Sorex araneus (European shrew): 101558640
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Entry
101558640 CDS
T07854
Symbol
TAP2
Name
(RefSeq) antigen peptide transporter 2
KO
K05654
ATP-binding cassette, subfamily B (MDR/TAP), member 3 [EC:
7.4.2.14
]
Organism
sara
Sorex araneus (European shrew)
Pathway
sara02010
ABC transporters
sara04145
Phagosome
sara04612
Antigen processing and presentation
sara05163
Human cytomegalovirus infection
sara05168
Herpes simplex virus 1 infection
sara05169
Epstein-Barr virus infection
sara05170
Human immunodeficiency virus 1 infection
sara05340
Primary immunodeficiency
Brite
KEGG Orthology (KO) [BR:
sara00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
101558640 (TAP2)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
101558640 (TAP2)
09150 Organismal Systems
09151 Immune system
04612 Antigen processing and presentation
101558640 (TAP2)
09160 Human Diseases
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
101558640 (TAP2)
05168 Herpes simplex virus 1 infection
101558640 (TAP2)
05163 Human cytomegalovirus infection
101558640 (TAP2)
05169 Epstein-Barr virus infection
101558640 (TAP2)
09163 Immune disease
05340 Primary immunodeficiency
101558640 (TAP2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sara02000
]
101558640 (TAP2)
Enzymes [BR:
sara01000
]
7. Translocases
7.4 Catalysing the translocation of amino acids and peptides
7.4.2 Linked to the hydrolysis of a nucleoside triphosphate
7.4.2.14 ABC-type antigen peptide transporter
101558640 (TAP2)
Transporters [BR:
sara02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
101558640 (TAP2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
AAA_21
AAA_30
AAA_29
AAA_15
AAA_23
AAA_25
ABC_ATPase
AAA_16
Zeta_toxin
RNA_helicase
AAA_18
AAA_33
DUF5667
Motif
Other DBs
NCBI-GeneID:
101558640
NCBI-ProteinID:
XP_004617786
LinkDB
All DBs
Position
Unknown
AA seq
703 aa
AA seq
DB search
MGLPDPRPWALLLLADTALLWVLRGSLGALLPGGLTGLWLEGTLRLGGLWGLLGLAGLRG
LRGSPPALLGLLTPLFVSLRALVPGALGAPPLRVATAPWTWLLLGYGAAGLAWAAWAVLS
PPGAPEEQDQDRKNNRALMWRLLKLSSPDLPLLGAAFIFLILAVLGETLIPHYSGRVIDI
LGGDFDPDAFVSAIFFMSLFSIGGSLSAGCRGSTFTLIMSRINLRVREQLFSSLLRQDLG
FFQDTKTGELNSRLNSDTTLMSRWLPLNANVLLRSLVKVVGLYGFMLSLSPRLTLLSLLE
VPLMTAAEKVYNVRHQALLQEIQDAVAKAGQVVREAVGGLQTVRSFGAEEEEVCRYRAAL
ERCRQLRWQRDLERALYLLLRRVLQLGVQVLMLSCGLRQIVAGTLSQGGLLSFLLYQENV
AQYVQTLVYICGDMLSNVGAAEKVFQYLDRRPQLPPSGTLAPSSLQGLVQFQDVSFAYPS
RPDQPVLKGLTFTLRPGQMTALVGPNGSGKSTVAALLQNLYQPTAGQLLLDGEPLHQYEH
HYLHQKVTVVGQEPVLFSGSVRDNITYGLKSCSDEEVMAAARAAKADEFIEEMERGLHTD
VGEKGSQLAVGQKQRLAIARALVREPRVLILDEATSALDVQCEQALQDWMSSGNRTVLVI
AHRLQTIQSAAQVLVLKQGELQEEAQLLEGDDLYSRLVQQRQN
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atggggctccctgacccgcgcccctgggcgctcctgctgctggcggacacggccttgctc
tgggtgctgcggggatccctgggggcgctgctccccggaggcctgaccggcctgtggctg
gaggggaccctgcgactcggggggctctggggactgctcgggctggcggggctgcggggg
ctgcggggttcgccgcccgccctgctcggcctgctgacgccgctgttcgtgtccctgcgg
gccctggtccccggggccctgggcgcgccccctctccgggtggccacggccccctggacc
tggctgcttctgggctacggcgctgcggggctggcctgggccgcgtgggccgtgctgagc
cccccgggagcccccgaggagcaggaccaggaccgcaagaacaaccgagccctgatgtgg
cggctgctgaagctctccagtcccgacctgcccctcctcggggccgccttcatcttcctc
attctcgcggtgctcggggagactctaatcccgcactactcgggccgcgtgattgacatc
ctgggaggggatttcgaccccgacgccttcgtcagcgccatctttttcatgtctctcttc
tccattggaggctcgctatccgctggctgccgaggaagcaccttcaccttgatcatgtcc
agaatcaacctgcgggtccgggagcagcttttctcctcccttctgcgccaggacctcggt
ttcttccaggacactaagacaggggagctgaattccaggctgaactcagacaccaccctc
atgagccgctggctccctctcaatgccaacgtgctgctgcggagcctggtgaaagtggtg
ggactgtacggcttcatgctcagcctgtccccgcgactcacgctcctctctctgctggag
gtgccgctcatgacagccgctgagaaggtctacaatgtccgccatcaggcgttgcttcag
gagatccaggacgcggtggccaaggcgggccaggtggtgcgggaggctgtgggcgggctg
cagacagtgcgcagctttggggcggaggaggaggaggtgtgtcgctaccgggcggccctg
gaacggtgccggcagctgcggtggcagagagacctggaacgggccctctacctgctcctg
cggagggtgctgcagctgggggtgcaggtgctgatgctgagctgtgggctgcggcagatc
gtggcggggaccctgagccagggcgggctgctctccttcctcctctaccaggagaacgtg
gctcagtacgtgcaaaccctggtgtacatatgtggggacatgctgagcaacgtgggggct
gcggagaaggtgtttcagtacctggacagacggccacagctgcctccttccggcacactg
gctccgtcctctctgcagggcctggtgcaattccaagatgtctcctttgcttatcccagc
cgccctgaccagcctgtgctaaagggactgacattcaccctgcgtcctggtcagatgacc
gcactggtggggcccaacgggtccgggaagagcaccgtggctgcactgctgcagaatctg
taccagcccacggccggccagctgctgctggatggggagccccttcaccaatatgagcac
cactacctgcaccaaaaggtgactgtggttgggcaggagccggtgctcttctctggctct
gtgagggacaatatcacctatgggctgaagagctgcagcgatgaggaggtgatggccgct
gcccgggccgccaaagctgatgagttcattgaagagatggaacgtggactgcacacagat
gtcggggagaaagggagtcagttggctgtgggacagaaacaacgcctggccattgcccgg
gcccttgtgcgggagccacgagtcctcatcctggatgaagccactagtgccttggacgtc
cagtgtgagcaggccctgcaggactggatgtccagcgggaaccggacggtgctggtgatc
gcgcaccggctgcagaccatccagagcgccgcccaggtcctggtgctgaagcagggagag
ctgcaggaggaggcgcagctgctggagggcgacgacctctactcccgcctggtgcagcag
cggcagaactga
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