Sorex araneus (European shrew): 101556922 Help Entry 101556922         CDS       T07854                                  Symbol IGHMBP2 Name (RefSeq) DNA-binding protein SMUBP-2   KO K19036   ATP-dependent RNA/DNA helicase IGHMBP2 [EC:5.6.2.5 5.6.2.3] Organism sara  Sorex araneus (European shrew) Brite KEGG Orthology (KO) [BR:sara00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03009 Ribosome biogenesis [BR:sara03009]     101556922 (IGHMBP2)    03012 Translation factors [BR:sara03012]     101556922 (IGHMBP2) Enzymes [BR:sara01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.3  DNA 5'-3' helicase      101556922 (IGHMBP2)     5.6.2.5  RNA 5'-3' helicase      101556922 (IGHMBP2) Ribosome biogenesis [BR:sara03009]  Eukaryotic type   Other ribosome biogenesis factors    101556922 (IGHMBP2) Translation factors [BR:sara03012]  Eukaryotic type   Initiation factors    Initiation associated factors     101556922 (IGHMBP2) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  AAA_11 AAA_12 SMUBP-2_HCS1_1B AAA_30 AAA_19 R3H Viral_helicase1 zf-AN1 AAA_16 ResIII AAA_22 Helicase_RecD nSTAND3 Flavi_DEAD DEAD IstB_IS21 SLFN-g3_helicase UvrD-helicase AAA AAA_25 NPHP3_N UvrD_C_2 PhoH NTPase_1 T2SSE DnaB_C CbiA Zot ABC_tran S-AdoMet_synt_N SRP54 Herpes_ori_bp DAP3 cobW AAA_14 AAA_31 AAA_7 Motif Other DBs NCBI-GeneID:  101556922 NCBI-ProteinID:  XP_012790415 LinkDB All DBs Position Unknown AA seq 912 aa AA seqDB search MDSAAVESFVAKQLDLLELERDAEVEERRCWQESVSPRELQSRGVCLLKLQVSGQRTGLY GRLLVTLEPRRGGAPALPSNSFTSGDIVGLYEAQGDSPLATGTLTRITSRCVTVAFDESQ DFQLSCDQEHSYRLLKLANDVTYRRLKKALVALRKCHSGPASSLIDVLFGGLAPSAAGEL PPLALGNASLDASQQEAVRFALSQKELAIIHGPPGTGKTTTVVEIIQQAVKQGLKVLCCA PSNVAVDNLVERLARCPLRLLRLGHPARLLDSIQQHCLDAVLARADHARIVADIRQDIDR VLASSRSARDAREKHGLRGEVRLLRRELREREEAAVLASLRAADVVLATNTGASPDGPLK LLPEGHFDMVVIDECAQALEASCWIPLLQARKCVLAGDHKQLPPTVVSHRAAQAGLALSL MERLAEAHGAAAVRMLTTQYRMHGAIMRWASDALYGGQLTAHPSVAQHLLRDLPGVAATE ETGLALLLVDTAGCGLLELDEDDEQSRGNPGEVRLVDLHVQALVDARVQPRDIAVITPYH RQVDLLRQSLAARHPELEIKSVDGFQGREKEAVVLSLVRSNRTGEVGFLAEDRRLNVAVT RARRHVALICDSHTAGQHPFLRRLLDHFAEHGEVRTAFEYLDDLVPENYSHQRAQAPGPR GARRGGAAVAGKPAGRRPEQGAAAGARRERKKPGPGAPSRTQPSRDGDGAEGFRAQLLAF LASERTQLPFPATLSPLDRLRIHQLAEELGLRHDSSGEGAQRFITISKREPPAREGARKA PQKSKKKEPKGPAAPELPGGDDFDALISAAVKADSTCGMPSCAASVVTLGQLCAHCNRRY CLSHHLPEVHGCGERARAHARQRISREGVLYPGSGPRERGLDAAKRAQLQRKLDRRLDEL SSQRQSRRRDRK NT seq 2739 nt NT seq  +upstreamnt  +downstreamnt atggactcggcggccgtggagagtttcgtggccaagcaactggacctgctggagctcgag agggacgcggaggtggaggagcgcaggtgctggcaggagagcgtgtctcccagggagctg cagagccgcggcgtgtgtctgctgaagctgcaggtgtcgggccagcgcaccggactctac gggcggctgctggtcacgctggagccccggaggggcggcgccccggcactgccgagcaac agcttcacttccggtgacatcgtgggtctgtacgaagcccagggggacagcccgctggcc acggggaccctgacccgcatcacctcgcggtgcgtcaccgtggcctttgatgagtcccag gacttccagctgagctgtgaccaggagcacagctaccggctgctgaaactcgccaacgac gtcacgtacaggcggctgaagaaagccctcgtcgccctgaggaagtgtcactccggcccc gcctcctcgctcatcgacgtcctctttgggggtttggcccccagcgctgccggcgagctc cccccgctggcccttggaaacgcctccctggacgcctcgcagcaggaagctgttcgcttt gctctgtcgcagaaggagctggccatcatccacgggccccctggcacggggaagaccacc acggtggtggagatcatccagcaggcggtcaagcagggcctgaaggtcctgtgctgcgcg ccctccaacgtggcggtggacaacctcgtggagcggctggcgcgctgcccgctgcggctg ctgcgcctggggcacccggcccgcctgctggactccatccagcagcactgcctggacgcc gtgctggcccgcgccgaccacgcccgcatcgtggccgacatccgccaggacattgaccgg gtgctggcgagcagcaggagcgcgcgcgacgcgagggagaagcacggcctgcgcggggag gtgcggctgctgcggcgggagctgcgggagcgcgaggaggcggccgtgctggccagcctg agggcggcggacgtggtcctggccaccaacaccggggcttcccccgacggccccctgaag ctgctgcccgagggccactttgacatggtcgtcatcgacgagtgcgcccaggccctggaa gccagctgctggatccccctgctgcaggccaggaagtgcgtcctggccggagaccacaag cagctgccgcccactgtcgtctcccacagggcggcgcaggcagggctggccctcagcctc atggagcggctggcggaggcgcacggggccgcggcggtccggatgctgacgacgcagtac cgcatgcacggggccatcatgcgctgggcctccgacgcgctctacggcggccagctcacg gcacacccctccgtggcccaacacctcctgcgagacctccccggtgtggccgccacggag gagacgggcctggccctgctgctggtggacacggccggctgcgggctgctggagctggac gaggacgacgagcagtccaggggcaaccccggcgaggtgcgcctggtggacctgcatgtg caggccctggtggacgccagggtccagccgagggacatcgccgtcatcacgccgtaccac cgccaggtggacctgctgcgccagagcctggcggcccggcaccccgagctggagatcaag tcagtggacggcttccagggccgggagaaggaggccgtggtcctgtccctggtccggtcc aacaggacaggtgaggtgggcttcctcgccgaggaccggcgcctcaacgtggccgtcacc cgcgcccggcgccacgtggccctgatctgcgactcgcacacggccggccagcaccccttc ctcaggcgcctgctcgaccacttcgccgagcacggggaggtgcgcacggccttcgagtac ctggacgacctcgtgcccgaaaactactcccaccagcgggcccaggcccccggcccgcgg ggcgcccggcgaggcggcgcggcagtggccgggaagcctgcggggaggcggcccgagcag ggcgccgcggcgggggccaggcgggagcggaagaagccgggccccggggccccgtctcgg actcagcccagccgtgacggcgacggggccgagggcttccgggcccagctgctggccttc ctggccagcgagcggacacagctgcccttccccgccacactgagccccctggaccggctg cgcatccaccagctggccgaggagctgggcctgcggcacgacagcagcggggagggcgca cagcgcttcatcaccatcagcaaacgggagccgccggccagggaaggggcgcgcaaggcc ccccagaaaagcaagaagaaagagcccaaggggcccgcggccccggagctgcccggcggg gacgactttgacgccctcatctcggcggccgtgaaggccgacagcacgtgcgggatgccc agctgtgcggccagcgtggtgaccctgggccagctgtgcgcccactgcaaccgccgctac tgcctcagccaccacctgcccgaggtccacggctgcggggagcgggcgcgcgcccacgcc cggcagcggatcagccgggagggggtcctgtaccccggcagcgggccccgcgagcgcggc ctggacgccgccaagcgcgcgcagctgcagcggaagctggaccggaggctggacgagctc agcagccagaggcagagccgcaggagggaccggaagtga

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