Sorex araneus (European shrew): 101558237
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Entry
101558237 CDS
T07854
Symbol
NPAS1
Name
(RefSeq) neuronal PAS domain-containing protein 1
KO
K09098
neuronal PAS domain-containing protein 1/3
Organism
sara
Sorex araneus (European shrew)
Brite
KEGG Orthology (KO) [BR:
sara00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sara03000
]
101558237 (NPAS1)
Transcription factors [BR:
sara03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
101558237 (NPAS1)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
PAS_3
bHLH_HIF1A
PAS_11
PAS
PAS_4
HLH
bHLH_NPAS4
Motif
Other DBs
NCBI-GeneID:
101558237
NCBI-ProteinID:
XP_004607857
LinkDB
All DBs
Position
Unknown
AA seq
570 aa
AA seq
DB search
MLGTQRAGRWIRMRAACAHCLQAQRKEKSRNAARSRRGKENLEFFELAKLLPLPGAISSQ
LDKASIVRLSVTYLRLRRFASLGTPPWGLRAAAPPAGLAPGRRGPVALITEVFEQHLGGH
ILQSLDGFVFALSQEGKFLYISETVSIYLGLSQVELTGSSVFDYIHPGDHSEVLEQLGLR
TAIPGPPTPPSVPSSSSSSSNSSSSLADTLEIEASPAAAASEAQPQERSFFVRMKSTLTK
RGLHLKASGYKVIHVTGRVRARALGLVALGHTLPPAPLAELPLHGHTIVFRLSLALTILA
CESRISDHMDLGPSELVGRSCYQFVHGQDAARIRQSHVDLLDKGQVATGYYRWLQRAGGF
VWLQSVATVAVNGKSPAERHVLWVSHVLSQAEGGQTPLDAFQLPATVVREDSSSPEPEPL
EPSRKGKLTAPPAPTPVPAPETRSKRIKAEPSPGDTRGLEDSSEEELPGAPALLRPESTS
VIRALKQDLVQPWGPPGDAPPSLLHAGFLSPVVRGLCTPGTIRYGPAELGLMYPHLQRLG
PGPVLPEAFYPTLALPYAGPPGTRVQRKGD
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgcttggcacgcagcgcgcgggccggtggatccgtatgcgcgccgcgtgcgcccattgc
ctgcaggcgcagcgcaaggagaaatctcgtaacgcggcgcgctcgcggcgcgggaaggaa
aacctggaattcttcgagctggccaagttgctcccgctgcctggagccatttccagccag
ctggacaaggcgtccatcgtgcgcctcagtgtcacctacctccgactgcgccgcttcgct
tcgctcgggacgccgccctggggactgcgggccgcggcgccccccgcgggcctcgcccca
ggccgacgcggccccgtggcgctgattaccgaagtcttcgagcagcacctgggtggccac
atcctgcagtccctggatggcttcgtgttcgccctgagccaggaagggaagtttctctat
atctcagagaccgtctccatttacctgggcctctcacaggtggagctgacgggcagcagc
gtcttcgattacatccacccgggggaccattccgaggtgctggagcaactggggctgcgg
acggcgatccccgggcctcccacgccgccctccgtcccctcttcctcctcctcctcttcc
aactcttcttcctcgctggcggacacccttgagatcgaggccagccccgctgcagcggcg
tctgaggcccagccccaggaacgttcgtttttcgtccgcatgaaatccacgctcaccaaa
aggggtctgcacctcaaggcctcagggtacaaggtcatccatgtcacaggccgtgtccgg
gcgcgcgcgctgggcctggtggcccttgggcacacgctaccgcccgccccgctggcagag
ctgccactgcacgggcacacgatcgtcttccgcctcagcctggcgctcaccatccttgcc
tgtgagagcagaatcagcgaccatatggatctggggccctcggagcttgtgggccgcagc
tgctaccagtttgtccatggacaggatgcagccaggatccgccaaagccacgtggacttg
ctggacaagggccaggtggccaccgggtactaccgctggctgcagcgagcgggcggcttt
gtgtggctgcagtccgtggccaccgtggctgtgaacgggaagagcccggcggaacgccat
gtgctgtgggttagccacgtgctcagccaagctgaaggtggccagacacccctggatgcc
ttccagcttccagccactgtggtccgtgaggactcgtccagcccagagcccgagccccta
gaaccttcccggaaagggaaactgactgcgcccccggccccgaccccggtccccgcccct
gagacacggagcaagcgcatcaaagccgagcccagccctggggacacgcgggggttggag
gacagcagcgaggaggagctgcccggagccccggccttgctgcggcccgagtccacgtcg
gtcatccgggcactgaagcaggacctggtgcagccatgggggccgcccggggatgcccct
ccctccctgctccacgccggtttcctgtccccggtggtgcggggcctgtgcacgcccgga
accatccgctatggtcccgcggagctgggtctcatgtacccacacctgcagcggctgggg
cccgggccagtgctccccgaggccttctacccaactctggccctgccctatgccgggccc
ccgggcaccagggtgcaacggaagggggactga
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