Sorex araneus (European shrew): 101556908
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Entry
101556908 CDS
T07854
Symbol
COL8A2
Name
(RefSeq) collagen alpha-2(VIII) chain
KO
K23455
collagen type VIII alpha
Organism
sara
Sorex araneus (European shrew)
Pathway
sara04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
sara00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
101556908 (COL8A2)
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Motif
Pfam:
Collagen
C1q
BclA_C
Motif
Other DBs
NCBI-GeneID:
101556908
NCBI-ProteinID:
XP_012789445
LinkDB
All DBs
Position
Unknown
AA seq
699 aa
AA seq
DB search
MRGALAPLPPLLLLLLGCRPRTATGGGAGRAAGYAPVKYVQPMLKGPVGPPFREGKGQYL
EMPLPMLPMDLKGEPGPPGQPGPRGPPGPPGFPGKPGTGKPGLHGQPGPAGPPGFSRMGK
AGPPGLPGKTGPPGQPGLRGEPGSRGDQGLRGPPGPPGLPGPSGIAVPGKPGPQGVPGPP
GFGGEPGPQGDPGPPGGRGLKGDKGVGQPGLPGAPGQGGAPGPPGLPGPAGLGRPGLDGL
PGAPGDKGESGPPGVPGPRGEPGALGPKGAPGVNGIGVPGAAGVPGPQGLVGAKGEPGPR
GPPGLMGPAGYGVPGLPGPKGDRGPAGVPGLLGDRGEPGEDGEPGEQGPQGLGGPPGLPG
SAGLPGRRGPPGPKGESGPGGAPGVPGIRGDQGPSGLAGKPGVPGERGLPGAHGPPGPAG
PKGEPGSIGRPGGPGVAGALGQKGELGLPGQPGLRGPSGIPGLQGPAGPIGPQGLPGLKG
EPGLPGAPGEGTVGEPGVTGPTGPPGVPGSPGLTGPPGPPGPPGPPGAPGALDETGIAGL
HLPDSGVEGAVLGKGGKPHLGLGELSAQATPAFTAVLTSPFPASGMPVKFDRTLYNGHSG
YNPATGIFTCPVGGVYYFAYHVHVKGTSVWVALYKNNVPATYTYDEYKKGYLDQASGGAV
LQLRPNDQVWVQMPSDQANGLYSTEYIHSSFSGFLLCPT
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atgcggggggctctggctcccctgcccccgttgctgctgctcttgctgggctgcaggcct
cggacagccactggcggaggggccggccgggcggcgggctacgcgcctgtgaagtacgtg
cagcccatgctcaaggggcctgtggggcccccgttccgcgagggcaagggccagtacctg
gaaatgcctctgccgatgctgccgatggacctgaaaggagaacccggccccccggggcag
cctggccctcgggggcccccaggcccacctggcttcccaggaaaaccaggcacggggaag
ccggggctacatgggcagcctggccccgccgggccccctggcttctcccggatgggcaaa
gctggtcccccagggctcccaggcaagaccgggccaccggggcagccggggctgcggggg
gagccgggcagccgaggggaccagggcctccgggggccccccgggccacctggccttcct
gggccctcaggtatcgctgtccctgggaaaccaggcccccagggggtaccagggccccct
gggtttggaggggagccggggccccagggtgacccgggacctccagggggtcgaggcctc
aagggagataagggggtgggccagccggggctgccgggggccccagggcaggggggcgcc
cctgggccccctgggcttcctggccctgctggcttgggcagacctggcctggatgggctt
cctggggcccctggagacaagggtgagtctggaccccctggggtaccagggcccagaggg
gaaccaggggctttgggccccaaaggggcccctggggtgaatggaatcggggtgccaggg
gcagcaggggtgccaggtccacaaggcctggtaggggcgaaaggcgaacctgggccccgg
ggcccccctggcctgatgggccctgctggctatggggtccctgggctgcccggccctaag
ggagacaggggccccgcgggggtcccagggctcttgggggacaggggggagccgggggag
gatggggagcccggggaacagggcccacagggcctcggggggcctcctggccttccaggg
tctgcagggctccccgggagacgggggccccctggacctaagggggagtcagggcccgga
ggagctccaggagtgcctggcattcgaggtgaccagggaccgagtggcctggctgggaaa
cctggggttccaggagaaagggggctcccaggggcccatggaccccctggaccagctggg
cccaagggggagccgggttccatcggccgccctgggggccccggggtggcaggcgccctg
gggcagaagggtgagctggggctccctgggcagcctggcctgaggggcccctcaggaatc
ccaggactccagggcccagctggcccgatcgggccccagggcctgcctggcctgaaaggg
gagccaggcctgccaggggcccccggagaggggacagtgggtgagcctggcgtgactggg
cctacagggccccctggggtccccggttcccctggactcacgggccctcccgggcctccc
gggcctcccggccccccaggcgcccccggggccttggatgagacgggcatcgcgggcctg
cacctgcccgacagtggcgtggagggggcggtgctgggcaaggggggcaagccgcacctg
gggctgggggagctgtcggcccaggccacaccggccttcacggcggtgctcacctcgccc
ttccctgcctcgggcatgccggtcaagttcgaccggacgctctacaacggccacagcggc
tacaacccggccacaggcatcttcacctgccccgtgggcggcgtctactacttcgcctac
cacgtgcacgtcaagggcaccagcgtgtgggtggcgctgtacaagaacaacgtgccggcc
acctacacctacgacgagtacaagaagggctacctggaccaggcgtcgggcggcgccgtg
ctgcagctgcggcccaacgaccaggtctgggtgcagatgccctcggaccaggccaacggc
ctctactccaccgagtacatccactcctccttctcgggcttcctgctctgccccacatag
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