Sorex araneus (European shrew): 101557709
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Entry
101557709 CDS
T07854
Symbol
SMC6
Name
(RefSeq) structural maintenance of chromosomes protein 6 isoform X1
KO
K22804
structural maintenance of chromosomes protein 6
Organism
sara
Sorex araneus (European shrew)
Brite
KEGG Orthology (KO) [BR:
sara00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sara03400
]
101557709 (SMC6)
DNA repair and recombination proteins [BR:
sara03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
101557709 (SMC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_23
SMC_N
TPR_MLP1_2
AAA_29
DUF3993
AAA_21
Motif
Other DBs
NCBI-GeneID:
101557709
NCBI-ProteinID:
XP_004609402
LinkDB
All DBs
Position
Unknown
AA seq
1099 aa
AA seq
DB search
MAKRKEENFFSPENAKRPRLESELEEDFDRDGDEDECTVSFTNGTSTLTAAEVGIIESIQ
LKNFMCHSMLGPFKFGSNVNFVVGNNGSGKSAVLTALIVGLGGKAVATNRGSSLKGFVKD
GQNSADISITLRNRGDDAYRANVYGDTIVVQQHISMDGSRSYKLKSGTGTVISTKKEELI
AILDHFNIQVDNPVSVLTQEMSKQFLQSKNEGDKYKFFMKATQLEQMKEDYSYIMETKER
TKEQINQGEERLIELKRQCLEKEERFQSIAGLSTMKTNLEYLKHEMAWAVVNEIEKQLNA
IRDNIKIGEDRAARLERKMEDQQVRLNEAEKNYKDIQDKLEKISQETNARAPECMALKAD
LTAKKRAFNEAEVLYNRSLNEYRALKKDDEQLCKRIEELKRSTDQSLEPERLERQKKISW
LKEKVKSLQDQEITVNQDIEQFQQAIEKNKEEHTRIKREELDVKHTLNYNQKQLKELKDS
KTDRLKRFGPHVPALLAAIDDAHRRGQFTYKPIGPLGACIHLRDPELALAIESCLKGLLQ
AYWCHNHADERVLQALMKKFYSPGTSRPQIIVSEFRKEMYDVRHRAAYHPEFPTVLTALE
IDNAVVANSLIDMRGIETVLLIKNNSVARAVMQSQRPPRNCREAFTADGDQVFAGRYYSS
ENTRPKFLSRDVDSEISDLENEIENKKAQILNLQQHLSALEKDIKHQEEILKRCQLHYKE
LKMKIRKGISEIRELENIEEHQSVDIATLEDEAQENKIKMKTVEKNMEQQKENMEHLKSV
KVEAENKYDAIKQKINQLSEQADPLKDELNLADSEVDNQKRGKRHYEEKQKEHLDTLNKK
KRELDMKEKELEEKMSQARQICPERIEVKKSASILDKEINRLRQKIQAEHASHGDREEIM
RQYQEARETYLDLDNKVKTLKRFIKLLEEIMTHRYKTYQQFRRCLTLRCKLYFDNLLSQR
AYCGKMNFDHKNETLTISVQPGEGNRAAFNDMRALSGGERSFSTVCFILSLWSIAESPFR
CLDEFDVYMDMVNRRIAMDMILKMADSQRFRQFILLTPQSMSSLPSSKLIRILRMSDPER
GQTTLPFRPVAQEEENERS
NT seq
3300 nt
NT seq
+upstream
nt +downstream
nt
atggccaaaagaaaggaagaaaatttcttctctcctgaaaatgccaaaagaccaagacta
gaatctgagttggaagaagattttgatagagatggtgatgaagatgaatgtacagtgtct
ttcactaatggcacctctaccttgactgcagccgaagttggaataattgagagtattcag
ttaaaaaacttcatgtgccactccatgcttggacctttcaaatttggttcaaatgtcaac
tttgtcgttggaaacaatggaagtgggaagagtgcagtgctcacagctctcatagttggt
cttggtggaaaagcagttgccacaaatagaggatcttctctaaaaggttttgtgaaagat
ggacagaactcggcagatatctccatcacgctgaggaacagaggggacgatgcgtaccgg
gcaaacgtgtatggcgacaccatcgttgtgcagcagcacatcagcatggatggaagccgg
tcttacaagctcaaaagtggaacaggcacggtgatttctacaaagaaagaagaactgatt
gcaattctggatcattttaacatacaggtggataatccagtttctgttttaacacaagag
atgagcaaacagttcttgcagtctaagaatgagggagacaaatacaaattcttcatgaaa
gcaacccaacttgaacagatgaaggaagactactcttacattatggaaacaaaagaaaga
acaaaggagcagataaaccaaggagaagagcgacttattgaactgaagcgccagtgtttg
gagaaagaagaacgatttcagagtattgctggcttgagtacaatgaagacaaatttagaa
tacctgaaacatgaaatggcttgggcagtggtcaatgaaattgaaaagcagttgaatgct
atcagagataatattaaaattggagaagaccgtgctgctcgccttgaacggaaaatggaa
gatcagcaggtcagacttaatgaggcagaaaagaactataaggatattcaagataaacta
gaaaaaattagtcaagagacaaatgcaagagcaccagaatgtatggccctgaaagccgac
ctgactgccaagaaaagggcctttaatgaggctgaggttttatacaatcgttccctaaat
gagtatagagctttaaagaaagatgatgaacagctttgcaaaagaattgaagaactgaaa
agaagtactgatcaatctttggaacctgagcggttggaaaggcaaaaaaagatatcttgg
ttaaaagagaaagtaaagagtttacaggatcaagaaattactgtcaatcaagatattgaa
cagtttcagcaagccatagagaagaacaaagaagaacataccagaattaagagagaagaa
ttagatgtaaagcatacactgaactacaaccagaagcaactgaaggaactgaaagatagt
aaaacggatagactgaaaaggtttgggcctcacgttccagctctgcttgctgcaatagac
gacgctcacaggcgcggacagttcacctataagcctataggccctttaggagcttgcatt
caccttcgggaccctgagcttgctttggctattgaatcctgtctgaaaggtcttctgcag
gcctattggtgtcataatcatgctgatgaaagagtacttcaagcactgatgaaaaagttt
tattcaccagggacctcaaggccacagattattgtttctgagtttcggaaagaaatgtat
gatgtaagacacagagctgcctatcatccagagttcccaacagttctcacagctttagaa
atcgataacgcggttgttgccaatagcctcattgacatgcgggggatagaaacagtgctg
ctaatcaaaaataattctgtagcgcgtgcagtaatgcaatcccaaaggccacccaggaat
tgtagagaagctttcactgccgatggcgatcaggtttttgcaggacgttactattcatct
gaaaacacaagacctaagttcctgagcagagatgtggattctgaaataagtgacctggag
aatgagattgaaaataagaaggctcagatattaaatcttcaacaacatttgtctgccctt
gaaaaggatattaagcaccaggaagaaattcttaaaaggtgccaactacattataaagaa
ttaaagatgaaaattagaaaaggtatttctgaaattcgggagcttgaaaatatagaagaa
caccaatctgtagatatagcaacgttggaagatgaagctcaggaaaacaaaatcaaaatg
aaaacggttgaaaaaaatatggagcaacaaaaggaaaatatggaacatcttaaaagtgtg
aaagtagaagcagaaaacaagtatgatgcaattaagcagaaaattaatcaattatcagag
caagcagatcctcttaaggatgagttaaaccttgcagactcagaagtagataaccagaag
cgaggaaaacggcattatgaagagaaacaaaaggaacacctggacactctgaataaaaag
aaacgagaactggatatgaaagaaaaagagcttgaggagaaaatgtcacaagcaagacag
atctgcccagagcgaatagaagtgaaaaagtcagcatcaatcctagacaaagaaattaac
agattaagacaaaagatacaggcagagcatgctagtcatggagatcgagaagaaataatg
aggcagtatcaagaagcaagagaaacctatcttgacttggacaataaagtgaagacttta
aaaaggtttattaaattgctagaagaaataatgacccacagatacaagacttaccagcag
tttagaaggtgcttaactctacgatgcaaattatactttgacaacttattgtctcaaaga
gcttattgtggaaaaatgaattttgaccacaagaatgaaactctcactatatcagttcag
cctggagaggggaacagagctgccttcaatgacatgcgagccttatctggaggtgaacgt
tctttttccacagtttgcttcattctttctctgtggtccattgccgaatctcccttcaga
tgtctggatgagtttgatgtctacatggacatggtcaaccgaagaattgcaatggacatg
atactcaagatggcagattcccagcgtttccgacagtttatcttgctcacccctcaaagc
atgagctcacttccatcaagcaaactaattaggatacttcggatgtctgatcctgaaaga
ggacaaactacactacccttccgacctgtggctcaagaagaggaaaatgagcgaagttga
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