Sorex araneus (European shrew): 101557735
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Entry
101557735 CDS
T07854
Symbol
USHBP1
Name
(RefSeq) Usher syndrome type-1C protein-binding protein 1
KO
K21881
Usher syndrome type-1C protein-binding protein 1
Organism
sara
Sorex araneus (European shrew)
Brite
KEGG Orthology (KO) [BR:
sara00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
sara03037
]
101557735 (USHBP1)
Cilium and associated proteins [BR:
sara03037
]
Primary cilia and associated proteins
USH complex and associated proteins
101557735 (USHBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
USHBP1_PDZ-bd
Motif
Other DBs
NCBI-GeneID:
101557735
NCBI-ProteinID:
XP_004616928
LinkDB
All DBs
Position
Unknown
AA seq
673 aa
AA seq
DB search
MSARATRPRSRRGRHALPGELDPVVESSEETEVASRSTGPGAGPATDLAQEVKPELQGMD
LEPPLGHSPRGSVHAEADEDGGKVSLELAEPASQTPQAPQAGEPPGPTDVFEKLQDVLCS
LEATATAWRVQPQPQQAEGGGPGTGMPAMEPEAGPGGLQREAAGLAERNAWLRLALESRE
AELARMQAEKETVQREVQELQNFLLTLEPAQPLGQGQGPSSRSEPGSPGAEPWGTRDTPF
PLAQPLLRRLRSDPSTQLLVTPCSVPESHAMEVQLEQLRGSIEKLKCFNRLLSAVLQGCK
GRCEALSMQLGQREAEATVLRLALQDSESCERAYGSLLVLRAAASPRELEVAEQEAQRLL
AQDGDMWQGSLPSPEGSSVDRPTTLEVAAQLQGWIQCLQKHRALLKIPPEPGPTLTPVST
VPRAEAMVQAILDTQPGPALPQLDKIQIQQDLAATRESLADLMLRLQLVRREKRGLELRE
AAMRAQSPAHALLQAQLRWELELLQTGCSGSSSGDTSGAGSSSEDDEEGVTLHPPAVPAG
SQSLDGGWVSQEQDQEKLAQELAASLTRALDLQEQLQALREELEQVVQKGRARRVQSAEL
TRELCKAHSSLVLAFRGAHRKQEEQRRKLEQQVAMMEARHTEELAGLEAVARALGRPPRP
LPSRLPRPGETFL
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcccgggccacacggccccgaagccgccgagggaggcatgcactgcccggggag
ctggacccggtggtggagagctcggaggagactgaagtggctagccgaagtacaggccct
ggagctggcccagccactgacctggcccaggaggtgaagccagaactgcagggtatggac
ctggagccgcccctggggcacagcccccgaggcagtgtacacgcagaagcagacgaggat
ggcggcaaggtctccctggagctggctgagccggccagccagaccccccaggcacctcag
gccggggagcccccaggccctacagatgtgtttgagaagctgcaggacgtgctctgctcc
ctggaggccacggccaccgcctggcgtgtccagccccagccccaacaggcagagggcggc
ggcccggggacagggatgccagcaatggagccagaggcaggtcccgggggcctgcagcgt
gaggctgctggactggcagagagaaatgcgtggctgcggctggccctggagagccgagag
gcagagctggcacgcatgcaagccgagaaggagaccgtgcagagagaggtgcaggagctg
cagaatttcctgctgactctggagcccgcccagcccttgggccaaggccaaggccctagc
tcccgcagtgaaccaggcagccctggggctgagccgtgggggacccgggacacccccttt
cccctcgctcaacccctgctccggcgcctcagaagtgaccccagcacccagctgcttgtc
accccttgcagtgtccccgagtcccacgccatggaggtgcagctggagcagctgcggggc
agcatcgagaagctcaagtgcttcaaccgcctgctgtcggccgtgctccagggctgcaag
ggccggtgcgaagccctcagcatgcagctcggccagcgggaggcagaggccactgtgctc
cgcctggctctgcaggacagtgagagctgcgagagagcctacggcagcctgcttgtcctg
cgggccgcggcgtcccccagggagctggaggtggccgagcaagaggcacagaggctgctg
gcccaggacggagacatgtggcagggctccttgcccagccccgagggcagcagtgtggac
aggcccacgaccctggaggtggccgcgcagctccagggctggattcagtgccttcagaag
caccgggccttgctgaagatccccccagagccgggccccaccctgacgcccgtgtccacc
gtgccccgtgcagaagccatggtccaggccatcctggacacccagcctggtcctgcactg
ccccaactggacaagatccagatccagcaggacctggcagccacccgggagagcttggca
gatctgatgctgcggctgcagctggtgcggcgggagaagcggggcctggagctgcgggag
gcggcaatgcgcgcccagagccccgcgcatgcgctgctgcaggcccagctgcggtgggag
ctggagctgctccagacgggctgctcgggcagcagctctggggacaccagtggcgctggg
agcagcagcgaggatgatgaggagggcgtcaccctgcaccctcccgctgtccctgcgggg
agccagagtcttgatggtggttgggtgagccaggagcaggaccaggagaagcttgcccag
gaactggcagcatccctcacccgggcgctagacttgcaggagcagcttcaggcgctgcgg
gaggagctggagcaggtggttcagaagggaagagccaggcgcgtgcagagcgccgagctc
acccgagagttgtgcaaagctcacagctccctggtcctggccttccgtggtgcccaccgg
aagcaggaggaacagcggcggaagctggagcagcaggtggcaatgatggaggcgagacat
acagaggagctggcggggctggaagccgtggcccgggccctggggagacccccgaggccc
ctgccctcacggcttccgcggccaggggagaccttcctgtaa
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integrated database retrieval system
