Sorex araneus (European shrew): 105943464
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Entry
105943464 CDS
T07854
Symbol
COL10A1
Name
(RefSeq) collagen alpha-1(X) chain
KO
K19479
collagen type X alpha
Organism
sara
Sorex araneus (European shrew)
Pathway
sara04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
sara00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
105943464 (COL10A1)
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Paralog
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Motif
Pfam:
Collagen
C1q
BclA_C
Motif
Other DBs
NCBI-GeneID:
105943464
NCBI-ProteinID:
XP_012791208
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All DBs
Position
Unknown
AA seq
690 aa
AA seq
DB search
MLPHTALLLLMYLNLVYGRFHGQQYQTPTGIKGPLPNTGTQFFIPYAIKSKGVSERREPG
VPGPPGPPGPRGYQGPTGPPGKPGYGSPGPQGEPGMPGPPGQSATGKPGSPGLPGKPGDR
GLNGAKGDTGPAGLPGPRGPPGPPGLPGPAGISTPGKPGQQGPTGAPGPRGFPGETGVPG
TPGTNGRKGDRGYGVPGRPGERGLPGPQGPVGPPGPPGVGKRGENGFPGQPGIKGSPGSP
GEKGPAGPPGPPGPPGSRGPEGAGKPGATGAPGRPGIPGMKGLPGAPGMVGPPGPPGFGK
PGLPGLKGQRGPAGLPGEPGTRGEQGSAGRPGDPGPPGSSGNMGPPGPKGSPGQPGMPGP
KGEPGPVGPAGPPGARGEKGSPGLQGKPGPPGERGFSGSKGNPGLPGPKGEPGVRGPPGM
PGPAGPAGAKGVPGYKGEAGPRGAIGAPGITGPIGPPGIPGVPGTKGDRGAPGPPGPAGL
TTKGLKGPTGPPGPQGPRGYTGQRGPPGPPGPPGPPGPAGQAGVYSITGTDQSGSTKTRE
EPHYSGMSFGSTNQGVTGMPVSAFAAILAETYPLRGTPIAFDKIMYNKQQHYDPRTGIFT
CKIPGIYYFSYHMHVKGIQVWVALYKNTLPVMYSYVESTKGYMDQSSGSTILELKEKDQV
WVQMPHIAPNSLHSSKYADSTFLGFLVAPL
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atgttgccacatacagcccttctgctgctaatgtacctgaacttggtatatggaaggttt
catggacagcaataccaaacacctacaggcataaaaggcccactgcccaacaccggaaca
cagttcttcattccctatgccataaagagcaaaggcgtgtcagaaagaagagagccaggt
gttcctggcccgccaggcccccctggacctcgagggtaccaaggtccaactggaccacca
ggaaaaccaggttatggaagtcctggaccccaaggagaaccaggaatgccgggaccgcca
ggacagtcggcgacggggaagccaggttcaccaggcctccctgggaagccaggggacaga
gggctaaacggggcaaaaggagacactggcccggccggcttaccaggcccgcgggggcca
ccaggcccaccaggactccctggtcccgctggaatctccactccagggaaacctggacaa
cagggcccaacgggagcccctggccctcggggatttccgggagaaactggcgtgccggga
acccccggtacgaacggcaggaaaggcgacaggggctacggagttcctggacgcccgggg
gagaggggccttccgggccctcagggtcccgtggggccacccggccctccgggagtgggg
aaaagaggggaaaacgggttccccgggcagccaggcatcaaaggtagtccaggctctccc
ggagagaaggggccagctggcccgccaggcccgccaggccctcctgggagtcggggacca
gaaggcgcgggaaagccaggggccactggggccccgggccggcctgggattccaggaatg
aagggtctccctggggctccaggcatggtcggccccccggggcctccgggctttgggaaa
ccgggcttgccaggcctgaaagggcaaagaggacccgctggcctgccaggagagcctggt
accagaggcgaacagggttcagcaggacgtcctggagacccgggtccacccggaagctct
gggaatatgggtcccccgggaccaaaaggcagcccagggcagcccgggatgccaggcccg
aaaggagagccagggcctgtcgggcctgcaggaccccctggggccaggggagaaaagggg
tccccggggctacaaggaaaaccagggccaccaggagaacgcggcttcagtggctctaag
ggtaacccagggttaccaggccccaaaggtgaacctggagttaggggacctcctggtatg
cccggccctgcgggtccagcgggagctaagggagtgcctggatataaaggtgaggctggt
ccaagaggtgccattggggcacctggcatcacaggccccattgggccgccagggatccca
ggggttcctggaactaaaggggacagaggagctccaggccctcctggcccagctggttta
acaactaagggcctcaaaggacccactggacccccggggcctcaaggcccccgaggttat
acgggacagcgaggacccccagggccaccggggccaccggggcccccaggtcctgcaggt
caggcgggcgtgtacagtattacagggacagaccagtctggcagtacaaagacgagggaa
gagcctcattattctgggatgtcttttggcagcaccaaccagggcgtaactggcatgccc
gtgtcagctttcgctgccattctcgccgaaacttacccactaagaggtacgcccatagca
ttcgataaaattatgtataacaagcagcagcattatgacccaagaaccgggattttcacc
tgcaagatcccaggtatatactatttctcctaccacatgcacgtgaaagggatccaagtt
tgggtggctctctataagaacaccctgccagtaatgtactcctatgtggagtccaccaaa
ggctatatggatcagtcttcggggagcaccatcctggagctcaaggagaaggaccaggtg
tgggtccagatgcctcacattgcccccaacagcctgcactcctccaagtacgcagactcc
actttcttaggattcctggtggcgccactgtga
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