Stenotrophomonas aracearum: PDM28_03195
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Entry
PDM28_03195 CDS
T10111
Symbol
gspD
Name
(GenBank) type II secretion system secretin GspD
KO
K02453
general secretion pathway protein D
Organism
sarc Stenotrophomonas aracearum
Pathway
sarc03070
Bacterial secretion system
Brite
Secretion system [BR:
sarc02044
]
Type II secretion system
General secretion pathway protein
PDM28_03195 (gspD)
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
WNH49354
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Position
712901..715102
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AA seq
733 aa
AA seq
DB search
MTLRLFSLSFAVALLAGCASVPAPEVQRNAILTGKHQVVAGDGSRDGVDAQPLGDGAPQP
VIRRGSGTMINRSAAAAPSPALSQASTGTATFNFEGESVHAVVKAILGDMLGQNYVIAPG
VQGTVTLATPKPVSSAQALNLLEMVLGWNNARMVYSGGRYNIVAADQALAGTVAPSTAPA
ANARGFEVRVVPLQYISATEMKKVLEPYARPNAIVNVDGGRNVITLGGTRAELENYLRTV
EIFDVDWLSGMSVGVFPIQTGKAEQVAADLEKVFGEESKTPSAGMFRFLPLENANAVLVI
TPQARYLDQIQQWLERIDTAGGSARLFSYELRYIKAKDLAERLAEAFASENGRGGRSFDT
SLAPGATIQNLSSQDGTGGSSLNSGNASTGGTNRTGGMGEGTMSLPQRQSGNASFNLEVQ
GDSVGVSAVEETNTLLVRSTPQAWRSIREVIEKLDVMPMQVHIEAQVAEVALTGDLSYGV
NWFFEQAVQTGKTESGIDLPSALGRSIWGSISGRVGDTGLGWTFLGKNAAAVVTALDKVS
NLRLLQTPSIFVRNNAEATLNVGTQIPINSVSVNTGVGGDNTYSQVQYLDTGVILKVRPR
ITRDGVVFLDIVQEVSSAGAIPSGCDPTRTTCNPPINTRKISTEAAVQSGDTIMLAGLIT
NNDETGADGVPGLSRIPVLGALFGKKTQVSGRSEVIVLLTPTIVRNAQESRNLTDEYSNR
FRAMEPFPARPKR
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgacattgcgtcttttctccctgtcgttcgccgtcgccctgcttgcaggctgcgcttcc
gtgcctgcccccgaagtgcagcgcaatgcgatcctcaccggcaagcaccaggtcgtggcc
ggcgacggttcgcgtgacggcgtggacgcgcagccgctgggcgacggtgccccgcagccg
gtgatccgccgtggcagcggcaccatgatcaaccgcagcgcggcggcggcaccgtcgccg
gcgttgtcgcaggcgagcaccggcaccgccaccttcaacttcgaaggcgagtcggtgcac
gcggtggtcaaggcgatcctgggcgacatgctcggccagaactacgtgatcgcccccggc
gtgcagggcaccgtgaccttggccacgcccaagccggtgtcttcggcgcaggcgctgaac
ctgctggaaatggtgctgggctggaacaacgcgcgcatggtctacagcggcggccgctac
aacatcgtggccgccgaccaggcgctggccggcaccgtggcgccgagcaccgcaccggcc
gccaacgcgcgcggcttcgaagtgcgggtggtgccgctgcagtacatctcggccactgaa
atgaagaaggtgctggagccgtacgcgcggcccaacgcgatcgtcaatgtcgacggcggc
cgcaacgtgatcaccctgggcggcacccgcgcggagcttgagaactacctgcgcacggtg
gagatcttcgacgtggactggctgtcgggcatgtcggtgggcgtgttcccgatccagacc
ggcaaggccgagcaggtggccgccgacctggaaaaagtgttcggtgaagagagcaagacc
cccagtgccggcatgttccgtttcctcccgctggaaaacgccaacgccgtgctggtgatc
accccgcaggcgcgctacctggaccagatccagcagtggctggagcggatcgacaccgcc
ggtggcagcgcgcggctgttctcctacgagctgcgctacatcaaggccaaggacctggcc
gaacgcctggccgaagccttcgccagtgaaaacgggcgcggggggcggagcttcgacacc
tcgctggcgccgggcgcgaccatccagaacctgagcagccaggatggcaccggcggctcc
agcctcaacagcggtaacgccagcaccggtggcaccaaccgcaccggcggcatgggcgaa
ggcaccatgagcctgccgcagcgccagtccggcaacgccagcttcaacctggaagtgcag
ggcgattcggtcggcgtttccgcggtcgaggaaaccaacacgctgctggtgcgctccacc
ccgcaggcctggcggtcgatccgcgaggtgatcgaaaagctcgacgtgatgccgatgcag
gtgcacatcgaagcgcaggtggccgaagtggcgctgaccggcgacctcagctacggcgtg
aactggttcttcgaacaggcggtgcagaccggcaagaccgaaagcggcatcgacctgccc
agcgcgctgggccgttcgatctggggcagcatttccggccgggtcggcgacaccgggctg
ggctggaccttcctcggcaagaatgcggcggcggtggtgaccgcgctggacaaggtcagc
aacctgcgcctgctgcagaccccgtcgatcttcgtgcgcaacaatgccgaagccaccctc
aacgtgggtacccagatcccgatcaactcggtgtcggtgaacaccggcgtcggtggcgac
aacacctacagccaggtccagtacctggacactggcgtgatcctcaaggtgcgcccgcgc
atcacccgcgacggcgtggtgttcctggacatcgtgcaggaggtcagttcggccggcgca
attccgtccggttgcgacccgacccgcaccacctgcaacccgccgatcaacacccgcaag
atctccaccgaagcggcggtgcagagcggcgacaccatcatgctggccgggttgatcacc
aacaacgacgaaaccggcgccgacggcgtgccggggctgagccggatcccggtgctcggc
gccctgttcggcaagaagacccaggtcagcgggcgttcggaggtgatcgtgctgctcacc
ccgaccatcgtgcgcaacgcgcaggagtcgcggaacctgaccgacgaatacagcaaccgc
ttccgcgcgatggagccgttcccggcccgcccgaagcgctga
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