Sorex araneus (European shrew): 101558852
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Entry
101558852 CDS
T07854
Symbol
DIS3
Name
(RefSeq) exosome complex exonuclease RRP44 isoform X1
KO
K12585
exosome complex exonuclease DIS3/RRP44 [EC:3.1.13.-]
Organism
sara
Sorex araneus (European shrew)
Pathway
sara03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sara00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
101558852 (DIS3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sara03019
]
101558852 (DIS3)
Messenger RNA biogenesis [BR:
sara03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
101558852 (DIS3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNB
OB_Dis3
PIN_4
Rrp44_CSD1
Rrp44_S1
CSD2
OB_HELZ2
Toxin_R_bind_C
Motif
Other DBs
NCBI-GeneID:
101558852
NCBI-ProteinID:
XP_004604061
LinkDB
All DBs
Position
Unknown
AA seq
958 aa
AA seq
DB search
MLKSKTFLKKTRAGGVMKIVREHYLRDDIGCGASGCSACGAAHEGPVLEPQPLEPASSLC
PRPHYLLPDTNVLLHQIDVLEDPAIRNVIVLQTVLQEVRNRSAPVYKRIRDLTSNQEKHF
YTFTNEHHRETYIEQEQGENSNDRNDRAIRVAAKWYNEHLKSLSSENQLQVVLITNDRKN
KEKAVEEGIPAFTCEEYVKSLTANPELVDRLACLSEDGNEIESGRIIFSEHLPLSKLQQG
IKSGTYFQGTFRASRENYLEATVWVHGDAEENKEIIIQGLKNLNRAVHEDIVAVELLPRH
QWGAPSSVVLQDEGQNEDDVEKEEEKERILKTTVSEKMLKPTGRVVGIIKRNWRPYCGML
AKSDIKESRRHLFTPAEKRIPRIRIETRQASTLEGRRIIVAIDGWPRNSRYPNGHFVRNL
GDVGEKETETEVLLLEHDVPHQPFSQAVLSFLPKMPWGITEQDMKNREDLRHLCICSVDP
PGCTDIDDALHCRELDNGNLEVGVHIADVSHFIRPGNALDQESARRGTTVYLCEKRIDMV
PELLSSNLCSLRCNVDRLAFSCIWEMNHNAEILKTRFTKSAINSKASLTYAEAQMRIDSA
SMNDDITTSLRGLNKLAKILKKRRIEKGALTLSSPEVRFHMDSETHDPIDLQTKELRETN
SMVEEFMLLANISVAKKIHEEFSEHALLRKHPAPPPSNYEILVKAAKSKNLEIKTDTAKS
LADSLDKADSPIFPYLNTLLRILATRCMMQAVYFCSGMDNDFHHYGLASPIYTHFTSPIR
RYADIIVHRLLAVAIGADCTYPELTDKHKLAELCKNLNFRHKMAQYAQRASVAFHTQLFF
KSKGIVSEEAYILFVRKNAIVVLIPKYGLEGTVFFEEKDKPKPRLIYDDEVPSLKIEDTV
FHIFDKVKVKIMLDSSNLQHQKIRMSLVEPQIPGVSIPADALNVDTNEPEKKKKKLEK
NT seq
2877 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagtccaagactttcttgaagaagacgcgggcgggcggcgtgatgaagatcgtg
cgggagcactacctgcgggacgacatcggctgcggggcgtccgggtgctcggcgtgcggc
gcggcgcacgaggggcccgtgctggagccgcagcccctggagcccgccagcagcctgtgt
ccgcgcccacactacctgctgcccgacaccaacgtcctgctgcaccagattgatgtcctt
gaggaccctgccatcagaaatgtgatcgtgcttcagactgtccttcaagaagtgagaaat
cgcagcgcaccggtgtataaacgaatccgagacttgactagtaaccaggagaagcatttc
tatacgttcactaatgagcaccatagggaaacttacatagaacaagaacagggggaaaat
tcaaacgacaggaatgatagagccattcgcgtggctgccaagtggtacaatgaacatctg
aagagcttatcctcagagaaccagctgcaagttgtcctcataacgaatgacagaaaaaac
aaagagaaagccgtagaagagggaataccagccttcacctgtgaagagtatgtaaagagc
ctcactgctaatcctgaacttgtagaccgtcttgcttgtttgtctgaagatgggaatgaa
atagaaagtggaagaataatattttcagagcatcttcccttaagcaagttacaacaaggc
ataaaatcgggtacctactttcaaggaacatttagagctagcagggaaaattacttagaa
gctacagtatgggtccatggagatgctgaagaaaataaagagataattatccaaggactt
aaaaatttaaaccgggccgttcatgaagacattgtggccgtagagctgctcccccggcac
cagtggggagcaccatcctcggtggtcttgcaggatgaggggcagaatgaagatgatgtg
gaaaaagaagaggagaaagaacgcattcttaagactacagtcagcgagaagatgttaaag
cctaccggcagggtcgtgggcatcataaagcggaactggaggccgtactgcggcatgctg
gccaagtccgacatcaaggagtcacgaagacatctttttacacctgctgagaagagaatc
cctcgaattcgcatagaaacccgacaggcgtctaccttagagggccggagaattattgtt
gctattgatggctggcccagaaattccagatacccaaatggacactttgtaagaaattta
ggtgatgttggagaaaaagaaactgaaacagaagtcttgttactcgagcatgacgttcct
catcagcctttctcacaggctgtcctgagcttcctcccaaagatgccttggggcattacc
gaacaggacatgaaaaaccgagaagatctgagacatctatgcatttgtagtgtggatcca
cccgggtgtactgatatagatgatgctctacattgcagagaacttgacaatgggaatttg
gaggtcggtgttcatattgctgacgtcagccattttattcgaccaggaaatgctttggat
caagaatcagccagaaggggcacaactgtgtatctttgtgaaaagagaatcgacatggtt
ccagagctgcttagctccaacttgtgctccctaagatgtaatgttgacagattggccttt
tcatgtatttgggaaatgaatcacaatgctgaaattctaaaaactaggtttaccaaaagt
gccattaattcaaaggcttccctgacatatgctgaagctcagatgagaattgattcagca
tctatgaatgatgacattaccacaagtctccgtggactaaacaaactagcaaaaattttg
aaaaaaagaagaattgagaaaggcgccctgacactttcttctccagaagttcgattccac
atggacagtgaaactcatgatcctatagatctgcagaccaaggagcttagagaaacaaac
tccatggtggaagagttcatgttactcgccaatatttctgttgcaaaaaaaattcatgaa
gaattttctgaacacgctctacttcgaaaacatcctgctccccctccatcaaattacgaa
attcttgtgaaagcagctaaatcgaagaatttggaaattaagactgatacagccaagtct
ttggcggactccctggacaaagctgattcccctattttcccatatctcaacacgctgtta
agaatattggccactcgctgtatgatgcaagcagtgtacttctgctctggaatggataat
gattttcatcactatggcttagcatccccaatctatacacattttacctcgccaatcaga
aggtatgcagacatcattgttcaccgattgttggctgtagctattggagctgactgtact
tacccagaactgacagacaagcacaagctcgcggaattatgcaaaaatctcaatttccgt
cacaaaatggctcagtacgctcagcgagcttccgtggctttccacacccagttatttttc
aaaagcaaaggaatagtgagtgaagaagcatatattctatttgtaagaaagaatgcaatt
gtggtattaattccaaaatatggtttagaaggtacagtcttttttgaagaaaaggacaaa
ccaaagccacgacttatttatgatgatgaggtaccttcacttaaaatagaagacacggtg
ttccatatatttgataaagttaaagtgaaaatcatgttagactcatctaatctccagcat
cagaaaatccgaatgtccttggtagaaccacagattccaggagtaagcattcctgctgat
gctttaaatgtggacactaatgagccagagaaaaagaaaaagaagcttgaaaaatag
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