KEGG   Sorex araneus (European shrew): 101558160
Entry
101558160         CDS       T07854                                 
Symbol
KDM5B
Name
(RefSeq) lysine-specific demethylase 5B
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
sara  Sorex araneus (European shrew)
Brite
KEGG Orthology (KO) [BR:sara00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:sara01009]
    101558160 (KDM5B)
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:sara03036]
    101558160 (KDM5B)
Enzymes [BR:sara01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     101558160 (KDM5B)
Protein phosphatases and associated proteins [BR:sara01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     101558160 (KDM5B)
Chromosome and associated proteins [BR:sara03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    101558160 (KDM5B)
SSDB
Motif
Pfam: PLU-1 JmjC KDM5_C-hel PHD zf-C5HC2 PHD_2 zf-PHD-like
Other DBs
NCBI-GeneID: 101558160
NCBI-ProteinID: XP_004610089
LinkDB
Position
Unknown
AA seq 1386 aa
MGFAPGKAVGSHIRGHYERILNPYNLFLSGDSLRCLQKPNLTTDTKDKEYKPHDIPQRQS
VQPSEMCPPARRAKRMRAEATNIKIEPEETSEARTHNLRRRTGCPAPKCENEKEMKTSIK
QEPTEKKDHIVESEKEKPKSRSKKTTNAVDLYVCLLCGSGNDEDRLLLCDGCDDSYHTFC
LIPPLHDVPKGDWRCPKCLAQECSKPQEAFGFEQAARDYTLRTFGEMADAFKSDYFNMPV
HMVPTELVEKEFWRLVSTIEEDVTVEYGADIASKEFGSGFPVRDGKLKLSPEEEEYLDSG
WNLNNMPVMEQSVLAHITADICGMKLPWLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKT
WYGVPGYAAEHLENVMKKLAPELFVSQPDLLHQLVTIMNPNTLMTHEVPVYRTNQCAGEF
VITFPRAYHSGFNQGFNFAEAVNFCTVDWLPLGRQCVEHYRLLHRYCVFSHDEMICKMAS
KADVLDVVVASTVQKDMAIMIEDEKALRETVRKLGVIDSERMDFELLPDDERQCIKCKTT
CFMSAIACSCKPGVLVCLHHVKELCSCAPYQYKLRYRYTLDDLYPMMNALKLRAESYNEW
ALNVNDALEAKINKKKSLVSFKALIEESEMKKFPDNDLLRHLRLVTQDAEKCASVAQQLL
NGKRQTRYRSGGGKSQNQLTVNELRQFVTQLYALPCVLSQTPLLKDLLNRVEDFQQHSQQ
LLSEEMPSAAKLQDLLDVSFDFDVELPQLAEMRTRLEQARWLEEVRQACLDPASLTLDDM
RRLIDLGVGLAPYSAVEKAMARLQELLTVSEHWDDKAKSLLKARPRHSLNSLATAVKEIE
EIPAYLPSGVALRDSVQKAKDWLQDVEALQVGGRVPVLDTLLELVTRGRAIPVHLDSLPR
LELLVAEVQAWKECAANTFLTENSSYSLLEVLCPRCDIGPSGLKRKQRKAKEALPSGKKK
STRLESLSDLERALTESPETASAMATLGEARLREMEALQSLRLANEGKVLSPAPGADLKV
CLCQKAPAAPMVQCELCRDAFHTSCVAVPSVTQDLQVWLCPHCRRSEKPPLEKILPLLAS
LQRIRVRLPEGDALRYMIERTVSWQHRAQQLLSSGNLKCVHDGVGSGPSSRGQASAALGP
EDAKVSQPAGTASFALPGDRDSRTSYSHSPFSTVRSRIPLHGISPEVNELLMEAQLLQVS
LPEIQELYQALLTKPSPAQQTDRSSPARPSTEKNDCCRGKRDGGINSLERKAKRRLEREG
LSSERWDRTQKMRNPKKKKIKLSHPKDMNSFKLERERSYESARCAETHSLPSDTSYSEQE
ESEDEDAICPAVSCLQPEGDEVDWVQCDGSCNQWFHQVCVGVSPEMAEKEDYVCVRCTVK
DAPSRK
NT seq 4161 nt   +upstreamnt  +downstreamnt
atgggctttgcccctggcaaagctgtgggctcccatatcagagggcattacgagagaatc
ctcaatccctacaacctatttctgtctggagacagtctaagatgtctgcagaagccaaac
ctgaccacagacaccaaggacaaggagtacaagccccatgatattccccagaggcagtct
gtgcagccctcggagatgtgccccccggcccggagagcgaagcgcatgagagcggaggct
acgaatattaaaattgaaccggaagagacatcagaggccagaactcataacctaagacgt
cgaacaggctgtccagctccgaaatgtgagaatgagaaagagatgaagaccagcatcaag
caggagcccactgagaagaaagaccacattgtagaaagtgagaaggaaaagcccaagagt
cggtctaaaaaaaccaccaatgctgtcgacctgtacgtgtgcctcttgtgcggcagtggc
aacgatgaggaccgccttctcctgtgcgatggctgcgatgacagctaccacactttctgc
ctgatccccccgctccatgatgtccccaagggagactggaggtgtccgaagtgtttggct
caggagtgtagtaagccacaagaagcattcggctttgaacaagcggccagggactatact
cttcgtacttttggggaaatggcagatgcattcaaatcggattacttcaacatgccagtc
catatggtacccacagaactggttgagaaggaattttggcggctggtaagcaccatcgaa
gaggatgtcaccgtggaatatggagcagatattgcctcaaaggaatttggcagtggcttc
cctgtccgcgatggaaaactcaaactttctcctgaggaggaggagtacctggacagtggc
tggaacctgaacaacatgccggtgatggagcagtctgtgctcgcccacatcactgcggac
atctgtggcatgaagctcccatggctgtatgtgggcatgtgcttctcctcattctgctgg
cacatcgaagaccactggagctattcgattaactatttgcactggggtgagccaaaaacc
tggtatggagtcccaggatatgctgccgaacacctggagaatgtcatgaagaaattggct
ccggagctctttgtgtcacagcccgatctcctccatcagctcgtcaccatcatgaacccc
aacaccctgatgacccacgaagtgcctgtttaccgaacgaatcagtgtgctggggagttc
gtgatcacgttcccgagagcctaccatagtggttttaaccagggcttcaatttcgctgag
gctgttaacttctgtactgttgattggctaccattaggccgtcagtgcgtggaacattat
cgcttacttcaccgctattgcgtgttttcccacgatgagatgatttgcaagatggcttcc
aaagctgatgttctggatgttgtagttgcttcaactgtccagaaagacatggcaattatg
attgaggatgaaaaggctttaagagaaactgtccgtaaattgggagtaattgattcggag
aggatggatttcgagttgttaccagatgatgagcgtcagtgtatcaaatgcaagaccacc
tgcttcatgtccgccattgcctgttcctgcaagccaggagtgctggtgtgcctgcaccac
gtgaaggaactgtgctcctgtgctccgtaccagtataagctgcggtaccgctacactctg
gacgacctctaccccatgatgaatgcgctgaaactgagggccgagtcctacaacgaatgg
gctttgaatgtgaatgacgctctggaagcgaaaatcaacaaaaagaaaagtcttgtcagt
tttaaagctttaattgaagaatctgaaatgaagaaattcccagacaatgaccttttgcgt
caccttcgcttagtcacacaagatgcagagaaatgcgcctctgttgcacagcagctgctt
aatggcaagcggcaaacgaggtaccgatctggtggggggaaatcccaaaaccagttgaca
gtgaatgagctccggcagttcgtgacgcagctctacgcacttccctgcgtcctcagccag
acgcccttgctgaaggatctcctgaaccgcgtggaagacttccagcagcacagccagcag
ctgctctccgaggagatgcccagtgccgccaagctgcaggacctgctcgacgtcagcttc
gacttcgatgtcgagctgccccagctggccgagatgcgcacccgcctcgagcaggcgcgc
tggctggaagaggtgcggcaggcctgcctggaccccgcctccctgactttagatgatatg
agacgcctcatagacctgggagtgggcctggccccttactcggcggtggagaaggcgatg
gcccggcttcaggagctgctcacggtgtcggagcactgggatgacaaagccaagagtctc
ctcaaggccagaccgcggcactctttgaacagccttgccactgcagtgaaggagattgag
gagatccccgcgtatctccctagtggcgtagctctccgagactccgtgcagaaagccaaa
gactggctgcaggacgtcgaggccctgcaggttggaggacgtgtaccagtattggacaca
cttctagaacttgtcactcgaggtcgagctatcccggtacatctggattctctgccaagg
ctggagttgctagtagctgaggttcaggcttggaaagaatgtgctgctaacacattcttg
actgagaattcttcctattctctcttagaggttctgtgccctcgatgtgatattggccct
tcggggttgaaaagaaagcagagaaaggcgaaggaggctttgccgagtgggaagaagaag
agcaccagattagagagtctgagcgacctggagcgagcgttgacggagagcccggagaca
gcctctgcgatggcgactctcggggaagcccgcctcagagaaatggaagccttgcagtcc
ctcagactagccaacgaagggaaagtgctgtcgcctgctccgggcgcggacctgaaagtc
tgcctctgccagaaggccccggccgcccccatggtccagtgtgaactctgcagggatgcg
ttccacaccagctgtgtggcagtgcccagcgttacacaagacctgcaggtgtggctttgt
cctcattgtcggaggtcggagaagcccccgctagagaagatcctgcccctgctggcctcc
ctgcagcgcatccgcgtgcgccttcccgagggcgacgcacttcggtatatgatcgaaaga
accgtgagctggcagcacagagcccagcagctgctctcctcggggaacctcaagtgcgtg
cacgacggcgtgggctcgggaccgtccagccgggggcaggcctcagcggctctggggcca
gaggacgccaaggtctctcagcccgccggcacagcgtcctttgctctgcctggtgaccgg
gacagcagaacctcgtattcacactctcccttctcgactgtgcggagccgtatccctctc
catggtatcagcccagaagtgaatgagctgttgatggaagcccagctgctccaggtatcc
cttcctgaaattcaggaactttaccaggctctactcacaaagccaagccccgctcagcag
acggaccggagctcccccgccagacccagcactgagaagaatgattgctgccgtgggaag
cgtgatggtggaatcaacagtctggagagaaaagcgaagagacgcctggaaagagagggc
ctctccagtgagcggtgggaccgaacccagaagatgcggaaccccaaaaagaagaaaatc
aaactgagccacccaaaggacatgaacagtttcaagttagagagagagcgtagctatgag
tcagctcgttgcgctgaaactcattccctgccctcagatacatcctattctgaacaggag
gagtctgaggacgaagatgccatctgcccagctgtgagctgcctgcagccagaaggagat
gaggtggactgggtccagtgtgatggcagctgcaatcagtggtttcatcaggtctgtgtt
ggtgtttctccagagatggcggagaaggaagactacgtctgtgtgcgctgcactgtgaag
gacgcaccaagccggaaatag

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