Sorex araneus (European shrew): 101559020
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Entry
101559020 CDS
T07854
Symbol
CFAP54
Name
(RefSeq) cilia- and flagella-associated protein 54
KO
K25553
cilia- and flagella-associated protein 54
Organism
sara
Sorex araneus (European shrew)
Brite
KEGG Orthology (KO) [BR:
sara00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
sara03037
]
101559020 (CFAP54)
Cilium and associated proteins [BR:
sara03037
]
Motile cilia and associated proteins
Sperm associated proteins
101559020 (CFAP54)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CFAP54_N
fn3
PqiA
Motif
Other DBs
NCBI-GeneID:
101559020
NCBI-ProteinID:
XP_012791569
LinkDB
All DBs
Position
Unknown
AA seq
3099 aa
AA seq
DB search
MAARGASQASPSFSSPSRESRSGPLPPPSPSSAAVSKSPLDSQASSSSSPPRAGSAQDES
LPLAVFYGPLDAKNPLLASCEKEIRELLGFVKRKKTLATTEEQKYEFQRRCATRLFNIWT
KYAPRLPADYYNENLLKVGNSLYEAKEYKLALLQCYGRYLQQFSADFDENKADVNQFKTV
FFPKGFGDKTAAQTFQALSGKNICSYQLVCDNDVNLQNQESVAHCLRILSSLRLLMQVAL
PHEHLCWIVFNGTIYIYTICRKLMVIGQSAKALEYLLWASICMESSVPLLSVRYLTWRAT
LYTAVCQCYYDSQAAIHGETFARRGLAKIDELRQLELMSSSQSQQESRNCYREATIKMAV
MIFKRGVFESRRKNKAYLRPKLRINIKETQALSWPSTITERLLDEMFDSTASRFLAVLEA
LSDPNRRTLQTVPVAIDEIEIREIVTELFIAGRTLLLVSNMDKEGILDFPVTSFLKLLIG
GKNVISLDAALKFTKLAFNYEEWSLFESSAGQILEFIQGRDEPESKKAEKDLILLVVVEP
LINIKKSKGTILPLENYKEGLSAQDFVKKSVLHNTCVKTCTYSEDIFHLAAVLYSCVCNS
PQNIQPDKEIVVDMIMFLWQKCKFGIQRLNIPKNDYAKFTQKISSNKWIYLLWQINEVIQ
CYRMEDIDIVMVAEVTLRISEILEFLGNPQRRFKKSLEKRIEEFLGTPKGSPEILPILKK
KPIEQLFLAYTLLDKTINGINLHCMLTNLSDGSSAIDHCYTKYPHADGDIHKPVTTNTFI
MDLHVELIRAQHRIATLLLDKLNVLQIPEVSEKIPTRAPEKPKQSKNPDCFTELTVMNKI
RKNKISKAIFLIQKALLIFEKDTTCIFSQEFLMEAYSLIEKAEMEQNALYLCQKCLESSE
RKESKVPPPPLLLSRTHCSVTLKPAPFTTNVKVSWYSILGCKAEGSFGKVRLNNNHLPNS
GEMIPADGKTVFEVKGLETNEKYIFAVAAYSSSGKLIGDSIGESTKPILIYPPLSTVTTR
MFLTQAAYQIGEYELAKKIFSPVWDYFVASPPHDEKSIISLNNIMTITQRRLYSDILADT
PSTLLYLFLRNIFVISDIKVKEENLFCDNIKGNEISPSQNIARLVECEKVLVALELSNYL
NDSGFALQAVIQCYGLLAPIIFHNIVLVPVVQILIKCLVVLQALPNVLQSKKNVASFESI
QHMIACSIYYLIKILRSWREYDLAVIIINYGKRMLDITPGCKLFGYSDREEVLEEVISKK
ILVGKPKKPLQLLVPEKINEQLVMLETHLLKLVKQVATCELSGAEDPIFLYPIVLNWPVK
GAAKEVLKFKHRPRFLEFFTQIMLKCLNDEKFHLVLEITNPVTDFLRRRNESLTGMRRYR
YKENILGKKGQKSVKYKAVIMEIGRTDTVIRKRTKKRETLRDFFARNPNIFELMEQERNR
RNDVRKAAQKFLISSLSPLILRYIKRKRFHQICTEELPWRAQMNLYLAIAYYNLFLTKLA
ERIKGKCYLHTFFSFQVCDPDMFSLSNSGTLLPTCKLSSKYYEVMIDFLLTSKKQKANLP
NDAEEFSAFINAKLNEENVTKPQNTHKIDSQMGLNYKEKERGNMTMLDNFTKIFLFCRRA
MVLAHRGGYWTLLQNCCRTFWNITQELQLFLKQTTNMSKIFPVSQDGFLCTIILPFYFGA
ELLIDMLLELQNVNAIKVMEEKEEFSVPSCYGNIRTDNGGSSLSFEQPLDDVNMADLKWI
RDYVLKSLELLYQVEKWETLVSLAMQFNALSHERYTEQVTPLLVYAQHQLLLRINRCKDP
DITQQACVRYEAEHGEKITYKNFIGTQLKIRPSIKKDLSPAIIKEITQDFIYSEYDLAKK
LVCVPVDVTDTLRYFRETLKKSKYHNRCIRHSRKLLSLFLAQLQDVLETSNQRSLKVQAL
HELGNLLIFAEKKRAALKCWSQALDDIFRKPNVLHTWKEFGPSPTSATNSYTPPQFKDYS
EEFLSKVDIWGCLQGAVISAKIAQFIETVDVSKRTNCCILSALLFQGLLRTTHPHPKADR
CYAQYEVTQLLPGVELFSDRYRADICTVIASLYYVIRELHFANHNLIILPLLALYQYFVS
VICQDLVRNLEARILKIEVLIDLRFFSEAFSEMMYIFYGKNMPSSIPAGYKPFGRVKIFQ
SFDTGKSLYNKENIQALDEIISKGMPPILTMIGQQHLLNKYSFVKAYFLINLAATINCIP
EYITKFPLNPEKCKVNTLSLRELILREEGSSVLQLTKPRDDVILCIIKSVLLTEAEDKLN
SLLVEVDHSAHKSLAQYSAGELEIVVEAQLQLAAVALQRHRTAYSSAIVFSILKLLQDSK
LFKQKVSSEGRESFISTPTSVCMSSKDEEFLDSISLHSREYFNIHLWLRCCLALVTAFVA
QVRGIGIITENDLTDVGSLINDVFMEAKNADDKELQAEFLMQAVIIGLQEKHLKTEIITK
LQDIIQLLEGNAFISPRSYLTLVRSMLLMDDLTKAEKFQDASSKTDKLHLLAQCHSILIE
QMLVFGETIEFPVSNTDYASPIQPLKNIYLPHIMLLAKTKMRIGHTLAKQVCQSSKKKDS
SRWLPSLHLLQIALKLCKTTVTEEHEVEAEILFQKGKIERQMFMEDKSLPSNFESLFEAI
QLSLKNDQNSGLIRDSYLEMAILFLHLLKLRNKLSVSPSAFVAPVRRYSSLKDQLGNRLE
MYSSLAWIAIRAASQVSKAVLAVNQHFGKNNSRIDKVSQDTIPTIPEFASMDLFSSYTDY
LLGNHQVVSQTGCNQSVFYQSDDWSDNTDTTKKAETKVDVTWILLLRYYIHLQRTNNMSK
LLASLKSETGNYVQVDSLFTSLFNSALILRQKEMHCFLKKFLQLYSSSCIDEFPRELLQD
WENLLSSDRNLFESSGKAYRNTRCFSLVVYEPFVPAVDKTVISTDMATQALNKELCFQWY
IPPLEKPPRDTEPMVLLLYAYNLKPMKISDVKCSTYNNASVGSLWVPLNRVISIHEKLSN
LTQIAEISLPTSSEIISDEEEPEEEMDRLVDKDIELMVLECCSNILSLFLNEKDVSPLSK
VPFVISLKSILDLERLFDLANGGVISKGSLFQWILSLVP
NT seq
9300 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgcggggcgcttcccaggcgtccccctcgttctcttctccctcccgggagtcg
cggtccggcccgctgccgcccccatccccgtcctcggccgcggtctccaagtcgcccctg
gactcccaggcgagctcttcgagctcaccgccgcgcgcgggaagcgcccaggacgagtcg
ttgcccctcgcggtgttttacggtccgctcgatgcgaagaacccgctcctggcctcgtgt
gagaaggagatccgggagctgctaggctttgtgaagagaaaaaaaactttagcaaccacc
gaggaacagaagtacgagttccagcggcgctgtgctactcgtttgtttaatatctggacc
aaatatgcccctcggttgcctgctgactattacaatgaaaaccttctaaaagttggaaat
agcctttatgaggccaaagaatacaaattggcccttttacagtgctatgggagatatctt
cagcagttcagtgctgactttgatgagaataaagcagatgtgaatcaattcaagactgtc
ttttttccaaaaggctttggagacaaaactgctgcacaaacatttcaagctttaagtggc
aaaaatatttgcagctaccagctggtctgtgacaatgatgtaaacctgcagaaccaggag
tctgtggcccattgtctgcggatcttgtcctcccttcgactcctcatgcaagtggctctt
ccccatgagcacctctgctggattgttttcaatggtactatttacatttacacaatttgt
agaaaactgatggtcataggccagtctgccaaggctttggaatatcttctgtgggctagc
atatgtatggaatcctctgtcccactcctctctgtcaggtatttgacgtggagagctact
ctctacactgctgtctgtcagtgctactatgatagtcaagctgctattcatggagagaca
tttgctcggcgtggtttagctaaaattgatgagttaaggcaactggaattaatgagttct
tcacaatcacagcaagaatccagaaactgttatagagaggccacaataaagatggcggtg
atgatcttcaaaagaggagtatttgaatctagaaggaaaaacaaagcttacttaagacca
aaattaagaattaacataaaggaaacacaagctctttcatggccgtctaccatcacagaa
cgtctcttggatgagatgtttgacagcactgcgtcccgctttctggctgtcttggaagct
ctttctgatccaaatagacgaacactacaaactgttccagtggctatagatgaaatagaa
attcgtgagattgtcacagagctattcatagcaggaagaacgcttttattagtatcaaat
atggataaagaaggaatccttgattttcctgtgacatccttcttgaagctacttataggg
gggaaaaatgttatttctctggatgcagccttgaaatttacaaaattagcttttaactac
gaggaatggagtttgtttgaatcttcagctgggcagattcttgaatttatccaggggcgg
gatgagccagagtcaaagaaagcagagaaggatttaattcttcttgttgtagtagaacct
ctaatcaatataaagaaaagcaaaggtacaatcctgcctttggagaactacaaagaaggc
ctgtcagctcaagattttgtaaaaaaatctgttttgcataatacttgcgtgaagacttgt
acatattcagaagacattttccatctggcagcagtgttgtattcctgtgtttgtaacagt
cctcagaatattcagcctgataaagaaatcgttgtggacatgataatgttcctctggcag
aaatgcaaatttggaattcaacggctcaatataccaaaaaacgactatgcaaaattcacc
cagaaaatcagttctaataaatggatttatcttctgtggcagatcaatgaagtaattcaa
tgctacagaatggaagacattgacatcgtaatggtggcggaagtcacattacggattagt
gaaatattggagtttttaggaaacccccaaagaaggtttaaaaagtctctagagaaaaga
atagaggagttccttgggactccaaaagggagtccagaaattcttccaatattaaagaaa
aaacccatagaacaattatttttggcttatacacttcttgacaaaacaattaacggaata
aatttacattgcatgttaactaacttgtccgatggatcgtcagcgattgaccactgctat
accaagtacccccatgctgatggagacattcacaaaccagttacaacaaatactttcatt
atggatttgcatgttgaactaattcgagctcagcatcgaatagccactttgctccttgat
aaattgaatgttttacagattccggaagttagcgaaaagatacctaccagagctccagag
aagccaaaacaatccaaaaaccctgattgttttacagaattaactgtaatgaataaaata
aggaagaataagatatccaaagcaattttcttgattcagaaagctcttttaatatttgag
aaagatacaacctgcatattttcacaagaatttttaatggaagcatactctttaattgag
aaggctgaaatggaacaaaatgctttatatttatgtcagaaatgtttggaaagttctgaa
agaaaagagagcaaagtccctcctccacctctcctgttgtcccgaactcattgttctgtg
accttgaaaccagctccatttactacaaatgttaaggtctcctggtactccattttgggt
tgcaaagctgaagggagctttgggaaagttaggttaaacaataaccaccttccaaactca
ggagaaatgataccagctgatggtaaaaccgtttttgaggtgaaaggattagaaaccaat
gaaaaatatatatttgcagttgctgcctattcttctagtgggaagctcatcggtgattct
attggggagtcaacgaaaccaattctgatttatccacctctttccactgttactacccga
atgttcttgacacaggcagcctatcagattggtgaatatgagttggctaagaaaattttt
tcaccagtgtgggactattttgttgcttcaccacctcatgatgaaaaatctattatttct
ttaaataatataatgactattacacagagaagattatattcagacattttggcagataca
ccttcaaccctattgtacctttttcttagaaacatttttgtaataagtgacattaaagtt
aaagaagagaatcttttctgtgataatattaaaggcaatgagatttcccctagccaaaat
attgctagattggttgaatgtgagaaagtattagtggctctggaacttagcaactaccta
aatgattccggttttgcccttcaagctgtgatccagtgttacggtctccttgctcctata
atctttcataatattgttctggtgcctgttgtacagatcttgataaagtgtttggtggtt
ttacaagcacttccaaatgtcctccagtcaaagaaaaatgttgcaagttttgaaagcata
cagcatatgatagcttgttctatctactacttaataaagattctacgctcgtggagggaa
tatgacctcgcagtaatcattataaattatgggaaacggatgttggacatcacgccagga
tgcaaattgtttggttatagcgaccgagaagaagtcttagaggaggtaatctctaagaag
attttggttggcaagcccaagaaaccactgcagctcttagtacctgaaaagataaatgag
cagttggttatgttggagacccacctactcaaactggtaaagcaagttgctacatgtgaa
ctctctggagcagaggaccccatctttctttaccctatagttttaaattggccagtcaaa
ggtgctgcaaaagaagtcctgaaatttaaacacagacccagattcctggaattctttaca
caaattatgctaaaatgcttgaatgatgaaaaatttcatctcgtgctggaaataacaaat
ccggtcactgatttcttgagaaggaggaatgaatctctaactggaatgagaagatacaga
tataaggaaaatattttgggtaaaaaggggcaaaaatctgtgaagtataaagctgtgata
atggaaattggaagaacagatacggttataagaaaaagaactaagaaaagggaaacacta
agagatttttttgccaggaatccaaatatttttgaactgatggaacaagaaagaaatagg
agaaatgatgttagaaaagcagcgcaaaaattcctgataagtagcttgagtcctttaata
ctgaggtatattaagagaaagaggttccatcaaatatgtactgaggaacttccctggaga
gctcagatgaacctgtatctggcaattgcctattacaacttgtttttgacaaaactggca
gagcggataaaaggaaaatgctatttgcatacatttttcagtttccaagtctgcgatcct
gatatgttctcattatctaattcaggaacactattaccaacatgcaaattatcttctaaa
tactatgaagtcatgattgattttcttctgacatctaaaaaacagaaggccaatttacca
aatgatgcagaggaattttcagcatttattaatgcgaaattgaatgaagaaaatgttacc
aagccacaaaacactcacaaaattgactctcaaatgggtttgaattataaggagaaagaa
cgagggaatatgactatgctggataattttacaaaaatctttttattttgcaggagagca
atggttcttgctcatcgaggtggctattggacactgcttcagaactgctgccggaccttt
tggaacattactcaggagctacagttatttcttaaacagaccacgaatatgtctaaaata
tttcctgttagccaggatggtttcctctgcaccattattttgcctttctattttggagca
gaattacttatcgacatgttactagagttacagaatgttaatgctattaaggttatggaa
gaaaaggaagagttcagtgttcccagctgctatggaaatattaggactgataatggtggt
tctagcctttcgtttgagcaacctctggatgatgtgaatatggctgacttgaaatggatt
cgtgactatgtattaaaatctttggaacttttgtatcaagtggaaaaatgggaaacatta
gtatcacttgccatgcagttcaatgccctttcacatgagagatacacagaacaagtgaca
ccactcttggtgtatgcacagcaccagcttctactaagaataaacaggtgcaaggaccca
gatattacccaacaagcttgtgtaagatatgaagctgaacatggagaaaagataacctac
aagaatttcattggaacgcaacttaagattaggccttcaatcaagaaagatttatcgcca
gcaattatcaaagaaattacacaagattttatctattcagagtacgacctggccaaaaaa
cttgtctgcgtgcctgtggatgtgacagacactttgagatatttccgggagaccttgaaa
aaatccaaatatcacaacagatgcattcgacacagcagaaagttgctttcattatttctt
gcccagttacaagatgttctcgaaaccagcaatcaaaggagtcttaaagttcaggcattg
catgaacttggaaatcttctcatctttgctgaaaagaaaagagccgctttaaaatgttgg
tctcaagctctcgatgacatattcagaaaaccaaatgtgttacatacatggaaagagttt
ggcccctcacccaccagtgccaccaatagctacactcctccacagttcaaagactacagt
gaagaatttctgtcaaaagttgacatttgggggtgtttgcaaggagcagtgatatcagca
aagatagcacagtttattgagacagtggatgtgagtaaaagaaccaactgctgcattttg
tctgcattactctttcagggtttgcttagaaccacacatccacaccccaaagctgaccgt
tgctatgctcagtatgaagtcactcagctccttccaggcgttgaacttttctcagacaga
tacagggctgatatttgcaccgtgattgcaagtctctattatgtaatccgtgagctgcac
tttgctaaccataacctcataattctgcctctccttgcattgtatcagtattttgtctct
gtaatttgtcaagacttagtcagaaatctagaagcaagaatcctcaagatagaggttctt
atagatttaagattcttttctgaagccttttctgagatgatgtatattttttatgggaaa
aatatgccttcctccatacctgctggatataaaccctttggaagagtgaagatatttcaa
tcatttgatacaggaaaatctctttacaataaagaaaacatacaggcacttgatgaaata
ataagtaaaggcatgcctccaattctgactatgattggccaacaacatctcttaaataag
tattcttttgttaaggcatactttttaataaatttggccgcaacaattaattgtattcca
gaatatataacaaaatttcctttgaatcctgagaagtgcaaagtaaatacactgagcttg
agagagttaattttaagagaagaaggaagttcagttttacagcttacaaaaccaagagat
gatgtgattctttgtataataaagtccgtcttactgacagaggctgaagacaagctaaac
agccttttggtagaggtggatcattcagcgcataagagcctcgcccagtattcagcgggt
gagctggagattgtggtggaggcccagctccagctggctgcggtcgccttgcagagacac
cgcacggcctacagttctgcaatagtattttccatacttaaacttcttcaggattccaaa
ctttttaaacagaaggtatcatcagaaggaagagaaagtttcatctctacaccaacttct
gtatgtatgagttcaaaagatgaagaatttttagattctatttccctccattctcgagaa
tatttcaatattcatttgtggctgaggtgctgtctggcattggtgactgcatttgtggca
caagttcgtggcattggtataataacagagaatgatttgactgatgtggggagcctcatc
aatgatgtgtttatggaggccaagaatgcagatgacaaggagctccaggcagaattcttg
atgcaagctgtaatcattggtctacaagaaaagcatttaaagacagagatcataacaaag
cttcaggatataatacagttgcttgaaggaaatgcgtttatttctcctcgatcttattta
accctggtgagaagcatgcttttgatggatgacctaacaaaagctgagaaattccaggat
gcctcttcaaaaacagacaaactacatttgttggctcagtgccatagcattctcattgaa
cagatgctagtttttggagagacaattgaatttcctgtatcaaacactgactatgcgagt
cccatacaaccattaaaaaatatctatcttccacatatcatgttgttggccaaaacaaaa
atgagaattggacataccttggccaagcaagtatgccaaagtagtaaaaagaaggactct
tctaggtggttaccttctcttcatcttcttcaaatagcattgaaactctgtaagacaaca
gtaacagaagagcacgaggtagaagctgagatcctttttcagaagggcaaaatagaacgt
caaatgtttatggaagataaatcattaccttcaaactttgagagtttatttgaagctata
cagctcagcttgaaaaatgatcaaaactcagggttgatacgagactcctacctagagatg
gccatattatttttgcacttactgaagttaaggaacaagctttcagtgtcaccatcagca
tttgtggctcctgtcagaagatacagttctttgaaagatcagttgggaaataggctagaa
atgtacagctcattggcctggattgcaataagagctgcttcccaggtcagtaaagctgtg
ctggcggttaaccaacattttggaaagaataattctagaattgataaagttagtcaagac
acaataccaaccatcccagagtttgcctcgatggatcttttctcttcctacacagattac
ttgcttgggaaccaccaagtagtctcccagactggatgtaaccaaagtgtattctaccaa
agtgatgactggagtgacaacacagacacaacaaaaaaggctgagaccaaagtggacgtt
acctggattcttctgttgcgctactacattcacctgcagagaactaacaatatgagcaaa
ttgctagcatctttaaagtcagaaaccgggaattatgtgcaggttgacagtctcttcaca
tcccttttcaactctgcattgattttgcggcaaaaagaaatgcattgtttccttaaaaaa
tttttacaattgtattcttcctcttgtattgatgaatttccaagagaattacttcaagat
tgggagaatttactttcttcagatagaaacttatttgagtcatcaggcaaggcttataga
aacaccagatgcttctctctggtagtttatgaaccgtttgtgcctgccgttgataaaaca
gtgatatcaacagatatggcaacacaagctctaaacaaagaactttgttttcaatggtac
attcctccactggaaaaacccccaagggatacagaacctatggttttattgttgtatgca
tataatttaaagcccatgaagatttcagatgtgaaatgttccacttacaacaatgcatct
gttggctctctctgggttccactgaacagagttatttcaattcatgaaaagctatctaat
cttacacaaattgctgaaatttccttgccaacaagctctgaaattatttcagatgaagag
gaacctgaggaagaaatggatagattagttgataaagatatagaactcatggttcttgaa
tgttgctcaaatattttaagcctgtttttgaatgaaaaagatgtatcaccactatccaag
gtcccatttgtcatctcactgaaatctatattggatcttgagagactttttgatcttgct
aacggtggtgtcatatcaaaaggaagcctgttccagtggatattgtctcttgttccctga
DBGET
integrated database retrieval system
