Stenotrophomonas aracearum: PDM28_03005
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Entry
PDM28_03005 CDS
T10111
Name
(GenBank) SDR family oxidoreductase
KO
K08678
UDP-glucuronate decarboxylase [EC:
4.1.1.35
]
Organism
sarc Stenotrophomonas aracearum
Pathway
sarc00520
Amino sugar and nucleotide sugar metabolism
sarc01100
Metabolic pathways
sarc01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
sarc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
PDM28_03005
Enzymes [BR:
sarc01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.35 UDP-glucuronate decarboxylase
PDM28_03005
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
NAD_binding_4
3Beta_HSD
RmlD_sub_bind
Polysacc_synt_2
adh_short
KR
NmrA
Motif
Other DBs
NCBI-ProteinID:
WNH49321
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Position
complement(664659..665618)
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AA seq
319 aa
AA seq
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MRSHDSTKRILVTGGAGFLGSHLIERLLGQGHEVVCADNLFTGTKRNIAHLLGNPHFEFL
RHDVTFPLYIEVDEIWNLACPASPVHYSHDPVQTTKTSVHGAINLLGLAKRLDCRIFQAS
TSEVYGDPSVHPQREEYWGNVNPIGPRSCYDEGKRCAETLFFDYHRQHGLDIKVARIFNT
YGPRMHPNDGRVVSNFIVQALRGENITIYGEGQQTRSFCYVDDLIEGFIRLMATDKDFTG
PVNLGNPAEMTIRELAEAVIALTNSGSKLVFKPLPQDDPMQRQPDITLAKSKLGGWEPQV
KLEDGLRRTIAYFDGLLSA
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgagaagtcatgacagcaccaagcgcatcctggtcaccggcggtgcgggtttcctcggc
tcgcacctgatcgagcgcctgctcggccagggccacgaagtggtctgcgcggacaacctg
ttcaccggcaccaagcgcaacatcgcgcacctgctgggcaacccgcacttcgaattcctg
cgccacgacgtcaccttcccgctgtatatcgaagtggacgagatctggaacctggcctgc
cccgcctcgccggtgcattacagccatgacccggtgcagaccaccaagacctcggtccat
ggcgcgatcaacctgctgggactggccaagcggctggactgccggatcttccaggcgtcc
accagcgaggtctatggcgacccgagcgtgcacccgcagcgcgaggaatactggggcaac
gtgaacccgatcggcccgcgctcctgctatgacgaaggcaaacgctgtgcggagacgttg
ttcttcgattaccaccgccagcatgggctggacatcaaggtggcgcgcatcttcaacacg
tatggtccgcgcatgcacccgaatgatgggcgcgtggtgtcgaacttcatcgtgcaggcg
ttgcgcggcgagaacatcaccatctacggcgaggggcagcagacgcgttcgttctgctat
gtggatgacctgattgaagggttcatccggttgatggccaccgataaggacttcaccggc
ccggtcaacctgggcaacccggccgagatgaccattcgcgagctggccgaggcggtgatt
gcgttgaccaattcgggctcgaagctggtgttcaaaccgttgccgcaggatgacccgatg
cagcgccagccggatatcaccttggcgaagagcaagctgggtggttgggagccgcaggtg
aagctggaggatgggcttcgacggacgattgcgtattttgatgggttgttgagcgcctga
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