Sorex araneus (European shrew): 101557183
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Entry
101557183 CDS
T07854
Symbol
HMBOX1
Name
(RefSeq) homeobox-containing protein 1 isoform X1
KO
K24885
homeobox-containing protein 1
Organism
sara
Sorex araneus (European shrew)
Brite
KEGG Orthology (KO) [BR:
sara00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sara03000
]
101557183 (HMBOX1)
Transcription factors [BR:
sara03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
101557183 (HMBOX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HNF-1_N
Homeodomain
Homeobox_KN
HTH_3
AbiJ_NTD3
DUF494
HTH_24
CUT
HTH_31
HTH_37
HTH_26
NOC3p
HTH_23
Motif
Other DBs
NCBI-GeneID:
101557183
NCBI-ProteinID:
XP_004614755
LinkDB
All DBs
Position
Unknown
AA seq
420 aa
AA seq
DB search
MLSSFPVVLLETMSHYTDEPRFTIEQIDLLQRLRRTGMTKHEILHALETLDRLDQEHSDK
FGRRSSYGGSSYGNSANNVPASSSTATASTQTQHSGMSPSPSNSYDTSPQPCTTNQNGRD
NSERLSLSNGKTSPTRYHVNSMGQRSYSFEASEEDLDVDDKVEELMRRDSSVIKEEIKAF
LANRRISQAVVAQVTGISQSRISHWLLQQGSDLSEQKKRAFYRWYQLEKTNPGATLSMRP
APIPIEDPEWRQTPPPVSATSGTFRLRRGSRFTWRKECLAVMESYFNENQYPDEAKREEI
ANACNAVIQKPGKKLSDLERVTSLKVYNWFANRRKEIKRRANIEAAILESHGIDVQSPGG
HSNSDDVDGNDYSEQDDSTSHSDHQDPISLAVEMAAVNHTILALARQGANEIKTEALDDD
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgctcagttcctttccagtggttttgctggaaaccatgtctcactacaccgatgagccc
agattcaccatagaacagatagaccttctccagcgcctccggcggactggaatgactaaa
catgaaatcctccatgccttggagaccttggaccgtctcgatcaggagcacagtgacaaa
ttcggaaggaggtccagctacggagggagctcgtacgggaacagcgccaacaacgtcccc
gcgtcttcctccacggccacggcctccacccagacccagcactcgggaatgtccccatcc
cccagcaacagctacgacacctccccgcagccctgcacgaccaaccagaatgggagggac
aacagcgagcgcttgtccctctccaacgggaagacgtcgcccacgcgctaccacgtgaac
agcatggggcagcgctcttacagctttgaggcgtccgaagaggacctcgacgtggacgat
aaagtggaggagttgatgaggagggacagcagtgtgataaaagaggaaatcaaggccttt
cttgccaaccggaggatttcccaggccgttgtggcgcaggtcacaggcatcagccagagc
cgcatctcccactggctgctacagcagggatcggacctgagcgagcagaagaagagagcc
ttctaccgctggtaccagctggagaagaccaacccaggggctacactgagcatgaggcca
gcccccatcccaatcgaggaccccgaatggagacaaacgccacccccagtctccgccacc
tcgggcaccttccgcctgcgacggggcagtcggttcacctggaggaaggagtgtctggcc
gtcatggaaagctacttcaatgagaatcaatatccagatgaagcaaagagagaagaaatt
gcaaatgcttgcaatgccgtcatacagaagccaggcaaaaaactctcagatctggaacga
gtaacctccctgaaagtctataattggtttgctaacagacggaaggagatcaagagaaga
gccaatatcgaagcagcaatcctggagagccatggcatagacgtgcagagtccgggcggc
cactcgaacagtgacgacgtggacggcaatgactactcagagcaggatgacagcactagc
catagtgaccaccaagaccccatctcattagctgtggaaatggcagcggtcaaccacacg
atcttggccttggcccgacaaggagccaacgaaatcaagacagaggccctggacgacgac
tga
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