Sorex araneus (European shrew): 101557651
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Entry
101557651 CDS
T07854
Symbol
TRIM54
Name
(RefSeq) LOW QUALITY PROTEIN: tripartite motif-containing protein 54
KO
K10653
tripartite motif-containing protein 54
Organism
sara
Sorex araneus (European shrew)
Pathway
sara04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sara00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
101557651 (TRIM54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sara04121
]
101557651 (TRIM54)
Ubiquitin system [BR:
sara04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
101557651 (TRIM54)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4_2
RING_XB3-XBAT31
zf-C3HC4
zf-B_box
zf-RING_5
zf-C3HC4_4
zf-RING_2
zf-C3HC4_3
zf-RING_6
TRIM_CC
DUF349
Sina_RING
CoiA_N
PHP
SpoIISA_toxin
DUF5799
Zn_ribbon_FGT1_2
KATNA1_MIT
UvrD_C
DUF5094
CYP38_PsbQ-like
Ima1_N
DUF1421
FUSC
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
101557651
NCBI-ProteinID:
XP_004619021
LinkDB
All DBs
Position
Unknown
AA seq
378 aa
AA seq
DB search
MNFTVGLKPLLADAHSMDNLEKQLICPICLEMFSKPVVILPCQHNLCRKCANDVFQASNP
LWQSRSSSTVSSGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESSRPLHSKA
EQHLMCEEHEDEKINIYCLSCEVPTCSLCKVFGAHKDCEVAPLPTIYKRQKSELSDGIAM
LVAGNDRVQAVITQMEEVCQTIEDNSRRQKQQLNQRFETLCAVLEERKGELLQALAREQE
EKLQRVRGLIRQYGDHLEASSKLVETAIQSMEEPQMALYLQQAKELINKXVGSAGEERRV
GGGGGARARGGVAGTPEPGYESMEQFSVGVEHVAEMLRTIDFQPGAFGDDDDDDAALDAE
DCGAGPEEERLDAPEGLH
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgaacttcacggtgggtctcaagccgctgctcgcggatgcgcacagcatggacaacctg
gagaagcagctcatctgccccatctgcctggagatgttctccaagccggtggtgatcctg
ccctgccagcacaacctgtgccgcaagtgcgccaatgacgtcttccaggcctcgaacccg
ctgtggcagtcgcgcagctccagcacggtgtcctcgggaggccgtttccgctgtccgtcc
tgcaggcacgaggtcgtcctggaccgccacggcgtctacgggctgcagcggaacctgctg
gtggagaacatcatcgacatctacaagcaggaatcgtcgcggccgctgcactccaaggcc
gagcagcacctcatgtgtgaggagcacgaggacgagaagatcaacatctactgcctgagc
tgcgaggtgcccacctgctcgctctgcaaggtcttcggtgcccacaaggactgcgaggtg
gccccactgcccaccatttacaaacgccagaagagtgaactcagcgacggcatcgcgatg
ctggtggcgggcaatgaccgtgtgcaggcagtgatcacgcagatggaggaggtgtgccag
acgatcgaggacaacagccgccggcagaagcaacagctcaaccagaggttcgagaccctg
tgcgcggtgctggaggagcggaagggggaactgctgcaggcgctggcccgcgagcaggaa
gagaagctgcagcgcgtgcgcggcctcatccgccagtacggggaccacctggaagcgtct
tccaagctggtggagacggccatccagtccatggaggagccgcagatggcgctctacctc
cagcaagcgaaggagttgatcaataagtgagtaggcagcgcgggggaggaaaggcgggtg
gggggcggcgggggcgcccgggcccggggaggggtggcggggacgccggagccgggctac
gagagcatggagcagttctccgtgggcgtggagcacgtggccgagatgctgcggaccatc
gacttccagccgggggccttcggagacgacgacgacgacgacgcggctctggacgcggaa
gactgcggcgcggggcccgaggaagagcggctggacgcgcccgaaggcctgcactga
DBGET
integrated database retrieval system
