Stenotrophomonas aracearum: PDM28_03100
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Entry
PDM28_03100 CDS
T10111
Symbol
xerD
Name
(GenBank) site-specific tyrosine recombinase XerD
KO
K04763
integrase/recombinase XerD
Organism
sarc Stenotrophomonas aracearum
Brite
KEGG Orthology (KO) [BR:
sarc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sarc03036
]
PDM28_03100 (xerD)
Chromosome and associated proteins [BR:
sarc03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
PDM28_03100 (xerD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_int_SAM_4
ATP-synt_VA_C
MrpR_C_cat
Motif
Other DBs
NCBI-ProteinID:
WNH49338
UniProt:
A0ABY9YF64
LinkDB
All DBs
Position
683788..684765
Genome browser
AA seq
325 aa
AA seq
DB search
MSTPSTPAARRQLVQHLPELRADDAASIRHFLDAIWAEQGLARASLDSYRRDLEGLARWR
DGTGGGLAGIDRAGLFDYLAWRAKHGWSPRSNARLLSALRAFYGDALRRGLRSEDPSALL
DPPRLPRLLPKALAESQIDALLAAPDVEQPLGLRDRAMLELMYAAGLRVSELVDLPANAV
NLRQGVLRVTGKGSKERLVPLGEESQHWLERYLQQARPQITGTRSVPAARDGSVPLFLEL
SLHPLSRQQFWALVKKYAVLAGIDPVRISPHGLRHSFATHLLNRGADLRALQMLLGHSSL
STTQIYTLVAREHLQKLHAKHHPRG
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccccttcaacacccgccgcgcgccgccagctggtgcagcacctgcccgaactg
cgtgccgacgacgccgcctcgatccgccacttcctcgacgcgatctgggccgagcagggc
ttggcccgggccagcctggacagctatcggcgcgacctggaagggctggcgcgctggcgc
gacggcaccggcggtggcctggccggcatcgaccgcgccggcctgttcgattacctggcc
tggcgcgcgaagcacggctggtcgccgcgcagcaatgcgcgactgctgtcggcgctgcgt
gcgttctacggcgacgccctgcggcgcgggctgcgcagcgaagaccccagtgcgctgctg
gacccgccgcggctgccgcggctgctgcccaaggcgctcgccgaaagccagatcgacgcg
ctgctggccgcgcccgacgtggagcagccactcggcctgcgcgaccgcgccatgctcgaa
ctgatgtacgccgccggcctgcgcgtgagcgagctggtggacctgccggccaacgcggtc
aacctgcgccagggcgtgctgcgggtgaccggcaagggcagcaaggaacggctggtgccg
ctgggcgaggaatcccagcactggctggagcgctacctgcagcaggcgcggccgcagatc
accggcacccgcagcgtaccggccgcccgcgacggcagcgtgccgctgttccttgaactg
tcactgcatccgctgagccggcagcagttctgggcgctggtgaagaagtacgccgtgctg
gccgggatcgacccggtgcggatcagcccgcacggcctgcgccacagtttcgccacccac
ctgctcaaccgtggcgcggacctgcgcgcgctgcagatgctgctcggccacagctcattg
tccaccacccagatctacaccctggtcgcgcgcgagcatctgcagaagctgcacgcgaag
caccatccgcgcggttag
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