Sorex araneus (European shrew): 101558108
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Entry
101558108 CDS
T07854
Symbol
HCN3
Name
(RefSeq) potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3
KO
K04956
hyperpolarization activated cyclic nucleotide-gated potassium channel 3
Organism
sara
Sorex araneus (European shrew)
Pathway
sara04929
GnRH secretion
Brite
KEGG Orthology (KO) [BR:
sara00001
]
09150 Organismal Systems
09152 Endocrine system
04929 GnRH secretion
101558108 (HCN3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sara04040
]
101558108 (HCN3)
Ion channels [BR:
sara04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (HCN)
101558108 (HCN3)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Ion_trans_N
cNMP_binding
Ion_trans_2
Motif
Other DBs
NCBI-GeneID:
101558108
NCBI-ProteinID:
XP_004619342
LinkDB
All DBs
Position
Unknown
AA seq
783 aa
AA seq
DB search
MEAEPRPTTTRTSDGVTPGLEAAPPAVPAPATAAAGPIPGSGSGPEPKRRQLGTLLQPTV
NKFSLRVFGSHKAVEIEQERVKSAGAWIIHPYSDFRFYWDLIMLLLMVGNLIVLPVGITF
FKEENSPPWIVFNVLSDTFFLLDLVLNFRTGIVVEEGAEILLAPRAIRTRYLRTWFLVDL
ISSIPVDYIFLVVELEPRLDAEVYKTARALRIVRFTKILSLLRLLRLSRLIRYIHQWEEI
FHMTYDLASAVVRIFNLIGMMLLLCHWDGCLQFLVPMLQDFPSDCWVSISHMVNHSWGRQ
YSHALFKAMSHMLCIGYGQQAPVGMPDVWLTMLSMIVGATCYAMFIGHATALIQSLDSSR
RQYQEKYKQVEQYMSFHKLPADTRQRIHEYYEHRYQGKMFDEESILGELSEPLREEIINF
TCRGLVAHMPLFAHADPSFVTAVLTKLRFEVFQPGDLVVREGSVGRKMYFIQHGLLSVLA
RGARDTRLTDGSYFGEICLLTRGRRTASVRADTYCRLYSLSVDHFNAVLEEFPMMRRAFE
TVAMDRLRRIGKKNSVLQRKHSEPSPGSSGGLMEQHLVQHDRDMARGICGLAPGTGARLS
GKPVLWEPLVHAPLQAAAVTSNVAIALTHQRGSLPLSPDSPATLLARSTRLSVGSPASPL
VPVRAGPLLARGPWASTSRLPALPARTLHASLSRAGRSQVSLLGPPPGGGARRLGPRGRP
LSASQPSLPQRAAGDGSPGRKGSGSERLPPSGLLAKPPGTAQIPRPPVPELATPRGPQLS
ANM
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atggaggcagaaccgcggccgacaacgacgcggaccagcgacggagtgacccccgggctg
gaggcggcaccccccgctgtcccggcgccggcgaccgcggctgcaggtccgatccccggc
tccggctccgggcccgagcccaagaggaggcagcttgggacgctactccagcccacggtc
aacaagttctcccttcgcgtcttcggcagccacaaagcggtggagatcgagcaggagcgg
gtcaagtccgcgggggcttggatcatccacccctacagcgacttccggttttactgggac
ctgatcatgctcctgctgatggtggggaatctcattgtgctgcctgtgggcatcaccttc
ttcaaggaggagaactccccgccttggattgtcttcaatgtcctctctgataccttcttc
ctgctggatctggtgctcaacttccgcacaggcatcgtggttgaggagggggctgagata
ctgctggccccaagagccatccgcacacgctatcttcgcacctggttcctggtggacctc
atctcctccatccccgtggattacatcttcctagtggtggagcttgagccacggttggat
gccgaggtctacaaaacggcgcgagcactgcgcatcgtgcgtttcaccaagatcctcagc
ctgcttcggctgctccgcctctcccgcctcatccgctacatccaccagtgggaggagatc
tttcacatgacctacgacctggcgagcgctgtggtgcgcatcttcaacctcatcggcatg
atgctgctgctgtgccactgggatggctgcctacagttcctggtgcccatgctgcaggac
ttcccctcggactgctgggtgtccatcagccacatggtgaaccactcgtggggccgccag
tactcccacgccctattcaaggccatgagccacatgctgtgcatcggctatgggcagcag
gcgccagtgggcatgccggatgtgtggcttaccatgcttagcatgattgtgggtgccaca
tgctacgccatgttcatcggccacgcaactgcactcatccagtccctggactcctcgagg
cgccagtaccaggagaagtacaagcaggtggagcagtacatgtccttccacaagctgccc
gcggacacgcggcaacgcatccatgagtactacgagcaccgctaccagggcaagatgttt
gatgaggagagcatcctgggggagctgagtgagccgctgcgtgaggagatcataaacttc
acatgccgtggactggtggcacacatgccgctcttcgctcacgccgatcccagcttcgtc
acggctgtgctcaccaagttgcgcttcgaggtcttccagccgggtgacctggtggtgcgc
gaaggctcggtgggcaggaagatgtacttcatccaacacgggctgctcagcgtgctggcg
cggggtgcccgtgacacccgcctcacagacggatcctactttggggagatctgcctgctg
acccggggccggcgcactgccagcgtgcgggcggacacctactgccgcctctactcactc
agtgtggaccatttcaatgccgtgctggaggagttccccatgatgcgccgggccttcgag
actgtggccatggatcgactgcgccgtatcggcaagaagaactctgtgctgcagcggaag
cactccgagcccagtccgggcagcagcgggggcctcatggagcagcacctggtgcagcat
gaccgggacatggcccggggtatctgcggcctggccccgggcacgggtgcgcgactcagc
gggaagccggtgctgtgggagcccctggtgcatgcacccctgcaagcagccgccgtcacc
tccaacgtggccattgcgctgacacaccagcggggctctctgcccctctcccctgactct
ccggccactctcctggctcgctccacccggctctcagtgggctccccggcctccccgctg
gtgcctgtccgcgcaggccctctgctggcccggggaccatgggcgtccacctcccgcttg
cccgccctgcctgctcgcaccctccacgccagcctgtcccgagctgggcgttcacaggtg
tccctgctggggcccccccctggtgggggcgcgaggcggctgggaccccggggaagacct
ctctcagcctcccagccctctctgcctcagcgagcagcaggggatgggtctccgggccgg
aagggctctggaagcgagcgcctgcccccctcagggctgctggccaagcctccagggaca
gcccagatcccccggccaccagtgccggaactggccactccccggggccctcagctctct
gccaacatgtga
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