Sorex araneus (European shrew): 101556825
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Entry
101556825 CDS
T07854
Symbol
USP42
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 42
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
sara
Sorex araneus (European shrew)
Brite
KEGG Orthology (KO) [BR:
sara00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sara01002
]
101556825 (USP42)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sara04121
]
101556825 (USP42)
Enzymes [BR:
sara01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
101556825 (USP42)
Peptidases and inhibitors [BR:
sara01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
101556825 (USP42)
Ubiquitin system [BR:
sara04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
101556825 (USP42)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
101556825
NCBI-ProteinID:
XP_004617286
LinkDB
All DBs
Position
Unknown
AA seq
1277 aa
AA seq
DB search
MTIVDKASESSDPSAYQNQPGSSEAVSPGDMDAGSASWGAVSSLNDVSNHTLALGPVPGA
VVYSSSSVPDKSKPSPQKDQALGDGIAPPQKVLFPSEKICLKWQQTHRVGAGLQNLGNTC
FANAALQCLTYTPPLANYMLSHEHSKTCHAEGFCMMCTMQAHITQALSNPGDVIKPMFVI
NEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACLNGSNKLDRHTQATTLVCQIFGGYLRS
RVKCLNCKGVSDTFDPYLDITLEIKAAQSVNKALEQFVKPEQLDGENSYKCSKCKKMVPA
SKRFTIHRSSNVLTLSLKRFANFTGGKIAKDVKYPEYLDIRPYMSQPNGEPIIYVLYAVL
VHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLSQQAYVLFYIRSHDVKNGGE
LTHSPHSPGQSSPRPVISQRVVSSKQATAGFIGPQLPSHMIKNPPHLNGTGPLKETPSSS
LSSPNGNSSVNRAAPVGAPTSVPNWSVSRPSVLPEHPKKQKITISIHNKLPVRPGPPQPG
LLSSPLETPAKPAPSSTVTNPSAIQSTSSTAAPAASSKATKPPAPSEPCAAPVVNGKARL
HASVLVPYGAESSEESDEEAKGLGRENGLGVTQGTAGGETAPHELLREPAALNGADGADG
EPTAHGPSLDGATGQGQPPLHTENPFAKANGLPGKLMPAPLPPLPEDKILETFKLSNKAK
GSAEESSPAPAEESPLGGPYADLEAGSPPPACQQLPEAASGLSHLKAALLPCDPSAPSTK
EASENVAAVPAESLACASPGEADRAVCEAGQLPPTGDPGSTAEEQGRASPDTASPQRPPA
PGSTAGELSPAPSARPEVDGTHELLVHISRDVGAAAEGLPAVPADKAAEGPTEGGPSASP
GEAGEESKGGHRVPGPSPGKEKISSLRKVDRGHYRNRRDASSSGERTRESRSKTEDHYHK
KRHLSERERAKQECHRREHCSGSHGDRGSPGERRSLGRYGHQQEWSRHHHSESEHAWGRE
KYYPEQARWGKCRHYHSRSALYLPREARDWKAFPGARDHSRPYDYYKGRKAYEKERHHGP
AHSLPLYPEKYSHEKTALGAEGGCDLSGRFRGPENTKPRKRRHDSVENVDGHGGKPAWRS
APKGPLEEPKAKKHKKSKKKKKSKDKHRARDSRHPPDSDLSGAYSDADLHRHKKKKKKKK
RHSRRSGDFAQSSGLHPPQASGPKPTHLFRRTEDGLPPADGLALEKTKHFRLESRADRCP
LSECGQGKRAEVTGRGG
NT seq
3834 nt
NT seq
+upstream
nt +downstream
nt
atgaccatagttgacaaagcttctgaatcttcagacccctcagcctatcagaatcagcct
ggcagttctgaggctgtctcacctggagacatggatgcaggctctgccagctggggtgct
gtgtcttccttaaatgatgtctcaaatcacacacttgctttaggaccagtacctggtgct
gtagtttattccagttcatctgtacccgataaatcaaagccatcaccacagaaggatcaa
gccctaggtgatggcattgctcctccacagaaagttcttttcccatctgagaagatttgt
cttaagtggcagcaaacccacagagtcggagccgggctccagaacctgggcaatacctgc
ttcgccaatgcagccttgcagtgtctgacgtacacgccacccctcgccaactacatgctc
tcgcacgaacactccaagacctgccatgcagaaggattctgcatgatgtgtacaatgcag
gcgcacatcacccaggcactcagtaatcccggggacgttatcaaacccatgttcgtcatt
aatgagatgcggcggatagccaggcacttccgctttggaaaccaagaagatgcccatgaa
ttcctgcagtacactgtcgatgctatgcagaaagcctgcctgaacggcagcaacaagtta
gacagacacacccaggctaccacactcgtctgtcagatatttggtggatacctgcgatcg
agagtcaaatgtttaaattgcaaaggtgtttcagatacgtttgatccgtaccttgacata
acattggagataaaggccgctcagagtgtgaacaaggcgctggagcagtttgtgaagcca
gagcagctggacggagagaattcgtacaagtgcagcaagtgtaagaagatggttccagct
tccaagaggttcaccatacataggtcctccaatgtcctcacactttctctgaaacgcttt
gccaattttactggtggaaaaattgctaaggatgtgaaataccccgagtacctggacatc
cgaccgtacatgtcgcagccaaatggggagcccatcatttatgtcctgtacgcagtactg
gtacacacgggctttaactgccacgctggccactacttctgctacatcaaagcaagcaat
ggcctctggtatcagatgaatgactccatcgtctccaccagtgacatcagatcggtactc
agccagcaagcatatgtcctgttctatatcaggtcacatgatgtgaagaatggaggtgag
ctcactcactccccccacagccccggccagtcctcgccccgaccggtcatcagccagcgt
gtggtcagcagcaagcaggccacggccgggttcattggtccgcagctgccttcgcacatg
atcaagaacccaccgcacctgaacgggacgggcccacttaaggagacgcccagcagctcc
ctgtcgagccctaacgggaattccagcgtcaaccgggccgctcccgtgggtgctccaact
tccgttccgaactggtcggtcagcaggccctcggttctcccagagcaccccaagaagcag
aagatcaccatcagtattcacaacaagttacctgtgcgcccaggcccacctcagcccggc
ctcctgagcagccccctggagaccccggccaagcccgccccatcctccaccgtcaccaac
ccctctgcaatacagtctacctcgagcaccgctgcccccgcggcatccagcaaggccacg
aagccgcccgccccgagcgagccctgcgccgcaccagtggtgaacggcaaggccaggctg
cacgccagtgtcctggtcccctatggggccgagtcatctgaggagtctgacgaggaggcc
aagggtctcggcagggagaacggcctgggggtgacacagggcacagcaggtggcgagact
gctcctcacgagctgcttcgagaacctgcggcgctgaacggtgctgacggcgcagacggc
gagcccacggcacacgggccctcattggacggcgccacaggccaagggcagcccccgctg
catacagaaaatcccttcgctaaggcaaatggtttacctggaaagctgatgcccgctccg
ttgccgcctctcccggaagataagatcttagagaccttcaaactcagcaacaaagcgaaa
ggctcggcagaggaatcaagccccgcgccagcagaagaaagcccactggggggcccctac
gcagaccttgaggctggcagccctcctcccgcgtgccagcagctccccgaggcggcctct
ggtctcagccacctgaaggcggctctgctgccctgcgaccccagcgccccctccaccaaa
gaagcgtccgagaacgtggccgccgtgcctgccgagtctctggcctgcgccagccctggg
gaggccgacagagccgtctgcgaggccggtcagctcccacccacaggtgaccccgggagc
actgcggaggagcagggcagggcctccccggacacagccagcccacagcggcccccagcc
ccaggcagcaccgcgggagagctgagcccggccccctcggctcgccccgaggtcgacggc
acccacgaactcttggttcacatcagccgggacgtgggagcagccgccgaggggctgccc
gcagtgcccgcagacaaggccgcggaaggccccacggaagggggcccgtcagcgagtccc
ggcgaggctggtgaggaaagcaagggggggcacagagtcccgggcccctcgccaggcaag
gagaagatcagcagcctccggaaggtggaccgaggccactaccggaaccgaagagacgct
tcttccagcggggagcgcacacgggaaagccggagcaaaacggaggaccattaccacaaa
aagcggcacctgtctgagcgggagcgggccaagcaggagtgccaccggcgcgagcactgc
agcgggagccatggcgacaggggcagcccgggcgagcggcgctccctgggcaggtacggc
caccagcaggagtggagccgccaccaccactcggagagcgaacacgcgtggggccgggag
aagtactaccccgagcaggcgcggtggggcaagtgcaggcactaccacagccgctcggcc
ctgtacctgccgcgggaggcacgcgactggaaggccttccccggggcccgcgaccacagc
cggccctatgactactacaaaggcaggaaggcctacgagaaggagcggcaccacggcccg
gcccacagcctccccctgtaccccgagaagtactcccacgagaaaacggcacttggagcc
gaaggcggctgtgacctctcaggccgtttccgtggaccggagaacacgaagccacggaaa
cggagacacgacagcgtcgagaacgtggacgggcatgggggaaagcccgcctggaggagt
gcacccaagggccctttggaagagcccaaagcgaagaagcacaaaaagtcaaagaagaaa
aagaaatccaaagacaagcaccgggcccgagactccaggcaccccccagactccgacctc
tcgggcgcttactcggacgcggacctccacagacacaagaagaagaagaagaaaaagaag
cgacactccaggagatcaggggactttgctcagagctcgggactgcacccccctcaggcc
tccggccccaagcccacccacctcttccggagaactgaggacgggctcccccctgctgac
ggcctggccctcgagaaaaccaaacacttccggctggagagcagggccgacaggtgtcct
ctgtccgagtgtggccagggtaagagggcagaggtgacggggcgtggcggctag
DBGET
integrated database retrieval system
