Sorex araneus (European shrew): 101558072
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Entry
101558072 CDS
T07854
Name
(RefSeq) LOW QUALITY PROTEIN: nucleoporin p58/p45-like
KO
K14307
nucleoporin p58/p45
Organism
sara
Sorex araneus (European shrew)
Pathway
sara03013
Nucleocytoplasmic transport
sara05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
sara00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
101558072
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
101558072
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sara03019
]
101558072
Messenger RNA biogenesis [BR:
sara03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
101558072
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleoporin_FG2
FapA
GAIN_ADGRA3
PSY3
Nup49_C
Motif
Other DBs
NCBI-GeneID:
101558072
NCBI-ProteinID:
XP_012788962
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All DBs
Position
Unknown
AA seq
595 aa
AA seq
DB search
MATGFSFGTSFGSSTVAAGGTAPGGGFSFSTGASSTPSVGFNFGNLGSSTTPATTSATSG
FGNVLFGSKPTTGLTLRINTGIATTISTGLTLGTPATTSASLTGFSLGFNKPSASATPFT
LPTTSTSAGALSLSSSLISTSAASTGFTXNLGGPADTTTTASTGLSLGVALPDLGGSHFQ
NTNSATSGLEQNELELTLGTTAATSSVGNEGLGGIDFSSSSNKKSDKMRTRPEDSKALKD
ENLPPLICQDVENLQKFVKEQKQVQEEISRMSSKAMLKVQEDIKALKQLLSLAASGLQRN
TLNIDKLKIRTAQELKNAKIALRTQKTPPGLQHENTAPADYFRILVQQFKVQLQQYRQQI
EELENHLATQANNSHITPQDLSMAMQKIHQTFVALAAQLRSIHENVKVLKEQYLGYRKMF
FGDAVDVFKARRVEAKXWQNAPRVTTGPTPFSNMSNSEAIAMAAILTQQRQPAPGPQPSL
GVSFGPPLGSGIGTGLQSSGLGSSDLGGFGASSGFGCSTTGASTFGFGTTNKSSGSLSAG
FGSSSTSEFNFRNPGITASAGLTFGVSNPASAGFGTGGPFLQLKKTPAGNKRGKR
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atggccacgggcttctccttcggcaccagcttcggctccagcacagtggccgccggtggg
actgctcctggtggcggtttctcgttcagcactggcgcgtccagcaccccatctgtgggg
ttcaacttcgggaaccttgggagttcaaccactccagcaaccacatctgcaacttcaggg
tttggaaatgtgctctttgggtctaagcctaccactgggctcactctcagaatcaacaca
ggaatagcaacaactatatctacaggattaacactgggaactccagccaccacctctgcc
tctctgacaggtttcagtctaggtttcaacaagccttcagcatctgcaacaccatttact
cttcctactacttctacctcagctggtgctcttagtctttcatcctctctgatatctact
tcggcagcatccacaggatttactnctaatttgggtggaccagcagataccactacaact
gcatcaacaggcctttctttaggggtggccttacctgatctgggaggttcacatttccag
aatacaaactcggcaacatcaggacttgaacagaatgagttagaattgactttgggaact
acagctgctacttcatctgtgggcaatgaaggccttggtggcatagattttagtagctca
tcaaataaaaagagtgataaaatgcgaacaagaccagaggatagtaaagcactgaaggat
gaaaatctacctcctctgatctgccaggatgttgagaatctccagaaatttgtgaaagaa
caaaagcaagtacaagaagaaattagtagaatgtcttcaaaagcaatgcttaaagtacaa
gaagacattaaagctctgaagcagcttttgtcattggctgccagtggattacagagaaat
actctcaatattgacaaattaaaaataaggactgctcaggagttaaagaatgctaaaata
gctttgagaacccagaaaacaccacctggtctccagcatgaaaatacagctcctgctgac
tatttcagaatcttggttcagcagttcaaagtacagcttcagcagtatagacaacaaatc
gaagaacttgaaaaccatctggccactcaagcaaataactcacatataacacctcaagat
ttgtcaatggctatgcagaaaattcatcaaacctttgtagctctagctgcacaactgcgg
tctattcatgaaaatgtgaaggtgctcaaagaacagtaccttggctacaggaaaatgttt
tttggagatgctgtagatgtgtttaaagccaggcgagtggaagcaaagnagtggcagaat
gcacccagagtcaccactgggcccactcctttcagcaacatgtcaaactcagaggccatt
gccatggctgcgatactgacacagcagcggcagcctgccccagggccacagccatctctg
ggagttagttttggaccgcctttgggctcaggtattggcactggcttgcagtcaagtggc
ttaggttcttcggaccttggaggatttggagctagctctggttttggatgcagcaccaca
ggggcctctacatttggatttggaacaacaaataagtcctcaggaagtcttagtgcaggc
tttggcagctcaagtacatctgagtttaacttcagaaatcctggcatcacggcatctgct
ggtttgacatttggggtgtccaatcctgcgtctgcaggttttggaacaggaggaccattc
cttcagttgaagaaaactccagctggaaacaaaagaggaaaaagatag
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