacccttcaggcccgacaggctgacc ttcattgacatggagggctccggcttcagcggggaccaggagagcttccggggccccaga ggctaccccggccccccgggcccccctggagtcccaggcctgcccggagagcctggccgc tttggactgaacagctcggtggtccctggacctgcaggcctgcccggggtgcccgggagg aaaggactccccggcccccccggcccccagggaccctcaggtcctccaggaaaaagtggg cgtccaggccccatgggtgcgaagggcagcctgggtgaggcaggcgccccaggacccaag ggaagcaagggggattctggccccatgggagctcccgggagaaatggcttggcaggcgcc ccgggaccagctggaccaccagggccccccggcccccccggccccccaggcccaggactg cctgcaggttttgatgacatggaaggttccggagtgcccttctgggtaccatcacaaggt gcaggcaaccgacagggagtggtcggtccgcctggagccaagggcgaccctggcccagtg ggcccccccggatccaagggagaggtgggcgcttcaggtgcccgcgggttgcctggcctt cctggcagagagggtgcttcaggcactcggggcctgaaaggagacaaaggcagcagaggg gagaagggcgatccgggcagagacggagtcgggcatcctggccttcccggacccccgggg cccccagggccggtcgtctacgtgtctgaacaggacagagccgtggcctctgtcccagga ccggagggcaggcccggctttgctggcttccctggcccagcggggccaaagggcgacctg ggctccaaaggccagcagggccccccagggcccaagggtgagaagggggagccgggcgca gtcttcagccccgatggcagagcagtggcccctgcccagaaaggtgccaagggagagcct ggcttccgtggacccccgggtccctatggacggccagggcacaagggggacatcggcttt ccaggacggccgggccgccccgggatgaacggattgaagggcgagaaaggggagcccgga gacgccagcatcggcttcggcgtgcagggcccccctggccccccaggacctccagggctc cccggactccctgggaagcctgtgtacgacagcaatgcattcgtggactctagtcgtcca ggacctccgggactgccaggtttcccgggcccttcaggagcaaagggtgacaaaggagag gtgggcccacccggagccccaggccagttcccgcttgactttttccagctgggggccgag atgaagggcgagaagggggaccgcggggacgtggggcagaagggggagcgaggcgagccc ggcgtgggtggcggattcttcggctccagcgtgcctggccctcccgggcccccaggctac cctggcatcccgggccccaagggagaaagcgttcggggccagcctggcccacctggacct cagggcccccctggcattggctatgagggacgccagggcccacccggccctcctggccct cctgggccccctggcccaccatcgtttcctgggccctacaggcaaaccatcagtgtccca gggcctcccggcccccctggcccccccgggccacctggaaatatgggcacatcctcaggg caggtacgcatctggcccacgtaccaggcaatgctggacacggcacccgaggtgcctgag ggctggctgctctacgtggctgatcgggaagagctgtatgtgcgtgtgcggcgtggcttc aggaaggtcctgctggaggcgcggacgccactgccccgagggacggacaacgaggtggcc gcgctgcagcccccgctggtgcagcagatgcaggaggggaacccgtacccgcggcgcgag ccggcgccctccaccgtgcggccctggcgcgccgacgacatcctggccagccccccgcgc ccgcaaccctaccccggcgccccgcaccacggcgcgtacgtgcacccgcgacccgcgcgc cccaccgaaacgcctgcatacgcgcacctggacttccgtcccgtgctgcacctggcggcg ctcaacagcccgcagtcgggcggcctgcgcggcatccgcggcgcggacttccagtgcttc cagcaggcgcgcgctgcagggctgagcggcaccttccgtgccttcctgtcgtcgcggctg caggacctgcacagcatcgtgcggcgcgccgaccgccacgcggtgcccatcgtcaacctc aaggacgagccgctcttccccaactgggaggccctgttctccggctccgaggcccagctg aaacccggtgcgcgcctcttctctttcgatggcagggacgtcctgcgccactccacctgg ctgcataagagcgtgtggcatggttcggaccccagcggccgccggctgaccgagagctac tgtgagacatggcggacggaggcagcaggcacagtgggccaggcgtccccgctgcagacg ggcaggctgctgggacagaaggctgtgagctgccacagtgccttggtcatcctctgcatc gagaacagtgtcatgagcgccgcctcccagtag

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